| Definition | Burkholderia phymatum STM815 chromosome chromosome 1, complete sequence. |
|---|---|
| Accession | NC_010622 |
| Length | 3,479,187 |
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The map label for this gene is 186477711
Identifier: 186477711
GI number: 186477711
Start: 3322692
End: 3323960
Strand: Reverse
Name: 186477711
Synonym: Bphy_2965
Alternate gene names: NA
Gene position: 3323960-3322692 (Counterclockwise)
Preceding gene: 186477712
Following gene: 186477710
Centisome position: 95.54
GC content: 64.54
Gene sequence:
>1269_bases ATGCAATTTGCGTTCAAGCTCGGAGCAGGTGTCCGTGTCGTGAAGGCCGTTCTCGCCGTGTCCCTGGTCGCGGTGACGGC ATTCGTCGCGGGCTGCGGCGGAGGCGGGGACTCGTCTTCTTCATCGTCGAACAACAGCAACAGCGGCCCCAACCAGCAGC CGATCGCCGCGAATGCGGCGAACACGGTAGCCGTGACCGTGGGCCGCGGCGTAAAGGGCATCATCAACATACCGACCGTC AGCGTGACCGTCTGCGCGCCGAACTCATCGAACTGCACGACCATAGACAACGTGCTGCTCGATACCGGCTCGTACGGCCT GCGCATCGTCAACAGCAGCGCGGTGGCGGCGCTCGGGCTTACCCCTCTGACGGCGACAGCAGGCGGCCAGCTGGCCGAAT GTACGCACTTTGCCGACGGCTTCACATGGGGCACGGTTCGCACCGCGACCGTGAAGGTCAGCGGCGAAACGGCGAACAAC ATTCCGATCCAGGTGATCGGCGACATGGCCGACTCGACCGTTCCTTCGACCGGCTGCATCAACGGCTCGAACGAAAGTAC GGCCGATGCGCTCGGCGCGAACGGTATTCTCGGGATCGGCGTCGCACCCGTGGATTGCGGCTCGGCGTGCTCCGACCCGG CGAATGTCGCGCAGTTCAGCAACTACTACGCGTGCCCGAACGGGACCAACTGCACGCGCACGCAGGCAGAAACGCCCAAG CAGGTGGCCAACCCGGTCCCGAAGTTCGCCACCGACAACAACGGCGTGATCGTGCAGATGGCGCCGATTTCGGCGAACGG CGCGGCGTCGGCGACAGGAACGGTCGTGTTCGGCATCGGCACGCAGTCGAACAACGCCAATGCGGCAGGCACGACCTACA CAACCGACGCGTCCGGCGATTTCCCCGCCCGCGGCCAGTCGGACACGGTGTTTCTCGATTCGGGGTCGAACGGCTACTTC TTCCAGGACAGCTCGATTCCGGTGTGCGGCGGCAATCTGTCGGACTTCTATTGCCCGACCTCGACGGTGCAACGCACGGT GAATCTGCTCGGCGCAAACGGCGCGAAGGGGACGGCGACTATCAACATCGCGAACGCGCAGACGCTGCTCAGCAACGCGA GCAACTATGCGTTCAACGACCTCGGCGGCCAGGTCAGCTCGCTGACGGGGACGGATCTCGGCTTGCCGTTCTTCTACGGC CGTTACGTCTACTACGGGATGGACAGGAGCGCATTGCCGGGCGGCTCAGGGCCGTTCGTCGCGTTCTGA
Upstream 100 bases:
>100_bases GGCGGCCATATGGGCGCATTCTCCGGCCAAGCTTATCTGCCGCAGGCCCTGCCTTCGGGCGTGAGCGCCACCGACATCAA GTGACGACGGGAGACCCAAC
Downstream 100 bases:
>100_bases CCGGCAACGCGGCCATTCGAGGCGGCCCGCTGTAGCGCGGGCCGCCATCTCAGTCGGCGGTCCGCCTGCGGGTCGGGCCG CGCGCAGTGCCCGCCCATCG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 422; Mature: 422
Protein sequence:
>422_residues MQFAFKLGAGVRVVKAVLAVSLVAVTAFVAGCGGGGDSSSSSSNNSNSGPNQQPIAANAANTVAVTVGRGVKGIINIPTV SVTVCAPNSSNCTTIDNVLLDTGSYGLRIVNSSAVAALGLTPLTATAGGQLAECTHFADGFTWGTVRTATVKVSGETANN IPIQVIGDMADSTVPSTGCINGSNESTADALGANGILGIGVAPVDCGSACSDPANVAQFSNYYACPNGTNCTRTQAETPK QVANPVPKFATDNNGVIVQMAPISANGAASATGTVVFGIGTQSNNANAAGTTYTTDASGDFPARGQSDTVFLDSGSNGYF FQDSSIPVCGGNLSDFYCPTSTVQRTVNLLGANGAKGTATINIANAQTLLSNASNYAFNDLGGQVSSLTGTDLGLPFFYG RYVYYGMDRSALPGGSGPFVAF
Sequences:
>Translated_422_residues MQFAFKLGAGVRVVKAVLAVSLVAVTAFVAGCGGGGDSSSSSSNNSNSGPNQQPIAANAANTVAVTVGRGVKGIINIPTV SVTVCAPNSSNCTTIDNVLLDTGSYGLRIVNSSAVAALGLTPLTATAGGQLAECTHFADGFTWGTVRTATVKVSGETANN IPIQVIGDMADSTVPSTGCINGSNESTADALGANGILGIGVAPVDCGSACSDPANVAQFSNYYACPNGTNCTRTQAETPK QVANPVPKFATDNNGVIVQMAPISANGAASATGTVVFGIGTQSNNANAAGTTYTTDASGDFPARGQSDTVFLDSGSNGYF FQDSSIPVCGGNLSDFYCPTSTVQRTVNLLGANGAKGTATINIANAQTLLSNASNYAFNDLGGQVSSLTGTDLGLPFFYG RYVYYGMDRSALPGGSGPFVAF >Mature_422_residues MQFAFKLGAGVRVVKAVLAVSLVAVTAFVAGCGGGGDSSSSSSNNSNSGPNQQPIAANAANTVAVTVGRGVKGIINIPTV SVTVCAPNSSNCTTIDNVLLDTGSYGLRIVNSSAVAALGLTPLTATAGGQLAECTHFADGFTWGTVRTATVKVSGETANN IPIQVIGDMADSTVPSTGCINGSNESTADALGANGILGIGVAPVDCGSACSDPANVAQFSNYYACPNGTNCTRTQAETPK QVANPVPKFATDNNGVIVQMAPISANGAASATGTVVFGIGTQSNNANAAGTTYTTDASGDFPARGQSDTVFLDSGSNGYF FQDSSIPVCGGNLSDFYCPTSTVQRTVNLLGANGAKGTATINIANAQTLLSNASNYAFNDLGGQVSSLTGTDLGLPFFYG RYVYYGMDRSALPGGSGPFVAF
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 42291; Mature: 42291
Theoretical pI: Translated: 4.40; Mature: 4.40
Prosite motif: PS00013 PROKAR_LIPOPROTEIN
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.6 %Cys (Translated Protein) 0.9 %Met (Translated Protein) 3.6 %Cys+Met (Translated Protein) 2.6 %Cys (Mature Protein) 0.9 %Met (Mature Protein) 3.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MQFAFKLGAGVRVVKAVLAVSLVAVTAFVAGCGGGGDSSSSSSNNSNSGPNQQPIAANAA CCEEEECCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCEECCCC NTVAVTVGRGVKGIINIPTVSVTVCAPNSSNCTTIDNVLLDTGSYGLRIVNSSAVAALGL CEEEEEECCCCCEEEECCEEEEEEECCCCCCCEEHHHEEEECCCCCEEEECCCCEEEECC TPLTATAGGQLAECTHFADGFTWGTVRTATVKVSGETANNIPIQVIGDMADSTVPSTGCI CCEEECCCCCHHHHHHHCCCCEECEEEEEEEEEECCCCCCCCEEEEECCCCCCCCCCCCC NGSNESTADALGANGILGIGVAPVDCGSACSDPANVAQFSNYYACPNGTNCTRTQAETPK CCCCCCHHHHCCCCCEEEECCCCCCCCCCCCCCHHHHHHCCEEECCCCCCCCCCCCCCCH QVANPVPKFATDNNGVIVQMAPISANGAASATGTVVFGIGTQSNNANAAGTTYTTDASGD HHHCCCCCCCCCCCCEEEEECCCCCCCCCCCCCEEEEEECCCCCCCCCCCCEEECCCCCC FPARGQSDTVFLDSGSNGYFFQDSSIPVCGGNLSDFYCPTSTVQRTVNLLGANGAKGTAT CCCCCCCCEEEEECCCCCEEEECCCCCEECCCCCCCCCCHHHHHHHHHHHCCCCCCCEEE INIANAQTLLSNASNYAFNDLGGQVSSLTGTDLGLPFFYGRYVYYGMDRSALPGGSGPFV EEECCHHHHHHCCCCCEEHHCCCCEEECCCCCCCCHHHCCCEEEEECCCCCCCCCCCCCC AF CC >Mature Secondary Structure MQFAFKLGAGVRVVKAVLAVSLVAVTAFVAGCGGGGDSSSSSSNNSNSGPNQQPIAANAA CCEEEECCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCEECCCC NTVAVTVGRGVKGIINIPTVSVTVCAPNSSNCTTIDNVLLDTGSYGLRIVNSSAVAALGL CEEEEEECCCCCEEEECCEEEEEEECCCCCCCEEHHHEEEECCCCCEEEECCCCEEEECC TPLTATAGGQLAECTHFADGFTWGTVRTATVKVSGETANNIPIQVIGDMADSTVPSTGCI CCEEECCCCCHHHHHHHCCCCEECEEEEEEEEEECCCCCCCCEEEEECCCCCCCCCCCCC NGSNESTADALGANGILGIGVAPVDCGSACSDPANVAQFSNYYACPNGTNCTRTQAETPK CCCCCCHHHHCCCCCEEEECCCCCCCCCCCCCCHHHHHHCCEEECCCCCCCCCCCCCCCH QVANPVPKFATDNNGVIVQMAPISANGAASATGTVVFGIGTQSNNANAAGTTYTTDASGD HHHCCCCCCCCCCCCEEEEECCCCCCCCCCCCCEEEEEECCCCCCCCCCCCEEECCCCCC FPARGQSDTVFLDSGSNGYFFQDSSIPVCGGNLSDFYCPTSTVQRTVNLLGANGAKGTAT CCCCCCCCEEEEECCCCCEEEECCCCCEECCCCCCCCCCHHHHHHHHHHHCCCCCCCEEE INIANAQTLLSNASNYAFNDLGGQVSSLTGTDLGLPFFYGRYVYYGMDRSALPGGSGPFV EEECCHHHHHHCCCCCEEHHCCCCEEECCCCCCCCHHHCCCEEEEECCCCCCCCCCCCCC AF CC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA