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The map label for this gene is bkdR [H]

Identifier: 186477798

GI number: 186477798

Start: 3431579

End: 3432070

Strand: Reverse

Name: bkdR [H]

Synonym: Bphy_3054

Alternate gene names: 186477798

Gene position: 3432070-3431579 (Counterclockwise)

Preceding gene: 186477800

Following gene: 186477795

Centisome position: 98.65

GC content: 64.02

Gene sequence:

>492_bases
ATGTTGGAACTCGATCACTTCGACCTCGCGCTGCTCGACGTCCTGCAGCGCTTCGGGCGCGCGACGCATCAGCAGCTCGG
CGAGCAGGTGCCGCTATCACCTTCGCAGATCGGGCGGCGGCTGCAGCGGTTGGAGGCGATCGGCGTGGTTGACGGCTATC
GCGTCGTGCTGCGGCCGGAGAAGCTCGGACTCGGCGTGATGGCGTTCACCAGCCTCAAATTGAAGCACCACGGCGATTCG
ATCATCGAGCAGTTCCAGCAGCAGATCGACGTCCTGCCGGAGGTGCTGGAATGTCACGCGGTGGTGGGCGACGCCGACTA
TCTGCTGCGCATCGTGGCGCCCGATCTGAACGCGCTGTCGTCGTTCGTGATGAAGAAGCTGATGCGCGTGCCGGGCGTCG
ACAGCGTGCGCTCGAACATCGTTCTGACGACATTCAAGCGCAACGGGCCATTGCCGCTCGGTCATCTGGCGCCGGGTGCA
TCCACTGAGTGA

Upstream 100 bases:

>100_bases
TCATCGTGTCACCTTAGAAGCTGCGTGGGACGCAAGTTTTCCGAACCAAGGTGAATGCGATAATCCCGCATCGAAACGCC
CATCCATGCGGAGATTTTTC

Downstream 100 bases:

>100_bases
CCGCGCAGCGTGACGTGATCACGCAGCCTTTAACGGTTCGTCATTCAGCATATCCACATACGCGACGGCGACGAGATCCG
ACTCGGGCACGCCGAGCTTG

Product: AsnC family transcriptional regulator

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 163; Mature: 163

Protein sequence:

>163_residues
MLELDHFDLALLDVLQRFGRATHQQLGEQVPLSPSQIGRRLQRLEAIGVVDGYRVVLRPEKLGLGVMAFTSLKLKHHGDS
IIEQFQQQIDVLPEVLECHAVVGDADYLLRIVAPDLNALSSFVMKKLMRVPGVDSVRSNIVLTTFKRNGPLPLGHLAPGA
STE

Sequences:

>Translated_163_residues
MLELDHFDLALLDVLQRFGRATHQQLGEQVPLSPSQIGRRLQRLEAIGVVDGYRVVLRPEKLGLGVMAFTSLKLKHHGDS
IIEQFQQQIDVLPEVLECHAVVGDADYLLRIVAPDLNALSSFVMKKLMRVPGVDSVRSNIVLTTFKRNGPLPLGHLAPGA
STE
>Mature_163_residues
MLELDHFDLALLDVLQRFGRATHQQLGEQVPLSPSQIGRRLQRLEAIGVVDGYRVVLRPEKLGLGVMAFTSLKLKHHGDS
IIEQFQQQIDVLPEVLECHAVVGDADYLLRIVAPDLNALSSFVMKKLMRVPGVDSVRSNIVLTTFKRNGPLPLGHLAPGA
STE

Specific function: Positive regulator of the bkd operon for branched-chain keto acid dehydrogenase complex [H]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 HTH asnC-type DNA-binding domain [H]

Homologues:

Organism=Escherichia coli, GI1787116, Length=149, Percent_Identity=34.8993288590604, Blast_Score=104, Evalue=3e-24,
Organism=Escherichia coli, GI87081742, Length=150, Percent_Identity=34, Blast_Score=92, Evalue=2e-20,
Organism=Escherichia coli, GI1790182, Length=139, Percent_Identity=24.4604316546763, Blast_Score=61, Evalue=3e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR011008
- InterPro:   IPR000485
- InterPro:   IPR019885
- InterPro:   IPR019888
- InterPro:   IPR019887
- InterPro:   IPR011991 [H]

Pfam domain/function: PF01037 AsnC_trans_reg [H]

EC number: NA

Molecular weight: Translated: 18008; Mature: 18008

Theoretical pI: Translated: 7.16; Mature: 7.16

Prosite motif: PS50956 HTH_ASNC_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
2.5 %Met     (Translated Protein)
3.1 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
2.5 %Met     (Mature Protein)
3.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLELDHFDLALLDVLQRFGRATHQQLGEQVPLSPSQIGRRLQRLEAIGVVDGYRVVLRPE
CCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHCCCCCEEEEEEHH
KLGLGVMAFTSLKLKHHGDSIIEQFQQQIDVLPEVLECHAVVGDADYLLRIVAPDLNALS
HHCCHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHCCCHHHHH
SFVMKKLMRVPGVDSVRSNIVLTTFKRNGPLPLGHLAPGASTE
HHHHHHHHHCCCCCHHHCCEEEEEECCCCCCCCCCCCCCCCCC
>Mature Secondary Structure
MLELDHFDLALLDVLQRFGRATHQQLGEQVPLSPSQIGRRLQRLEAIGVVDGYRVVLRPE
CCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHCCCCCEEEEEEHH
KLGLGVMAFTSLKLKHHGDSIIEQFQQQIDVLPEVLECHAVVGDADYLLRIVAPDLNALS
HHCCHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHCCCHHHHH
SFVMKKLMRVPGVDSVRSNIVLTTFKRNGPLPLGHLAPGASTE
HHHHHHHHHCCCCCHHHCCEEEEEECCCCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8320210 [H]