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The map label for this gene is yrvN [H]

Identifier: 187734543

GI number: 187734543

Start: 35058

End: 36437

Strand: Reverse

Name: yrvN [H]

Synonym: Amuc_0027

Alternate gene names: 187734543

Gene position: 36437-35058 (Counterclockwise)

Preceding gene: 187734544

Following gene: 187734537

Centisome position: 1.37

GC content: 61.09

Gene sequence:

>1380_bases
ATGGATTTGTTCAGTTTACAGGAAGAGGAAGCGCGGGAAGGCTTTGAGCCCGGGGCGGACACTTCCGCCATGCCGCTGGC
CGCGCGCATGCGCCCGCGCACCCTGGATGAAGTGGCCGGGCAGAAGCATCTGCTGGCTCCGGGTAAGCTGCTGAGACGGG
CAATTGAGACGGACCGGTTTACGTCCCTGATTTTCTACGGGCCTCCCGGGTGCGGAAAAACTACTCTGGCCGCCGTCATC
GCCCGGACGACGAATGCCCATTTCATGATGCTCAATGGCGTGGAATCCAATGTAGCGGACATCCGGGAAAAAATAGCCCA
GGCGCAGATGAGGATGAGCATGCACGGGCGGAAAACCGTTCTTTTCGTGGATGAGCTGCACCGGTTCAACAAGGCTCAAC
AGGATGTTCTGCTTCCCCATCTGGAAAAGGGTACGGTCAGGTTTATCGGGGCGACCACGGAAAATCCCTATTTTGCGATT
AACTCCCCCCTCCTGTCCCGTTCCCAGGTTTTTCCGATGGAGCCGGTGCCGGAGGAGGAGCTGGCCGCCCTGCTGAAGCG
CGCCCTGGCGGATGAGGTGCGCGGGCTGGGCGCATCCCGCGTGGATATGGAGGCGGAAGCCCTGAACCATTTGGCCGCCA
AAGCGGACGGAGACGCCAGGAAGGCGCTCACGGCTCTGGAAGTGGCTGTTCTGTCCACTCCTGCGGGGAAAGACGGCGTC
ATTCATGTGGACATCTCCGTAGCGGAGGAATCCATCCAGCGCAAGGCTATCAGGTACGATCGCCTGGGGGATTCCCATTA
CGATACGATTTCCGCTTTCATCAAATCCATGCGCGGCTCTGACCCGGACGCCGCCCTGTATTGGCTGGGGATGATGCTGG
AAGCCGGGGAGGATATCCGCTTTATAGGAAGAAGGCTGGTCATCGCCGCGTCGGAGGATGTAGGGCTGGCGGATTCCAAC
GCCCTGCGCGTAGCTTTGGACGCGGCGCGCGCGGCGGAAATGGTCGGCATGCCGGAAGCACGCATTCCTCTGGCGCATGC
TGCGGTTTACCTGGCGACGGCCCCCAAGAGCAATTCCGCCTACATGGGCATCAATGCCGCTATGGATGACGTGCGCAATG
GGAAAACGCTGGCAGTGCCGGAACACCTGCGGACGCCAACGCGCAAGAAGCTGGCTGCCGCCGGAGGCGCGGATGCCGCC
AGGCTGGAATACCTGTATTCCCACGACTATCCGGAACATTACGTACCCCAGGCCTACCTCCCGGAAGGCCGCGTGTATTA
CACCCCCACCGGAAACGGGCTGGAACTGAGGATCAGGGAACGCATGGAATACCGCCGTCAACTGGCGGAGAACGCCGGGG
AAGGCGGGAAGAAGGGGTAA

Upstream 100 bases:

>100_bases
TTTTCCGTCCTGAGGGGGGGAACGGTGTCGCTTCCGCAAACTTTCAGGATTCCGGGGATTGGCCTTTTCTCCGGCCTTTC
AACCGGGTAAAGTGTTTCCG

Downstream 100 bases:

>100_bases
TTCTTCCTTGAAAACGCGGGAATGAGAAGAAGGTTTCCCTTATTGCTCCTTTGAAGCTGCCGGGAATGTTGTTCGGCTTT
GGCCGGCAAGAAGCAGGGAG

Product: ATPase AAA

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 459; Mature: 459

Protein sequence:

>459_residues
MDLFSLQEEEAREGFEPGADTSAMPLAARMRPRTLDEVAGQKHLLAPGKLLRRAIETDRFTSLIFYGPPGCGKTTLAAVI
ARTTNAHFMMLNGVESNVADIREKIAQAQMRMSMHGRKTVLFVDELHRFNKAQQDVLLPHLEKGTVRFIGATTENPYFAI
NSPLLSRSQVFPMEPVPEEELAALLKRALADEVRGLGASRVDMEAEALNHLAAKADGDARKALTALEVAVLSTPAGKDGV
IHVDISVAEESIQRKAIRYDRLGDSHYDTISAFIKSMRGSDPDAALYWLGMMLEAGEDIRFIGRRLVIAASEDVGLADSN
ALRVALDAARAAEMVGMPEARIPLAHAAVYLATAPKSNSAYMGINAAMDDVRNGKTLAVPEHLRTPTRKKLAAAGGADAA
RLEYLYSHDYPEHYVPQAYLPEGRVYYTPTGNGLELRIRERMEYRRQLAENAGEGGKKG

Sequences:

>Translated_459_residues
MDLFSLQEEEAREGFEPGADTSAMPLAARMRPRTLDEVAGQKHLLAPGKLLRRAIETDRFTSLIFYGPPGCGKTTLAAVI
ARTTNAHFMMLNGVESNVADIREKIAQAQMRMSMHGRKTVLFVDELHRFNKAQQDVLLPHLEKGTVRFIGATTENPYFAI
NSPLLSRSQVFPMEPVPEEELAALLKRALADEVRGLGASRVDMEAEALNHLAAKADGDARKALTALEVAVLSTPAGKDGV
IHVDISVAEESIQRKAIRYDRLGDSHYDTISAFIKSMRGSDPDAALYWLGMMLEAGEDIRFIGRRLVIAASEDVGLADSN
ALRVALDAARAAEMVGMPEARIPLAHAAVYLATAPKSNSAYMGINAAMDDVRNGKTLAVPEHLRTPTRKKLAAAGGADAA
RLEYLYSHDYPEHYVPQAYLPEGRVYYTPTGNGLELRIRERMEYRRQLAENAGEGGKKG
>Mature_459_residues
MDLFSLQEEEAREGFEPGADTSAMPLAARMRPRTLDEVAGQKHLLAPGKLLRRAIETDRFTSLIFYGPPGCGKTTLAAVI
ARTTNAHFMMLNGVESNVADIREKIAQAQMRMSMHGRKTVLFVDELHRFNKAQQDVLLPHLEKGTVRFIGATTENPYFAI
NSPLLSRSQVFPMEPVPEEELAALLKRALADEVRGLGASRVDMEAEALNHLAAKADGDARKALTALEVAVLSTPAGKDGV
IHVDISVAEESIQRKAIRYDRLGDSHYDTISAFIKSMRGSDPDAALYWLGMMLEAGEDIRFIGRRLVIAASEDVGLADSN
ALRVALDAARAAEMVGMPEARIPLAHAAVYLATAPKSNSAYMGINAAMDDVRNGKTLAVPEHLRTPTRKKLAAAGGADAA
RLEYLYSHDYPEHYVPQAYLPEGRVYYTPTGNGLELRIRERMEYRRQLAENAGEGGKKG

Specific function: Unknown

COG id: COG2256

COG function: function code L; ATPase related to the helicase subunit of the Holliday junction resolvase

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the AAA ATPase family [H]

Homologues:

Organism=Homo sapiens, GI18426902, Length=435, Percent_Identity=43.448275862069, Blast_Score=310, Evalue=2e-84,
Organism=Homo sapiens, GI18426904, Length=435, Percent_Identity=39.7701149425287, Blast_Score=259, Evalue=3e-69,
Organism=Homo sapiens, GI4506491, Length=223, Percent_Identity=29.1479820627803, Blast_Score=71, Evalue=3e-12,
Organism=Homo sapiens, GI31881687, Length=223, Percent_Identity=29.1479820627803, Blast_Score=71, Evalue=3e-12,
Organism=Escherichia coli, GI1787119, Length=439, Percent_Identity=43.2801822323462, Blast_Score=329, Evalue=2e-91,
Organism=Saccharomyces cerevisiae, GI6324111, Length=444, Percent_Identity=35.8108108108108, Blast_Score=256, Evalue=6e-69,
Organism=Saccharomyces cerevisiae, GI6324039, Length=262, Percent_Identity=27.0992366412214, Blast_Score=74, Evalue=6e-14,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003593
- InterPro:   IPR008824
- InterPro:   IPR021886 [H]

Pfam domain/function: PF12002 MgsA_C; PF05496 RuvB_N [H]

EC number: NA

Molecular weight: Translated: 50238; Mature: 50238

Theoretical pI: Translated: 6.66; Mature: 6.66

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.2 %Cys     (Translated Protein)
3.9 %Met     (Translated Protein)
4.1 %Cys+Met (Translated Protein)
0.2 %Cys     (Mature Protein)
3.9 %Met     (Mature Protein)
4.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDLFSLQEEEAREGFEPGADTSAMPLAARMRPRTLDEVAGQKHLLAPGKLLRRAIETDRF
CCCCCCCHHHHHCCCCCCCCCCCCCHHHHCCCCCHHHHCCCCEECCHHHHHHHHHHHCCC
TSLIFYGPPGCGKTTLAAVIARTTNAHFMMLNGVESNVADIREKIAQAQMRMSMHGRKTV
EEEEEECCCCCCHHHHHHHHHHCCCCEEEEEECCCCCHHHHHHHHHHHHHHHHHCCCEEE
LFVDELHRFNKAQQDVLLPHLEKGTVRFIGATTENPYFAINSPLLSRSQVFPMEPVPEEE
EEHHHHHHHCHHHHHHHCCCCCCCCEEEEEECCCCCEEEECCCCCCCCCCCCCCCCCHHH
LAALLKRALADEVRGLGASRVDMEAEALNHLAAKADGDARKALTALEVAVLSTPAGKDGV
HHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHCCCCHHHHHHHHHHHHHEECCCCCCCE
IHVDISVAEESIQRKAIRYDRLGDSHYDTISAFIKSMRGSDPDAALYWLGMMLEAGEDIR
EEEEEHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHCCCCCCHHHHHHHHHHHCCCCHH
FIGRRLVIAASEDVGLADSNALRVALDAARAAEMVGMPEARIPLAHAAVYLATAPKSNSA
EECCEEEEEECCCCCCCCCCCEEEEHHHHHHHHHHCCCCCCCCHHHHEEEEEECCCCCCE
YMGINAAMDDVRNGKTLAVPEHLRTPTRKKLAAAGGADAARLEYLYSHDYPEHYVPQAYL
EEEEHHHHHHHCCCCEEECCHHHCCCHHHHHHHCCCCCHHHHHHHHCCCCCHHCCCCCCC
PEGRVYYTPTGNGLELRIRERMEYRRQLAENAGEGGKKG
CCCEEEECCCCCCEEEEHHHHHHHHHHHHHCCCCCCCCC
>Mature Secondary Structure
MDLFSLQEEEAREGFEPGADTSAMPLAARMRPRTLDEVAGQKHLLAPGKLLRRAIETDRF
CCCCCCCHHHHHCCCCCCCCCCCCCHHHHCCCCCHHHHCCCCEECCHHHHHHHHHHHCCC
TSLIFYGPPGCGKTTLAAVIARTTNAHFMMLNGVESNVADIREKIAQAQMRMSMHGRKTV
EEEEEECCCCCCHHHHHHHHHHCCCCEEEEEECCCCCHHHHHHHHHHHHHHHHHCCCEEE
LFVDELHRFNKAQQDVLLPHLEKGTVRFIGATTENPYFAINSPLLSRSQVFPMEPVPEEE
EEHHHHHHHCHHHHHHHCCCCCCCCEEEEEECCCCCEEEECCCCCCCCCCCCCCCCCHHH
LAALLKRALADEVRGLGASRVDMEAEALNHLAAKADGDARKALTALEVAVLSTPAGKDGV
HHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHCCCCHHHHHHHHHHHHHEECCCCCCCE
IHVDISVAEESIQRKAIRYDRLGDSHYDTISAFIKSMRGSDPDAALYWLGMMLEAGEDIR
EEEEEHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHCCCCCCHHHHHHHHHHHCCCCHH
FIGRRLVIAASEDVGLADSNALRVALDAARAAEMVGMPEARIPLAHAAVYLATAPKSNSA
EECCEEEEEECCCCCCCCCCCEEEEHHHHHHHHHHCCCCCCCCHHHHEEEEEECCCCCCE
YMGINAAMDDVRNGKTLAVPEHLRTPTRKKLAAAGGADAARLEYLYSHDYPEHYVPQAYL
EEEEHHHHHHHCCCCEEECCHHHCCCHHHHHHHCCCCCHHHHHHHHCCCCCHHCCCCCCC
PEGRVYYTPTGNGLELRIRERMEYRRQLAENAGEGGKKG
CCCEEEECCCCCCEEEEHHHHHHHHHHHHHCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: DNA [C]

Specific reaction: Protein + DNA = Protein-DNA [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 9384377 [H]