| Definition | Burkholderia phymatum STM815 chromosome chromosome 1, complete sequence. |
|---|---|
| Accession | NC_010622 |
| Length | 3,479,187 |
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The map label for this gene is flhA [H]
Identifier: 186477709
GI number: 186477709
Start: 3319173
End: 3321275
Strand: Reverse
Name: flhA [H]
Synonym: Bphy_2963
Alternate gene names: 186477709
Gene position: 3321275-3319173 (Counterclockwise)
Preceding gene: 186477710
Following gene: 186477708
Centisome position: 95.46
GC content: 64.62
Gene sequence:
>2103_bases ATGAACGCCCGCGCGGGTTTCCTTTCACGACGGCCGGACGCGCTGAACGGCACCAATCTGCGGGCACTGGCGGGCCCGCT TCTGATCTGCATGATCCTCGGCATGATGATCCTGCCGTTGCCGCCATTCCTGCTGGATCTGCTGTTCACGTTCAACATCG CGCTGTCGGTGATGGTGCTGCTCGTCAGCATGTACACGATGAAGCCGCTCGACTTCGCGGCCTTCCCGAGCGTGCTGCTG TTCTCGACGCTGCTGCGGCTGTCGCTGAACGTCGCGTCGACCCGTATCGTGCTGCTCGAAGGCCATACGGGGCCGGGCGC GGCGGGCGCCGTGATCGAGGCGTTCGGCCACTTCCTCGTGGGCGGCAACTTCGCGGTCGGTATTGTCGTGTTCGTGATCC TGATGGTGATCAACTTCATGGTGATCACGAAAGGCGCGGGACGTATCGCGGAAGTGTCCGCGCGCTTCACGCTGGACGCG ATGCCTGGCAAGCAGATGTCGATCGACGCCGACCTCAACGCCGGCATGATCAACGAAGATCAGGCTCGCAAGCGCCGTAT GGAAGTCTCGCAGGAAGCCGAGTTCTACGGTTCGATGGACGGTGCGAGCAAGTTCGTGCGCGGCGACGCGATTGCCGGTT TGCTGATCATGGTGATCAATATCATCGGCGGCCTGATCGTCGGGGTCGTGCAGCACGGCATGGACTTCGCCGACGCCGGC AAGACCTACACGCTGCTGACGATCGGTGACGGCCTCGTCGCGCAGATTCCGTCGCTCGTGATTTCGACGGCAGCGGGTGT GATCGTGTCGCGCGTCGCCACCGATGAAGACATCGGCACGCAGCTGACGGGCCAGCTCTTCACGAACCCGCGCGTGCTGA TGATCACGGGCTCGATCCTCGTGCTGATGGGCCTGATTCCGGGCATGCCGCACTTCGCGTTCCTGCTGCTGGGCGGCGGC GCGATCCAGCTCGCGCGCACGATGAAAAAGCGCGCTGCGCAGAGCAAGACGTCGACGGCGCTCGCCGAAGTCGCACCGCA GGCGCTCGCGCCGTCGGAAGCTGCGGAGGCGAGCTGGGACGACGTGACGATGATCGACGCGCTCGGGCTCGAAGTCGGCT ATCGCCTGATTCCCCTCGTCGACAAGAACTCGGACGGCGAACTGCTCAAGCGTATCAAGAACATCCGCAAGAAGTTCGCG CAGGAAATCGGCTTCCTGCCGCCCGTCATTCATATCCGCGACAACCTCGAGCTGCGGCCGAACGGTTACCGGATCGCCCT CAAGGGCGTCGAAGTGGGCGTCGGCGAGGCATATCCGGGACAGTGGCTCGCGATCAACCCCGGCCAGGTCACAGCGGCGC TGCCGGGCACGCCGACCACGGACCCGGCGTTCGGGCTGCCCGCGATCTGGATCGACACGAATCTGCGCGAACAGGCGCAG GTGTACGGCTACACAGTGGTCGATTCGAGCACGGTCGTCGCGACTCACCTGAATCATCTCGTCGTCACGCACGCGGCGGA ACTGCTCGGCCGCCAGGAAGTGCAGGCGCTGATCGAGCGGATGCAGAAGGACGCCGCGCCGCTTGTCGACGACGTTGTGC CGAAGATGCTGCCCGTCGCCACGCTGCAGAAGGTGCTGCAGAACCTGCTCGACGAAGGCGTGCCGATCCGCGACATGCGC ACGATCCTCGAGGCGCTGTCGGAGCATGGCTCGAAGATCACCGATTCGCACGATCTGACGGCCGTCGTGCGCCTCGCGCT CGGCCGCGCTATCACACAGCAGTGGTTCCCCGGCAACGGCGACATTCAGGTGATGGGCCTCGATTCGAATCTGGAGCGGC TGCTCACTCAGGCGCTTGCGACGGGCTCGAATCCCGGTCTCGAACCGGGCCTCGCGAACACGCTGCTGATGGAGACGCAA AAGGCGATGACGCGCCAGCAGAACCTCGGGCTTACACCCGTCATGCTGGTCCAGCATTCGTTGCGCGCGATGCTCGCGCG CTTCCTGCGGCGCAGCCTGCCGCAGCTCAAGGTGCTGTCGTATGCGGAAGTGCCCGATACGCGGCATGTGCGTGTCGTCA ACGTGATCGGCGCGCACGGCTAG
Upstream 100 bases:
>100_bases TTCCGCCGGAGCTGGACAAGGGCGGCGTGTCGGACGACGACGCCGGCCAGGAAGCTGCCGAGGCACTGGGCGGCGACAAT CAAAGTAATGGAGTATCGGC
Downstream 100 bases:
>100_bases GCGGCCACGCACTGCGCTTTCACGACCTCTCCCAGGCCGTTCGTTCGACTGCGCTTCTTTTCTCGAAGGCCGGTCCGCAT TTCGCGGCCGGCCTTCTTCA
Product: flagellar biosynthesis protein FlhA
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 700; Mature: 700
Protein sequence:
>700_residues MNARAGFLSRRPDALNGTNLRALAGPLLICMILGMMILPLPPFLLDLLFTFNIALSVMVLLVSMYTMKPLDFAAFPSVLL FSTLLRLSLNVASTRIVLLEGHTGPGAAGAVIEAFGHFLVGGNFAVGIVVFVILMVINFMVITKGAGRIAEVSARFTLDA MPGKQMSIDADLNAGMINEDQARKRRMEVSQEAEFYGSMDGASKFVRGDAIAGLLIMVINIIGGLIVGVVQHGMDFADAG KTYTLLTIGDGLVAQIPSLVISTAAGVIVSRVATDEDIGTQLTGQLFTNPRVLMITGSILVLMGLIPGMPHFAFLLLGGG AIQLARTMKKRAAQSKTSTALAEVAPQALAPSEAAEASWDDVTMIDALGLEVGYRLIPLVDKNSDGELLKRIKNIRKKFA QEIGFLPPVIHIRDNLELRPNGYRIALKGVEVGVGEAYPGQWLAINPGQVTAALPGTPTTDPAFGLPAIWIDTNLREQAQ VYGYTVVDSSTVVATHLNHLVVTHAAELLGRQEVQALIERMQKDAAPLVDDVVPKMLPVATLQKVLQNLLDEGVPIRDMR TILEALSEHGSKITDSHDLTAVVRLALGRAITQQWFPGNGDIQVMGLDSNLERLLTQALATGSNPGLEPGLANTLLMETQ KAMTRQQNLGLTPVMLVQHSLRAMLARFLRRSLPQLKVLSYAEVPDTRHVRVVNVIGAHG
Sequences:
>Translated_700_residues MNARAGFLSRRPDALNGTNLRALAGPLLICMILGMMILPLPPFLLDLLFTFNIALSVMVLLVSMYTMKPLDFAAFPSVLL FSTLLRLSLNVASTRIVLLEGHTGPGAAGAVIEAFGHFLVGGNFAVGIVVFVILMVINFMVITKGAGRIAEVSARFTLDA MPGKQMSIDADLNAGMINEDQARKRRMEVSQEAEFYGSMDGASKFVRGDAIAGLLIMVINIIGGLIVGVVQHGMDFADAG KTYTLLTIGDGLVAQIPSLVISTAAGVIVSRVATDEDIGTQLTGQLFTNPRVLMITGSILVLMGLIPGMPHFAFLLLGGG AIQLARTMKKRAAQSKTSTALAEVAPQALAPSEAAEASWDDVTMIDALGLEVGYRLIPLVDKNSDGELLKRIKNIRKKFA QEIGFLPPVIHIRDNLELRPNGYRIALKGVEVGVGEAYPGQWLAINPGQVTAALPGTPTTDPAFGLPAIWIDTNLREQAQ VYGYTVVDSSTVVATHLNHLVVTHAAELLGRQEVQALIERMQKDAAPLVDDVVPKMLPVATLQKVLQNLLDEGVPIRDMR TILEALSEHGSKITDSHDLTAVVRLALGRAITQQWFPGNGDIQVMGLDSNLERLLTQALATGSNPGLEPGLANTLLMETQ KAMTRQQNLGLTPVMLVQHSLRAMLARFLRRSLPQLKVLSYAEVPDTRHVRVVNVIGAHG >Mature_700_residues MNARAGFLSRRPDALNGTNLRALAGPLLICMILGMMILPLPPFLLDLLFTFNIALSVMVLLVSMYTMKPLDFAAFPSVLL FSTLLRLSLNVASTRIVLLEGHTGPGAAGAVIEAFGHFLVGGNFAVGIVVFVILMVINFMVITKGAGRIAEVSARFTLDA MPGKQMSIDADLNAGMINEDQARKRRMEVSQEAEFYGSMDGASKFVRGDAIAGLLIMVINIIGGLIVGVVQHGMDFADAG KTYTLLTIGDGLVAQIPSLVISTAAGVIVSRVATDEDIGTQLTGQLFTNPRVLMITGSILVLMGLIPGMPHFAFLLLGGG AIQLARTMKKRAAQSKTSTALAEVAPQALAPSEAAEASWDDVTMIDALGLEVGYRLIPLVDKNSDGELLKRIKNIRKKFA QEIGFLPPVIHIRDNLELRPNGYRIALKGVEVGVGEAYPGQWLAINPGQVTAALPGTPTTDPAFGLPAIWIDTNLREQAQ VYGYTVVDSSTVVATHLNHLVVTHAAELLGRQEVQALIERMQKDAAPLVDDVVPKMLPVATLQKVLQNLLDEGVPIRDMR TILEALSEHGSKITDSHDLTAVVRLALGRAITQQWFPGNGDIQVMGLDSNLERLLTQALATGSNPGLEPGLANTLLMETQ KAMTRQQNLGLTPVMLVQHSLRAMLARFLRRSLPQLKVLSYAEVPDTRHVRVVNVIGAHG
Specific function: Required for formation of the rod structure of the flagellar apparatus. Together with fliI and fliH, may constitute the export apparatus of flagellin [H]
COG id: COG1298
COG function: function code NU; Flagellar biosynthesis pathway, component FlhA
Gene ontology:
Cell location: Cell inner membrane; Multi-pass membrane protein [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the FHIPEP (flagella/HR/invasion proteins export pore) family [H]
Homologues:
Organism=Escherichia coli, GI1788187, Length=689, Percent_Identity=65.8925979680697, Blast_Score=907, Evalue=0.0,
Paralogues:
None
Copy number: 10-20 (rich media) [C]
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR006301 - InterPro: IPR001712 [H]
Pfam domain/function: PF00771 FHIPEP [H]
EC number: NA
Molecular weight: Translated: 75193; Mature: 75193
Theoretical pI: Translated: 7.02; Mature: 7.02
Prosite motif: PS00994 FHIPEP
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.1 %Cys (Translated Protein) 4.1 %Met (Translated Protein) 4.3 %Cys+Met (Translated Protein) 0.1 %Cys (Mature Protein) 4.1 %Met (Mature Protein) 4.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNARAGFLSRRPDALNGTNLRALAGPLLICMILGMMILPLPPFLLDLLFTFNIALSVMVL CCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHH LVSMYTMKPLDFAAFPSVLLFSTLLRLSLNVASTRIVLLEGHTGPGAAGAVIEAFGHFLV HHHHHHCCCCCHHHHHHHHHHHHHHHHHHCCCCEEEEEEECCCCCCHHHHHHHHHHHHHC GGNFAVGIVVFVILMVINFMVITKGAGRIAEVSARFTLDAMPGKQMSIDADLNAGMINED CCCHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHEEEEEECCCCCCEEECCCCCCCCCCHH QARKRRMEVSQEAEFYGSMDGASKFVRGDAIAGLLIMVINIIGGLIVGVVQHGMDFADAG HHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHCC KTYTLLTIGDGLVAQIPSLVISTAAGVIVSRVATDEDIGTQLTGQLFTNPRVLMITGSIL CEEEEEEECCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHCCCEEEEEECHHH VLMGLIPGMPHFAFLLLGGGAIQLARTMKKRAAQSKTSTALAEVAPQALAPSEAAEASWD HHHHHHCCCHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHCCCCC DVTMIDALGLEVGYRLIPLVDKNSDGELLKRIKNIRKKFAQEIGFLPPVIHIRDNLELRP CCHHHHHHHHHHCCEEEEEEECCCCHHHHHHHHHHHHHHHHHHCCCCCEEEECCCCEECC NGYRIALKGVEVGVGEAYPGQWLAINPGQVTAALPGTPTTDPAFGLPAIWIDTNLREQAQ CCEEEEEEEEEECCCCCCCCCEEEECCCCEEEECCCCCCCCCCCCCCEEEEECCCHHHHH VYGYTVVDSSTVVATHLNHLVVTHAAELLGRQEVQALIERMQKDAAPLVDDVVPKMLPVA HEEEEEECCCEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHH TLQKVLQNLLDEGVPIRDMRTILEALSEHGSKITDSHDLTAVVRLALGRAITQQWFPGNG HHHHHHHHHHHCCCCHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCC DIQVMGLDSNLERLLTQALATGSNPGLEPGLANTLLMETQKAMTRQQNLGLTPVMLVQHS CEEEEECCHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCHHHHHHHH LRAMLARFLRRSLPQLKVLSYAEVPDTRHVRVVNVIGAHG HHHHHHHHHHHCCCHHHHHHHHCCCCCCCEEEEEECCCCC >Mature Secondary Structure MNARAGFLSRRPDALNGTNLRALAGPLLICMILGMMILPLPPFLLDLLFTFNIALSVMVL CCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHH LVSMYTMKPLDFAAFPSVLLFSTLLRLSLNVASTRIVLLEGHTGPGAAGAVIEAFGHFLV HHHHHHCCCCCHHHHHHHHHHHHHHHHHHCCCCEEEEEEECCCCCCHHHHHHHHHHHHHC GGNFAVGIVVFVILMVINFMVITKGAGRIAEVSARFTLDAMPGKQMSIDADLNAGMINED CCCHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHEEEEEECCCCCCEEECCCCCCCCCCHH QARKRRMEVSQEAEFYGSMDGASKFVRGDAIAGLLIMVINIIGGLIVGVVQHGMDFADAG HHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHCC KTYTLLTIGDGLVAQIPSLVISTAAGVIVSRVATDEDIGTQLTGQLFTNPRVLMITGSIL CEEEEEEECCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHCCCEEEEEECHHH VLMGLIPGMPHFAFLLLGGGAIQLARTMKKRAAQSKTSTALAEVAPQALAPSEAAEASWD HHHHHHCCCHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHCCCCC DVTMIDALGLEVGYRLIPLVDKNSDGELLKRIKNIRKKFAQEIGFLPPVIHIRDNLELRP CCHHHHHHHHHHCCEEEEEEECCCCHHHHHHHHHHHHHHHHHHCCCCCEEEECCCCEECC NGYRIALKGVEVGVGEAYPGQWLAINPGQVTAALPGTPTTDPAFGLPAIWIDTNLREQAQ CCEEEEEEEEEECCCCCCCCCEEEECCCCEEEECCCCCCCCCCCCCCEEEEECCCHHHHH VYGYTVVDSSTVVATHLNHLVVTHAAELLGRQEVQALIERMQKDAAPLVDDVVPKMLPVA HEEEEEECCCEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHH TLQKVLQNLLDEGVPIRDMRTILEALSEHGSKITDSHDLTAVVRLALGRAITQQWFPGNG HHHHHHHHHHHCCCCHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCC DIQVMGLDSNLERLLTQALATGSNPGLEPGLANTLLMETQKAMTRQQNLGLTPVMLVQHS CEEEEECCHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCHHHHHHHH LRAMLARFLRRSLPQLKVLSYAEVPDTRHVRVVNVIGAHG HHHHHHHHHHHCCCHHHHHHHHCCCCCCCEEEEEECCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 9097040; 9278503 [H]