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The map label for this gene is 186477757

Identifier: 186477757

GI number: 186477757

Start: 3378492

End: 3379487

Strand: Reverse

Name: 186477757

Synonym: Bphy_3011

Alternate gene names: NA

Gene position: 3379487-3378492 (Counterclockwise)

Preceding gene: 186477758

Following gene: 186477756

Centisome position: 97.13

GC content: 60.44

Gene sequence:

>996_bases
ATGTTGGACAACAAGTCAATTTTGATTACGGGTGGCACGGGTTCCTTCGGCCACAAGTTCATTTCTGCCGTGCTGGCGCA
ATACAAGCCATCGCGCGTCGTCGTGTTTTCGCGCGACGAGCTCAAGCAATACGAGATGCAGCAGAAGTTCGACGCGCCGT
GCATGCGCTACTTCCTCGGCGACGTGCGCGACGCCGAGCGCCTGCGCCAGGCGATGCGCGGTATCGACTACGTGGTGCAC
GCCGCCGCGCTCAAGCAGGTTCCCGCCGCCGAATACAACCCGACGGAATGCATTCGCACGAACGTGACGGGCGCGGAAAA
CGTGATCAATGCCGCGATCGAAAACGGCGTCGAAAAAGTGATCGCGCTATCCACGGACAAGGCCGCCAGCCCAATCAATC
TGTATGGCGCGACCAAGCTGCTGTCCGACAAGCTCTTCGTAGCGGCGAACAATCTGGTCGGCAAGCATCGCACGCGCTTC
GCCGTGGTGCGCTATGGCAACGTGGTCGGTTCGCGCGGATCAGTGGTGCCGTTCTTCCGCAAGCTGGTCGCCGACGGTTC
AAAGAGTCTGCCCATCACCGATCAGCGCATGACGCGCTTCTGGATCACGCTCGATCACGGCGTGGACTTCGTGCTGAAGA
ATTTCCAGCGCATGCAGGGCGGCGAGATTTTCGTGCCGAAGATTCCGTCGGTGAGAATCGTCGACCTGGCGCAGGCGATG
GCGCCCGAACTGGATCAGCACGTGATCGGCATTCGTCCCGGCGAGAAGCTGCACGAAATGATGATTGCGCGCGACGACAG
TCCGCACACGTTCGAATACGACGACCACTACGTGATCACACCCGCGATCCGCTTCGTCGTGCAAAGCGAGTACGAGACGA
ACGGGATGGGCGAGACGGGCAAGCGCGTGACGGAAGGCTTCAAGTACACGTCCGACAACAACGGCTGGTTCCTCAGCGTG
GACGAACTGGCCGCGCTCGACAAGCAACACCCATGA

Upstream 100 bases:

>100_bases
GCGGCGCACGGCGGCAGGCAGGCATAGCAGGTCAAAACAGGCAGCGGGAACGCACAGGGCGGCTTACGGGAAGTACGGCT
CCATATCAAGGAAGCGAACA

Downstream 100 bases:

>100_bases
CCGCGTTCATCCCTTACGGCCGGCAGTCGATCGACGAAGCGGATATTGCCGCCGTCGAAGCAGTCCTGCGTTCCGACTGG
CTCACGCAAGGCCCGGCGAT

Product: polysaccharide biosynthesis protein CapD

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 331; Mature: 331

Protein sequence:

>331_residues
MLDNKSILITGGTGSFGHKFISAVLAQYKPSRVVVFSRDELKQYEMQQKFDAPCMRYFLGDVRDAERLRQAMRGIDYVVH
AAALKQVPAAEYNPTECIRTNVTGAENVINAAIENGVEKVIALSTDKAASPINLYGATKLLSDKLFVAANNLVGKHRTRF
AVVRYGNVVGSRGSVVPFFRKLVADGSKSLPITDQRMTRFWITLDHGVDFVLKNFQRMQGGEIFVPKIPSVRIVDLAQAM
APELDQHVIGIRPGEKLHEMMIARDDSPHTFEYDDHYVITPAIRFVVQSEYETNGMGETGKRVTEGFKYTSDNNGWFLSV
DELAALDKQHP

Sequences:

>Translated_331_residues
MLDNKSILITGGTGSFGHKFISAVLAQYKPSRVVVFSRDELKQYEMQQKFDAPCMRYFLGDVRDAERLRQAMRGIDYVVH
AAALKQVPAAEYNPTECIRTNVTGAENVINAAIENGVEKVIALSTDKAASPINLYGATKLLSDKLFVAANNLVGKHRTRF
AVVRYGNVVGSRGSVVPFFRKLVADGSKSLPITDQRMTRFWITLDHGVDFVLKNFQRMQGGEIFVPKIPSVRIVDLAQAM
APELDQHVIGIRPGEKLHEMMIARDDSPHTFEYDDHYVITPAIRFVVQSEYETNGMGETGKRVTEGFKYTSDNNGWFLSV
DELAALDKQHP
>Mature_331_residues
MLDNKSILITGGTGSFGHKFISAVLAQYKPSRVVVFSRDELKQYEMQQKFDAPCMRYFLGDVRDAERLRQAMRGIDYVVH
AAALKQVPAAEYNPTECIRTNVTGAENVINAAIENGVEKVIALSTDKAASPINLYGATKLLSDKLFVAANNLVGKHRTRF
AVVRYGNVVGSRGSVVPFFRKLVADGSKSLPITDQRMTRFWITLDHGVDFVLKNFQRMQGGEIFVPKIPSVRIVDLAQAM
APELDQHVIGIRPGEKLHEMMIARDDSPHTFEYDDHYVITPAIRFVVQSEYETNGMGETGKRVTEGFKYTSDNNGWFLSV
DELAALDKQHP

Specific function: Unknown

COG id: COG1086

COG function: function code MG; Predicted nucleoside-diphosphate sugar epimerases

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the polysaccharide synthase family [H]

Homologues:

Organism=Homo sapiens, GI193211614, Length=164, Percent_Identity=28.6585365853659, Blast_Score=70, Evalue=2e-12,
Organism=Homo sapiens, GI8393516, Length=164, Percent_Identity=28.6585365853659, Blast_Score=70, Evalue=2e-12,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR016040
- InterPro:   IPR003869 [H]

Pfam domain/function: PF02719 Polysacc_synt_2 [H]

EC number: NA

Molecular weight: Translated: 37003; Mature: 37003

Theoretical pI: Translated: 8.22; Mature: 8.22

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
3.0 %Met     (Translated Protein)
3.6 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
3.0 %Met     (Mature Protein)
3.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLDNKSILITGGTGSFGHKFISAVLAQYKPSRVVVFSRDELKQYEMQQKFDAPCMRYFLG
CCCCCEEEEECCCCHHHHHHHHHHHHHCCCCEEEEECHHHHHHHHHHHHCCCHHHHHHHH
DVRDAERLRQAMRGIDYVVHAAALKQVPAAEYNPTECIRTNVTGAENVINAAIENGVEKV
CCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHEECCCCHHHHHHHHHHHHHHHE
IALSTDKAASPINLYGATKLLSDKLFVAANNLVGKHRTRFAVVRYGNVVGSRGSVVPFFR
EEECCCCCCCCEEHHHHHHHHHCCCEEEECCCCCCCCCEEEEEEECCEECCCCCHHHHHH
KLVADGSKSLPITDQRMTRFWITLDHGVDFVLKNFQRMQGGEIFVPKIPSVRIVDLAQAM
HHHHCCCCCCCCCCCCCEEEEEEECCCHHHHHHHHHHHCCCEEEECCCCCEEHHHHHHHH
APELDQHVIGIRPGEKLHEMMIARDDSPHTFEYDDHYVITPAIRFVVQSEYETNGMGETG
CCHHHCCEEECCCCHHHHHHHHHCCCCCCEEECCCCEEEHHHHHHHHHCCCCCCCCCCCH
KRVTEGFKYTSDNNGWFLSVDELAALDKQHP
HHHHHCCCEECCCCCEEEEHHHHHHHCCCCC
>Mature Secondary Structure
MLDNKSILITGGTGSFGHKFISAVLAQYKPSRVVVFSRDELKQYEMQQKFDAPCMRYFLG
CCCCCEEEEECCCCHHHHHHHHHHHHHCCCCEEEEECHHHHHHHHHHHHCCCHHHHHHHH
DVRDAERLRQAMRGIDYVVHAAALKQVPAAEYNPTECIRTNVTGAENVINAAIENGVEKV
CCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHEECCCCHHHHHHHHHHHHHHHE
IALSTDKAASPINLYGATKLLSDKLFVAANNLVGKHRTRFAVVRYGNVVGSRGSVVPFFR
EEECCCCCCCCEEHHHHHHHHHCCCEEEECCCCCCCCCEEEEEEECCEECCCCCHHHHHH
KLVADGSKSLPITDQRMTRFWITLDHGVDFVLKNFQRMQGGEIFVPKIPSVRIVDLAQAM
HHHHCCCCCCCCCCCCCEEEEEEECCCHHHHHHHHHHHCCCEEEECCCCCEEHHHHHHHH
APELDQHVIGIRPGEKLHEMMIARDDSPHTFEYDDHYVITPAIRFVVQSEYETNGMGETG
CCHHHCCEEECCCCHHHHHHHHHCCCCCCEEECCCCEEEHHHHHHHHHCCCCCCCCCCCH
KRVTEGFKYTSDNNGWFLSVDELAALDKQHP
HHHHHCCCEECCCCCEEEEHHHHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8688087 [H]