| Definition | Burkholderia phymatum STM815 chromosome chromosome 1, complete sequence. |
|---|---|
| Accession | NC_010622 |
| Length | 3,479,187 |
Click here to switch to the map view.
The map label for this gene is tag [H]
Identifier: 186477731
GI number: 186477731
Start: 3343206
End: 3343802
Strand: Direct
Name: tag [H]
Synonym: Bphy_2985
Alternate gene names: 186477731
Gene position: 3343206-3343802 (Clockwise)
Preceding gene: 186477728
Following gene: 186477732
Centisome position: 96.09
GC content: 59.8
Gene sequence:
>597_bases GTGGCTGAGCAGCGATGCAACTGGGCGACGAGCGAAGCGCTCGCACACTATCACGACACCGAGTGGGGTGTCCCTTCGCG CGACGACCGGCATCTGTTCGAGATGCTCGTGCTCGAAGGCGCGCAGGCAGGGCTGTCGTGGTCGACGATCCTGAACAAGC GCGCCGGCTATCGGCGTGCATTCTCGAATTTCGATATCGATAAGGTCGCCCGCTACTCCGCGCAAAAGATCGACGCGCTC GTGCTCGATGAGGGTATCGTGCGCCATCGCGGCAAGATTGAGTCGACGGTTCTCAATGCGAAAGCGGTCAGGCAGATTCA GGCGGAGCACGGTTCGCTAGCGGATTTCGTATGGTCATTCGTCGATAACGTGCCCATCCAGAATACGTGGACGAGCTACC AGCACGCGCCCGCATCGACGGAAGTGTCGGACATGCTCAGCAAGGCGCTCAAAGGTTATGGCTGCAAATTTGTGGGCACA ACGATCTGCTACGCCTTCATGCAGGCAGTCGGCATGGTCAACGACCACCAGACCGATTGCGCCTGCTATTCGCGCTGCGC GTCGCTCGGTGAGAAGCGGCGCAAGAAGACGAAGTGA
Upstream 100 bases:
>100_bases CGACAATTAGCCGATCGGCCAGGTTGCGGCTGCACCCCATTCCGCTAAGCTGGCGCGATCCGATCGACGGGCGATCGACC AACCATGCAGGAGCCTGAAA
Downstream 100 bases:
>100_bases TGCGTCGCGGGCCATATGCCGACCGCGATCCGCTGGTGCGCCGTTGCAACACGTGATGTCTCGGCGCGCCAGCTCGAAGG GGTGCGAGAGCTCGCCCGGG
Product: DNA-3-methyladenine glycosylase I
Products: NA
Alternate protein names: 3-methyladenine-DNA glycosylase I, constitutive; TAG I; DNA-3-methyladenine glycosidase I; DNA-3-methyladenine glycosylase I [H]
Number of amino acids: Translated: 198; Mature: 197
Protein sequence:
>198_residues MAEQRCNWATSEALAHYHDTEWGVPSRDDRHLFEMLVLEGAQAGLSWSTILNKRAGYRRAFSNFDIDKVARYSAQKIDAL VLDEGIVRHRGKIESTVLNAKAVRQIQAEHGSLADFVWSFVDNVPIQNTWTSYQHAPASTEVSDMLSKALKGYGCKFVGT TICYAFMQAVGMVNDHQTDCACYSRCASLGEKRRKKTK
Sequences:
>Translated_198_residues MAEQRCNWATSEALAHYHDTEWGVPSRDDRHLFEMLVLEGAQAGLSWSTILNKRAGYRRAFSNFDIDKVARYSAQKIDAL VLDEGIVRHRGKIESTVLNAKAVRQIQAEHGSLADFVWSFVDNVPIQNTWTSYQHAPASTEVSDMLSKALKGYGCKFVGT TICYAFMQAVGMVNDHQTDCACYSRCASLGEKRRKKTK >Mature_197_residues AEQRCNWATSEALAHYHDTEWGVPSRDDRHLFEMLVLEGAQAGLSWSTILNKRAGYRRAFSNFDIDKVARYSAQKIDALV LDEGIVRHRGKIESTVLNAKAVRQIQAEHGSLADFVWSFVDNVPIQNTWTSYQHAPASTEVSDMLSKALKGYGCKFVGTT ICYAFMQAVGMVNDHQTDCACYSRCASLGEKRRKKTK
Specific function: Hydrolysis of the deoxyribose N-glycosidic bond to excise 3-methyladenine from the damaged DNA polymer formed by alkylation lesions [H]
COG id: COG2818
COG function: function code L; 3-methyladenine DNA glycosylase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
Organism=Escherichia coli, GI1789971, Length=182, Percent_Identity=52.1978021978022, Blast_Score=199, Evalue=1e-52,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR005019 - InterPro: IPR011257 - InterPro: IPR004597 [H]
Pfam domain/function: PF03352 Adenine_glyco [H]
EC number: =3.2.2.20 [H]
Molecular weight: Translated: 22271; Mature: 22140
Theoretical pI: Translated: 8.37; Mature: 8.37
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
3.0 %Cys (Translated Protein) 2.5 %Met (Translated Protein) 5.6 %Cys+Met (Translated Protein) 3.0 %Cys (Mature Protein) 2.0 %Met (Mature Protein) 5.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAEQRCNWATSEALAHYHDTEWGVPSRDDRHLFEMLVLEGAQAGLSWSTILNKRAGYRRA CCCCCCCHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHH FSNFDIDKVARYSAQKIDALVLDEGIVRHRGKIESTVLNAKAVRQIQAEHGSLADFVWSF HCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHCCHHHHHHHHH VDNVPIQNTWTSYQHAPASTEVSDMLSKALKGYGCKFVGTTICYAFMQAVGMVNDHQTDC HHCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHCCCCCCHHH ACYSRCASLGEKRRKKTK HHHHHHHHHHHHHHHCCC >Mature Secondary Structure AEQRCNWATSEALAHYHDTEWGVPSRDDRHLFEMLVLEGAQAGLSWSTILNKRAGYRRA CCCCCCHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHH FSNFDIDKVARYSAQKIDALVLDEGIVRHRGKIESTVLNAKAVRQIQAEHGSLADFVWSF HCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHCCHHHHHHHHH VDNVPIQNTWTSYQHAPASTEVSDMLSKALKGYGCKFVGTTICYAFMQAVGMVNDHQTDC HHCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHCCCCCCHHH ACYSRCASLGEKRRKKTK HHHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 3536912; 3520491; 8041620; 9278503 [H]