| Definition | Burkholderia phymatum STM815 chromosome chromosome 1, complete sequence. |
|---|---|
| Accession | NC_010622 |
| Length | 3,479,187 |
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The map label for this gene is 186477712
Identifier: 186477712
GI number: 186477712
Start: 3323977
End: 3324543
Strand: Reverse
Name: 186477712
Synonym: Bphy_2966
Alternate gene names: NA
Gene position: 3324543-3323977 (Counterclockwise)
Preceding gene: 186477713
Following gene: 186477711
Centisome position: 95.56
GC content: 66.31
Gene sequence:
>567_bases ATGTCGATCCGCTCGAGCCGTGCTGTCGTTGCGTCAGCGCTCGGATTCTGCTGTTCTCTGTCCGTCCTGTTCATTCCGCT GCCCGCTAGCGCCGCGCTAGGCGGCAACCCGATGACGCCGCCCGCCGGGGCGAGCGCCACCACTCGCTCGGTCTCCCGTC CTACGTCGAATGGTGTCGCCACGATGCGCAGCGCATCGTCGTCGAGTTCGGGTGCGACGGCGTCGTCCAGTTCTTCTGCC ACGTCGGCTTCATACACCGTACGTGAAACGACACTGGGCAACGGCACGGTGATCCGCGAATACATCACGTCGGCGGGCAG CGTGTTCGGTCTTGCATGGAGCGGCCCGCAGATGCCCGATCTGTCCGACCTGCTTGGCAGCTACTTCCCGCAGTACGTCG CCGGCGTGACGAATGCGCGCCAGCTGCGCGGCGGCGGACACGGTCCGGGCGTCGTGCAGGACAACGGGCTCGTCGTGCAT TCGGGCGGCCATATGGGCGCATTCTCCGGCCAAGCTTATCTGCCGCAGGCCCTGCCTTCGGGCGTGAGCGCCACCGACAT CAAGTGA
Upstream 100 bases:
>100_bases GTGCACACAGCGCGCGCCGGGCCGTTTGCTCCTGAACCAATAAGCCGGGCCCGCATATTGCGGGTACTGTTCGCTGTCGA TTGGGGGAGGGTGCACAACC
Downstream 100 bases:
>100_bases CGACGGGAGACCCAACATGCAATTTGCGTTCAAGCTCGGAGCAGGTGTCCGTGTCGTGAAGGCCGTTCTCGCCGTGTCCC TGGTCGCGGTGACGGCATTC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 188; Mature: 187
Protein sequence:
>188_residues MSIRSSRAVVASALGFCCSLSVLFIPLPASAALGGNPMTPPAGASATTRSVSRPTSNGVATMRSASSSSSGATASSSSSA TSASYTVRETTLGNGTVIREYITSAGSVFGLAWSGPQMPDLSDLLGSYFPQYVAGVTNARQLRGGGHGPGVVQDNGLVVH SGGHMGAFSGQAYLPQALPSGVSATDIK
Sequences:
>Translated_188_residues MSIRSSRAVVASALGFCCSLSVLFIPLPASAALGGNPMTPPAGASATTRSVSRPTSNGVATMRSASSSSSGATASSSSSA TSASYTVRETTLGNGTVIREYITSAGSVFGLAWSGPQMPDLSDLLGSYFPQYVAGVTNARQLRGGGHGPGVVQDNGLVVH SGGHMGAFSGQAYLPQALPSGVSATDIK >Mature_187_residues SIRSSRAVVASALGFCCSLSVLFIPLPASAALGGNPMTPPAGASATTRSVSRPTSNGVATMRSASSSSSGATASSSSSAT SASYTVRETTLGNGTVIREYITSAGSVFGLAWSGPQMPDLSDLLGSYFPQYVAGVTNARQLRGGGHGPGVVQDNGLVVHS GGHMGAFSGQAYLPQALPSGVSATDIK
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 18717; Mature: 18586
Theoretical pI: Translated: 9.59; Mature: 9.59
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.1 %Cys (Translated Protein) 2.7 %Met (Translated Protein) 3.7 %Cys+Met (Translated Protein) 1.1 %Cys (Mature Protein) 2.1 %Met (Mature Protein) 3.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSIRSSRAVVASALGFCCSLSVLFIPLPASAALGGNPMTPPAGASATTRSVSRPTSNGVA CCCCCHHHHHHHHHHHHHHCEEEEEECCCCCCCCCCCCCCCCCCCCCHHCCCCCCCCCCE TMRSASSSSSGATASSSSSATSASYTVRETTLGNGTVIREYITSAGSVFGLAWSGPQMPD EHHCCCCCCCCCCCCCCCCCCCCEEEEEEEECCCCHHHHHHHHCCCCEEEEEECCCCCCC LSDLLGSYFPQYVAGVTNARQLRGGGHGPGVVQDNGLVVHSGGHMGAFSGQAYLPQALPS HHHHHHHHHHHHHHHCCCHHHHCCCCCCCCEEECCCEEEECCCCCCCCCCCCCCHHHCCC GVSATDIK CCCCCCCC >Mature Secondary Structure SIRSSRAVVASALGFCCSLSVLFIPLPASAALGGNPMTPPAGASATTRSVSRPTSNGVA CCCCHHHHHHHHHHHHHHCEEEEEECCCCCCCCCCCCCCCCCCCCCHHCCCCCCCCCCE TMRSASSSSSGATASSSSSATSASYTVRETTLGNGTVIREYITSAGSVFGLAWSGPQMPD EHHCCCCCCCCCCCCCCCCCCCCEEEEEEEECCCCHHHHHHHHCCCCEEEEEECCCCCCC LSDLLGSYFPQYVAGVTNARQLRGGGHGPGVVQDNGLVVHSGGHMGAFSGQAYLPQALPS HHHHHHHHHHHHHHHCCCHHHHCCCCCCCCEEECCCEEEECCCCCCCCCCCCCCHHHCCC GVSATDIK CCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA