| Definition | Burkholderia phymatum STM815 chromosome chromosome 1, complete sequence. |
|---|---|
| Accession | NC_010622 |
| Length | 3,479,187 |
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The map label for this gene is 186477807
Identifier: 186477807
GI number: 186477807
Start: 3438877
End: 3439521
Strand: Reverse
Name: 186477807
Synonym: Bphy_3063
Alternate gene names: NA
Gene position: 3439521-3438877 (Counterclockwise)
Preceding gene: 186477808
Following gene: 186477806
Centisome position: 98.86
GC content: 63.88
Gene sequence:
>645_bases ATGAGCGAAGGCGTATACGGAGAGCAGGCAACCGGGCGGGTGACCCACAGCCTGCTGCGACTCAGCACGGCCATGCGGAG CCAGGCATGGGAATGGGCGGAAGGCGCAGGGCTGACGCCTACCCAAGGCGAGATCCTGGTGCTGCTGATGCAGCGCAAGG GGCCGATGCGTCTCGGCGAGATTGCCCGCGAAACCGCGCTGACGGCCGCGACCACGAGCGATGCCGTGAGCACGCTGGAA AACAAGGGGCTCGTGGAAAAGCGTCGTGCGCTCGACGACGGGCGCGCGCTTGCCGTGCGTCTGACGGCACGCGGCCGCAC GGCTGCAAAACGCGCCGCGCAATGGCCGGACTTCCTTGCGAAAGCAGTCGGCACCCTGCGCGACGAAGAGCAATCGATTT TCTATCGCACGCTCCTGAAGACCGTGCGTCAGCTCGAAGTGCAAGGCCATATTCCGCCGCACCGGATGTGCGTGACGTGC ACGCATTTCGAGCCGAGCAAGAATCCGAAGAAATCGCTGCATCGCTGCATGCTGCTCGACCTGTCGATGTCGGATACCGA TCTGCGTCTGGACTGCTCGGTGCACGAAACAGCCGACGCGGCCACGCAGAAAAAGACCTGGAAGATCTTCGCGCAGCAAG CCTGA
Upstream 100 bases:
>100_bases GGGTTTTCCGGCGAAGCTTCCCCCCACGGACTGCCGGCGCGGGCATCGCAGATCGGGTGTCGACGGGCGACGGCATGCTG TCAACAACGAACGAAAGACT
Downstream 100 bases:
>100_bases GTCGGCTAAACTGCGGAGCCTGCTGCCGCTCGCGAACACTCGCGAACGGCAGCAGGTGAGCTTGCGCCGTCTTGCGCATC GGCAGACGCGCGTGTCTTCC
Product: MarR family transcriptional regulator
Products: NA
Alternate protein names: Transcriptional Regulator MarR Family; Transcriptional Regulator
Number of amino acids: Translated: 214; Mature: 213
Protein sequence:
>214_residues MSEGVYGEQATGRVTHSLLRLSTAMRSQAWEWAEGAGLTPTQGEILVLLMQRKGPMRLGEIARETALTAATTSDAVSTLE NKGLVEKRRALDDGRALAVRLTARGRTAAKRAAQWPDFLAKAVGTLRDEEQSIFYRTLLKTVRQLEVQGHIPPHRMCVTC THFEPSKNPKKSLHRCMLLDLSMSDTDLRLDCSVHETADAATQKKTWKIFAQQA
Sequences:
>Translated_214_residues MSEGVYGEQATGRVTHSLLRLSTAMRSQAWEWAEGAGLTPTQGEILVLLMQRKGPMRLGEIARETALTAATTSDAVSTLE NKGLVEKRRALDDGRALAVRLTARGRTAAKRAAQWPDFLAKAVGTLRDEEQSIFYRTLLKTVRQLEVQGHIPPHRMCVTC THFEPSKNPKKSLHRCMLLDLSMSDTDLRLDCSVHETADAATQKKTWKIFAQQA >Mature_213_residues SEGVYGEQATGRVTHSLLRLSTAMRSQAWEWAEGAGLTPTQGEILVLLMQRKGPMRLGEIARETALTAATTSDAVSTLEN KGLVEKRRALDDGRALAVRLTARGRTAAKRAAQWPDFLAKAVGTLRDEEQSIFYRTLLKTVRQLEVQGHIPPHRMCVTCT HFEPSKNPKKSLHRCMLLDLSMSDTDLRLDCSVHETADAATQKKTWKIFAQQA
Specific function: Unknown
COG id: COG1846
COG function: function code K; Transcriptional regulators
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 23786; Mature: 23654
Theoretical pI: Translated: 9.91; Mature: 9.91
Prosite motif: PS50995 HTH_MARR_2
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.9 %Cys (Translated Protein) 3.3 %Met (Translated Protein) 5.1 %Cys+Met (Translated Protein) 1.9 %Cys (Mature Protein) 2.8 %Met (Mature Protein) 4.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSEGVYGEQATGRVTHSLLRLSTAMRSQAWEWAEGAGLTPTQGEILVLLMQRKGPMRLGE CCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCHHCCCCCCCCCCCEEEEEECCCCCCHHHH IARETALTAATTSDAVSTLENKGLVEKRRALDDGRALAVRLTARGRTAAKRAAQWPDFLA HHHHHHHHHHHHHHHHHHHHHCCHHHHHHHCCCCCEEEEEEECCCCHHHHHHHCCHHHHH KAVGTLRDEEQSIFYRTLLKTVRQLEVQGHIPPHRMCVTCTHFEPSKNPKKSLHRCMLLD HHHHHHCCHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEEEECCCCCCCHHHHHHHHHHEE LSMSDTDLRLDCSVHETADAATQKKTWKIFAQQA CCCCCCCEEEECCCHHHHHHHHHHHHHHEEECCC >Mature Secondary Structure SEGVYGEQATGRVTHSLLRLSTAMRSQAWEWAEGAGLTPTQGEILVLLMQRKGPMRLGE CCCCCCCCHHHHHHHHHHHHHHHHHHHCCCHHCCCCCCCCCCCEEEEEECCCCCCHHHH IARETALTAATTSDAVSTLENKGLVEKRRALDDGRALAVRLTARGRTAAKRAAQWPDFLA HHHHHHHHHHHHHHHHHHHHHCCHHHHHHHCCCCCEEEEEEECCCCHHHHHHHCCHHHHH KAVGTLRDEEQSIFYRTLLKTVRQLEVQGHIPPHRMCVTCTHFEPSKNPKKSLHRCMLLD HHHHHHCCHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEEEECCCCCCCHHHHHHHHHHEE LSMSDTDLRLDCSVHETADAATQKKTWKIFAQQA CCCCCCCEEEECCCHHHHHHHHHHHHHHEEECCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA