| Definition | Burkholderia phymatum STM815 chromosome chromosome 1, complete sequence. |
|---|---|
| Accession | NC_010622 |
| Length | 3,479,187 |
Click here to switch to the map view.
The map label for this gene is 186477752
Identifier: 186477752
GI number: 186477752
Start: 3372167
End: 3374212
Strand: Reverse
Name: 186477752
Synonym: Bphy_3006
Alternate gene names: NA
Gene position: 3374212-3372167 (Counterclockwise)
Preceding gene: 186477753
Following gene: 186477746
Centisome position: 96.98
GC content: 62.02
Gene sequence:
>2046_bases ATGAAACAGAAGGCCATTATCAGTCTGCTGTGGGGCAAGCATTTCGGCGCGCTCCAGCAGTTTCTGCAGATGCACGAACC GATGACGGTGATCGCGTCGCTGCCTTCGCTTTCGCCGCAGATGCAGGCCGCGATCGCGGAAACGGGTTGCACGCTCGTTT CGCTCGACGGTTTCGCGCAGGATGCGGGCGCGCAGCAGACGGTGAGCGAAGAGACGCAGCGCCTGTTGAGCACGTTCGAA CGCCACATTCAGCAGCAGCCGGAGTTGTGCGGCTTCACTGCCGAAGCTTCCGACAAGCTTCGTCCCATCGTGTTCGAAAG CGTGCGGGGCGATCTGCCCGCCACCGTGCAGTTGCTCGAGTGCCTGAAGCGCGCGGCCGAGCAATACGACATCGCCCTGC TGGCGACCAACGAGGACATGATGCGTGCCGGCAAGACGGCGACGGCATGGGCTCGCGCCAAAGGCATTCCGACCGTGCAT CTCGCCCATTCGATCGCGCTCATCGATCCATACACCGTGCACAATGAACTGATCGCCGACAAGCTCGTCGTGTACGGTCA GCGCGGCATGGAAGGCTATCGCGATCTGGGTGTCGCCGTGGACAGGCTGATCGCCGCGGGCAATCCGGCGTGGGATTGCT ATGCGACGCTGCGCAAGCAGAAGCCGGCGTGCCGTGCGCAACTCAACACGAAATACGGGCTCAAAGCGGAGTTGCCGCTC ATCGTGTTCGGCACGACATGGGCCGCGAATCTGAGCGCACACTGCATCGAAGACATTTACGACGCGTCGGTGCGCGCGTT CATGGGCGCATGCGAAAGCTTGAAGAAGGCGGGCGTGCGGTTCAATGCGGTAATCAAGGATCGCCCGTCGAATGCGGCGT TTGGCTCGACCCGTTGCGCAGAAATTCTGATGAAGCTGGGTGCGGCGGCCGACGGCTATTTCTACGCCAGCGACGACACT GAACTTTTCGCCGCGGGCGCCGACGTACTGGTCGCCGTCGATTCGAACTATCTGGTCGAAGGCATGCTCGCGCACACGCC CGTCGTCAATCTGATGAACACGGCGGGTATGCTGATGGGCCCGTGTTTCGAAGCGGAAACGGGCGTGGTGGAAGTCGAGG CGCATGAGCTCGCGTCGGCGCTCCACCAGATCCTGACGGATCACGCGTTGCGCGCCGGTCTGGTGCAACTGGGTCAGAAA CGCGCCGCGCACTATAACCATAACGACGGCGACGGCATGGCGTCGGTGCGCGTCGCGCAGGCACTCGCCAGCGCCGCCGC GGGACTTGCGCCGCGCGGCCAGCGCTACGTATGGCAGCAGTATCTGGACGTCGAGTCGGGCGAGATCGCCGAGGGCTATC ACACGCCGGGCCGGCCGAATCTGGTCGCGATGTATTCGAACAATCCTTCCACCGTGATCGATATCGGCTGCGCGGCGGGC AGCACGGCCGCGCTGATCAAGCAGCGTTTTCCGTCGAGCCGGGTGTGGGGCATCGAGATGAACCGCGCTGCCGCACAAGT GGCGAGCAGCAAGATCGACCGGGTGCTGGTCGGCAAGTTCGAAGATTTCGACCTCGAGCGCGAAGGCATCGCGAAGGGCA CGCTCGACGGCGTACTGCTCGCCGATGTGCTCGAACACATGTACAACCCGTGGGACGTGATGGTGAAACTACGGCCGTAC ATGTCGCCGACGGGCCAGCTCGTTTTGAGCATTCCCAACGTGCGCAACCTGATGTTGATGGACGATCTGAGCAAGGGCAA ATGGACCTATGCTGCCGCTGGCCTGCTCGACATCACGCATATCCGCTTCTTTACGCTGAGCGAGATCGTGAAGTTCTGCA ACGAGACCGGTTACAGGATCGTGCGCGCCGAGCACGCGATCGACGGCAGGCTGCGCGAGTTCTGGAATCAGAACCAGTCG AATACGACGCCGACCGAGATCAACATGGACAGGATAAAGCTCAAGGACGTCACGCGCGACGAACTGCTCGAGCTGTGTAC CATCCAGTTTCATCTGCTGCTCGAGAAAGATCCGCTGCACGGCTGA
Upstream 100 bases:
>100_bases ACAAATACAAGGAAGGCACCGACGTGACCGTCGGAGCGGAGTACAACCTGGTGCGGGTGCTGCTGTCCCGATACTTCGGC ATTTTCAGTGAGGGCCAGCG
Downstream 100 bases:
>100_bases CGGGTGCCGTCGCGATGCAAAGAAAAAACCCGGTGACGAGTCGATCGTCACCGGGTTTTGTCATGTCTGCTGTTGCATCG GTCCACTGAGCGGCGGACGC
Product: type 12 methyltransferase
Products: NA
Alternate protein names: Glycosyl Transferase Family Protein; O-Antigen Biosynthesis Protein; SAM-Dependent O-Methyltransferase; Glycosyltransferase; Methionine Biosynthesis Protein MetW; Methyltransferase; SAM-Dependent Methyltransferase; Bifunctional SAM-Dependent Methyltransferase Type; Methyltransferase Family Protein; Glycosyl Transferase; Methylase
Number of amino acids: Translated: 681; Mature: 681
Protein sequence:
>681_residues MKQKAIISLLWGKHFGALQQFLQMHEPMTVIASLPSLSPQMQAAIAETGCTLVSLDGFAQDAGAQQTVSEETQRLLSTFE RHIQQQPELCGFTAEASDKLRPIVFESVRGDLPATVQLLECLKRAAEQYDIALLATNEDMMRAGKTATAWARAKGIPTVH LAHSIALIDPYTVHNELIADKLVVYGQRGMEGYRDLGVAVDRLIAAGNPAWDCYATLRKQKPACRAQLNTKYGLKAELPL IVFGTTWAANLSAHCIEDIYDASVRAFMGACESLKKAGVRFNAVIKDRPSNAAFGSTRCAEILMKLGAAADGYFYASDDT ELFAAGADVLVAVDSNYLVEGMLAHTPVVNLMNTAGMLMGPCFEAETGVVEVEAHELASALHQILTDHALRAGLVQLGQK RAAHYNHNDGDGMASVRVAQALASAAAGLAPRGQRYVWQQYLDVESGEIAEGYHTPGRPNLVAMYSNNPSTVIDIGCAAG STAALIKQRFPSSRVWGIEMNRAAAQVASSKIDRVLVGKFEDFDLEREGIAKGTLDGVLLADVLEHMYNPWDVMVKLRPY MSPTGQLVLSIPNVRNLMLMDDLSKGKWTYAAAGLLDITHIRFFTLSEIVKFCNETGYRIVRAEHAIDGRLREFWNQNQS NTTPTEINMDRIKLKDVTRDELLELCTIQFHLLLEKDPLHG
Sequences:
>Translated_681_residues MKQKAIISLLWGKHFGALQQFLQMHEPMTVIASLPSLSPQMQAAIAETGCTLVSLDGFAQDAGAQQTVSEETQRLLSTFE RHIQQQPELCGFTAEASDKLRPIVFESVRGDLPATVQLLECLKRAAEQYDIALLATNEDMMRAGKTATAWARAKGIPTVH LAHSIALIDPYTVHNELIADKLVVYGQRGMEGYRDLGVAVDRLIAAGNPAWDCYATLRKQKPACRAQLNTKYGLKAELPL IVFGTTWAANLSAHCIEDIYDASVRAFMGACESLKKAGVRFNAVIKDRPSNAAFGSTRCAEILMKLGAAADGYFYASDDT ELFAAGADVLVAVDSNYLVEGMLAHTPVVNLMNTAGMLMGPCFEAETGVVEVEAHELASALHQILTDHALRAGLVQLGQK RAAHYNHNDGDGMASVRVAQALASAAAGLAPRGQRYVWQQYLDVESGEIAEGYHTPGRPNLVAMYSNNPSTVIDIGCAAG STAALIKQRFPSSRVWGIEMNRAAAQVASSKIDRVLVGKFEDFDLEREGIAKGTLDGVLLADVLEHMYNPWDVMVKLRPY MSPTGQLVLSIPNVRNLMLMDDLSKGKWTYAAAGLLDITHIRFFTLSEIVKFCNETGYRIVRAEHAIDGRLREFWNQNQS NTTPTEINMDRIKLKDVTRDELLELCTIQFHLLLEKDPLHG >Mature_681_residues MKQKAIISLLWGKHFGALQQFLQMHEPMTVIASLPSLSPQMQAAIAETGCTLVSLDGFAQDAGAQQTVSEETQRLLSTFE RHIQQQPELCGFTAEASDKLRPIVFESVRGDLPATVQLLECLKRAAEQYDIALLATNEDMMRAGKTATAWARAKGIPTVH LAHSIALIDPYTVHNELIADKLVVYGQRGMEGYRDLGVAVDRLIAAGNPAWDCYATLRKQKPACRAQLNTKYGLKAELPL IVFGTTWAANLSAHCIEDIYDASVRAFMGACESLKKAGVRFNAVIKDRPSNAAFGSTRCAEILMKLGAAADGYFYASDDT ELFAAGADVLVAVDSNYLVEGMLAHTPVVNLMNTAGMLMGPCFEAETGVVEVEAHELASALHQILTDHALRAGLVQLGQK RAAHYNHNDGDGMASVRVAQALASAAAGLAPRGQRYVWQQYLDVESGEIAEGYHTPGRPNLVAMYSNNPSTVIDIGCAAG STAALIKQRFPSSRVWGIEMNRAAAQVASSKIDRVLVGKFEDFDLEREGIAKGTLDGVLLADVLEHMYNPWDVMVKLRPY MSPTGQLVLSIPNVRNLMLMDDLSKGKWTYAAAGLLDITHIRFFTLSEIVKFCNETGYRIVRAEHAIDGRLREFWNQNQS NTTPTEINMDRIKLKDVTRDELLELCTIQFHLLLEKDPLHG
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 74651; Mature: 74651
Theoretical pI: Translated: 6.12; Mature: 6.12
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.8 %Cys (Translated Protein) 3.2 %Met (Translated Protein) 5.0 %Cys+Met (Translated Protein) 1.8 %Cys (Mature Protein) 3.2 %Met (Mature Protein) 5.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKQKAIISLLWGKHFGALQQFLQMHEPMTVIASLPSLSPQMQAAIAETGCTLVSLDGFAQ CCCHHHHHHHHHHHHHHHHHHHHHCCCCEEEHHCCCCCHHHHHHHHHCCCEEEEECCCCC DAGAQQTVSEETQRLLSTFERHIQQQPELCGFTAEASDKLRPIVFESVRGDLPATVQLLE CCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCHHHHHHHCCCCHHHHHHHH CLKRAAEQYDIALLATNEDMMRAGKTATAWARAKGIPTVHLAHSIALIDPYTVHNELIAD HHHHHHHHCCEEEEECCHHHHHCCCCHHHHHHHCCCCEEEHHHEEEEECCHHHHHHHHHH KLVVYGQRGMEGYRDLGVAVDRLIAAGNPAWDCYATLRKQKPACRAQLNTKYGLKAELPL HHHHHCCCCCHHHHHHHHHHHHHHHCCCCCHHHHHHHHHCCCHHHHCCCCCCCCEECCCE IVFGTTWAANLSAHCIEDIYDASVRAFMGACESLKKAGVRFNAVIKDRPSNAAFGSTRCA EEEECCHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEEECCCCCCCCCCHHHH EILMKLGAAADGYFYASDDTELFAAGADVLVAVDSNYLVEGMLAHTPVVNLMNTAGMLMG HHHHHHCCCCCCEEEECCCCEEEECCCCEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHC PCFEAETGVVEVEAHELASALHQILTDHALRAGLVQLGQKRAAHYNHNDGDGMASVRVAQ CCCCCCCCEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHH ALASAAAGLAPRGQRYVWQQYLDVESGEIAEGYHTPGRPNLVAMYSNNPSTVIDIGCAAG HHHHHHHCCCCCCCHHHHHHHHCCCCCCCCCCCCCCCCCCEEEEECCCCCEEEEEECCCC STAALIKQRFPSSRVWGIEMNRAAAQVASSKIDRVLVGKFEDFDLEREGIAKGTLDGVLL CHHHHHHHHCCCCCEEEEEHHHHHHHHHHHHHCCCEECCCCCCCCCHHCCCCCCHHHHHH ADVLEHMYNPWDVMVKLRPYMSPTGQLVLSIPNVRNLMLMDDLSKGKWTYAAAGLLDITH HHHHHHHCCCEEEEEEEECCCCCCCCEEEECCCCCCEEEEECCCCCCEEEEHHHHHHHHH IRFFTLSEIVKFCNETGYRIVRAEHAIDGRLREFWNQNQSNTTPTEINMDRIKLKDVTRD HHHHHHHHHHHHHCCCCCEEEEEHHHHHHHHHHHHCCCCCCCCCCEECCCCEEECCCCHH ELLELCTIQFHLLLEKDPLHG HHHHHHHHHEEEEEECCCCCC >Mature Secondary Structure MKQKAIISLLWGKHFGALQQFLQMHEPMTVIASLPSLSPQMQAAIAETGCTLVSLDGFAQ CCCHHHHHHHHHHHHHHHHHHHHHCCCCEEEHHCCCCCHHHHHHHHHCCCEEEEECCCCC DAGAQQTVSEETQRLLSTFERHIQQQPELCGFTAEASDKLRPIVFESVRGDLPATVQLLE CCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCHHHHHHHCCCCHHHHHHHH CLKRAAEQYDIALLATNEDMMRAGKTATAWARAKGIPTVHLAHSIALIDPYTVHNELIAD HHHHHHHHCCEEEEECCHHHHHCCCCHHHHHHHCCCCEEEHHHEEEEECCHHHHHHHHHH KLVVYGQRGMEGYRDLGVAVDRLIAAGNPAWDCYATLRKQKPACRAQLNTKYGLKAELPL HHHHHCCCCCHHHHHHHHHHHHHHHCCCCCHHHHHHHHHCCCHHHHCCCCCCCCEECCCE IVFGTTWAANLSAHCIEDIYDASVRAFMGACESLKKAGVRFNAVIKDRPSNAAFGSTRCA EEEECCHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEEECCCCCCCCCCHHHH EILMKLGAAADGYFYASDDTELFAAGADVLVAVDSNYLVEGMLAHTPVVNLMNTAGMLMG HHHHHHCCCCCCEEEECCCCEEEECCCCEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHC PCFEAETGVVEVEAHELASALHQILTDHALRAGLVQLGQKRAAHYNHNDGDGMASVRVAQ CCCCCCCCEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHH ALASAAAGLAPRGQRYVWQQYLDVESGEIAEGYHTPGRPNLVAMYSNNPSTVIDIGCAAG HHHHHHHCCCCCCCHHHHHHHHCCCCCCCCCCCCCCCCCCEEEEECCCCCEEEEEECCCC STAALIKQRFPSSRVWGIEMNRAAAQVASSKIDRVLVGKFEDFDLEREGIAKGTLDGVLL CHHHHHHHHCCCCCEEEEEHHHHHHHHHHHHHCCCEECCCCCCCCCHHCCCCCCHHHHHH ADVLEHMYNPWDVMVKLRPYMSPTGQLVLSIPNVRNLMLMDDLSKGKWTYAAAGLLDITH HHHHHHHCCCEEEEEEEECCCCCCCCEEEECCCCCCEEEEECCCCCCEEEEHHHHHHHHH IRFFTLSEIVKFCNETGYRIVRAEHAIDGRLREFWNQNQSNTTPTEINMDRIKLKDVTRD HHHHHHHHHHHHHCCCCCEEEEEHHHHHHHHHHHHCCCCCCCCCCEECCCCEEECCCCHH ELLELCTIQFHLLLEKDPLHG HHHHHHHHHEEEEEECCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA