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The map label for this gene is flhD [H]

Identifier: 186477725

GI number: 186477725

Start: 3337347

End: 3337667

Strand: Reverse

Name: flhD [H]

Synonym: Bphy_2979

Alternate gene names: 186477725

Gene position: 3337667-3337347 (Counterclockwise)

Preceding gene: 186477727

Following gene: 186477724

Centisome position: 95.93

GC content: 59.19

Gene sequence:

>321_bases
ATGAGCACCCAAAGTGACATGCTCAATGAAATTAGGGAAGTGAACCTGTCCTATTTGCTACTCGCGCAGCGCCTTCTGCG
TGAAGACAAGCCAATGGGCATGTTCCGCATGGGCATTTCGGAGCAGCTTGCCGACGTGCTCTCCAACCTGTCGCTCGCGC
AGACAGTCAAGCTGGCCGCATCGAACCAGGTGCTGTGCCGCTTCCGTTTCGACGATCATCAGATCCTCTCGTCGCTGGCC
GACAAGGGCAAACCGACAGCCGTCGCGCAGGCGCACTCGGCCATTCTGATGGCGGGCCAGCCTGTCGAGCAGATCGGCTG
A

Upstream 100 bases:

>100_bases
GCACGCTGACCATAAGCGTGCCGTTCGTGGTTTTTTTAAACGCGATCGAGCAAACGTTTTACGACGGCCTGACCAGCCAG
ATTCAAATCGGGGGAATTCA

Downstream 100 bases:

>100_bases
TACCTGCCGAAGGCCGACGACGGGCGCTTCCGCGCCCGGACCAAGCCACCCTACGCGCGCCGGCGACGGCGCTTTTACCG
TTTCTCGCCCGCGCGGCGCG

Product: transcriptional activator FlhD

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 106; Mature: 105

Protein sequence:

>106_residues
MSTQSDMLNEIREVNLSYLLLAQRLLREDKPMGMFRMGISEQLADVLSNLSLAQTVKLAASNQVLCRFRFDDHQILSSLA
DKGKPTAVAQAHSAILMAGQPVEQIG

Sequences:

>Translated_106_residues
MSTQSDMLNEIREVNLSYLLLAQRLLREDKPMGMFRMGISEQLADVLSNLSLAQTVKLAASNQVLCRFRFDDHQILSSLA
DKGKPTAVAQAHSAILMAGQPVEQIG
>Mature_105_residues
STQSDMLNEIREVNLSYLLLAQRLLREDKPMGMFRMGISEQLADVLSNLSLAQTVKLAASNQVLCRFRFDDHQILSSLAD
KGKPTAVAQAHSAILMAGQPVEQIG

Specific function: Transcriptional activator. Involved in the regulation of a number of genetic systems [H]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the FlhD family [H]

Homologues:

Organism=Escherichia coli, GI145693151, Length=102, Percent_Identity=43.1372549019608, Blast_Score=99, Evalue=7e-23,

Paralogues:

None

Copy number: 10-20 (rich media) [C]

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR007911
- ProDom:   PD015582 [H]

Pfam domain/function: PF05247 FlhD [H]

EC number: NA

Molecular weight: Translated: 11687; Mature: 11556

Theoretical pI: Translated: 6.51; Mature: 6.51

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
5.7 %Met     (Translated Protein)
6.6 %Cys+Met (Translated Protein)
1.0 %Cys     (Mature Protein)
4.8 %Met     (Mature Protein)
5.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSTQSDMLNEIREVNLSYLLLAQRLLREDKPMGMFRMGISEQLADVLSNLSLAQTVKLAA
CCCHHHHHHHHHHCCHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHCCHHHHHHHHHC
SNQVLCRFRFDDHQILSSLADKGKPTAVAQAHSAILMAGQPVEQIG
CCCEEEEEECCHHHHHHHHHHCCCCCHHHHHHHHHHCCCCCHHHCC
>Mature Secondary Structure 
STQSDMLNEIREVNLSYLLLAQRLLREDKPMGMFRMGISEQLADVLSNLSLAQTVKLAA
CCHHHHHHHHHHCCHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHCCHHHHHHHHHC
SNQVLCRFRFDDHQILSSLADKGKPTAVAQAHSAILMAGQPVEQIG
CCCEEEEEECCHHHHHHHHHHCCCCCHHHHHHHHHHCCCCCHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA