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The map label for this gene is flhF [H]

Identifier: 186477708

GI number: 186477708

Start: 3316945

End: 3318879

Strand: Reverse

Name: flhF [H]

Synonym: Bphy_2962

Alternate gene names: 186477708

Gene position: 3318879-3316945 (Counterclockwise)

Preceding gene: 186477709

Following gene: 186477707

Centisome position: 95.39

GC content: 67.03

Gene sequence:

>1935_bases
ATGTCGCCGGTCCGCGCAGCTCATCGGAGAATCAGCTTGAACATTCGCAAATTTGTCGGTGCAACGAGTCGTGACGCGCT
GCGTCTCGTCCGTGAGGCATTGGGCTCCGATGCAGTCGTGCTGTCGAATCGCACCAACGAAGATGGCACGGTCGAAATCG
TCGCCGTTGCCGACCGCGACCTGAGCGCAATCGCGCCGCGCGGCCAGGAAGGCGCAGCATCCGGCAGCCCGAACGCAGGC
GCGAACGCTGCAGCTGGCGGTGCGCGCGCGCCGGTAGCGCCGACCGCATCGCCGACGCAGCCGTCCGCGCTGTCGATGCC
CGTCAATCCGTACGCGAGCGGTATGCCCGACGTGTTCTCGTCGGTGTTCGGCGCCAGCCCTGAAGCGGGCACCGAGCGCA
TGCCCGCCGCGAGCGAAGAGAAGCCTGAGCCGCAAACGGCCACGGCCGCGGACGCAGCAGCCGACTCGCCCGCTGTGAAC
GCGGCGCGCGCAACCGACGACGTTCGCGTCGAACTGCGCGCGGAAGCACGCAGCGAAGTTCCCGCAGCGCCCGCAGCCGC
CGTCAAGCCGACAGCGACCGCGATGCCTGAAGCACCCGTTCGCCAGCGCACGATGGCCGAAACGAATCCTTGGCTGATCG
ATCACGCGCGCCGCATTGCGGCCAAGGACGTGGTGCCCGCAGCCAATCCGACGATGACGCCCGCCGCCGCTGTCGCGCGC
GGGCTGGGTACGCCCGTCGATGCAGTGAACGAAGAAGCGAAGCCCGACTGGGCGCGCGAAGCGGCGCAACTCGCCGCCCG
GCGCGCCGCGCACAAGGGCCACGTCACGCCGACGGTGGCGGAAGGCGCGAGCGACATCAACACGGCACGCGACGCGCGCA
AGGGCGCAGCCGGCGACATCACGCCGAAGGTCGCCGCCGCGCTCACGGAGTCGATCCAGTCGCGCATCGAGCAGATGGTC
AACGAGACCGTGATGCACGAGCTGGGCGCGATGCGCGGCATGATGGAAGAGCAGTTCGCAGGCCTGCTGTGGGCCGACCG
CCAGCGCCGCAGCCCGACGCATGCTGCGCTGACCAGACATCTGTTCGCTGCGGGCTTCTCGGCGCAACTCGTGAAGATGG
TGATCGACAACCTGCCCGAAGTCGACGGCATGGACGAGGGTATGGAGTGGGTGCGGACGGTGCTCGAATCGAACGTGCCC
GTGATGGAGAACGAAGACGCGTTGATGGAGCGCGGCGGCGTGTTCGCGCTGATGGGCCCGACGGGCGTCGGCAAGACCAC
GACCACGGCCAAGCTCGCCGCGCGCTGCGTGATGCGCTTCGGCGCCAGCAAGGTCGCGCTGCTCACCACCGACAGCTACC
GGATCGGCGGCCATGAGCAACTGCGTATCTTCGGCAAGATCCTCGGTGTGTCGGTGCATGCGGTAAAGGACAGCGCCGAT
CTGACGCTCGCGCTCTCGGAACTGCGCAACAAGCACATCGTGCTGATCGACACAATCGGCATGAGCCAGCGCGACCGCCT
TGTGTCCGACCAGATCGCGATGCTGTGCCGCGCCGGTCAGCCCGTGCAGCGCCTCTTGCTGCTGAACGCGACGAGCCACG
GCGACACGCTGAACGAAGTCGTGCAGGCCTATCAGAACGCGCCGGACCAGCAACCGCTCGCCGGCTGCATCCTGACCAAG
CTCGACGAAGCGACCAATCTGGGCAGCGTGCTCGACACGGTGATCCGGTACAAGCTGCCCGTGCATTACGCATCGACGGG
ACAGAAGGTGCCGGAGAACCTCTACGTCGCGACGAAGAAATTCCTGATCAAGAGCGCCTTCTGCATTCCGCGCGACAACT
CGCCGTTCGTCCCGCAGGACGAAGACGTGCCGGCACTGCTGTCGGCCTTGTCGGCCCGTTCGACCGCCGATCTGCATGAG
GTTCGCTTTGGATAA

Upstream 100 bases:

>100_bases
GCGCGTGCACCGAATGCCTGAATTGCCAGCGTTTCACCGTCTTTATTGCCCGATGGTGCCTGGTCATCTTTCGCAATAAT
TCATTGCATCGGGAAACGGT

Downstream 100 bases:

>100_bases
GTTCGTGCTGGACCAGGCAGAAGGACTGAGGCGTCTGCTCGCACGCTCAGGCTCGCGGATTGTGGCCGTCGCAGGCGGTT
CGCGCGGCGTGGGCGTGACG

Product: flagellar biosynthesis regulator FlhF

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 644; Mature: 643

Protein sequence:

>644_residues
MSPVRAAHRRISLNIRKFVGATSRDALRLVREALGSDAVVLSNRTNEDGTVEIVAVADRDLSAIAPRGQEGAASGSPNAG
ANAAAGGARAPVAPTASPTQPSALSMPVNPYASGMPDVFSSVFGASPEAGTERMPAASEEKPEPQTATAADAAADSPAVN
AARATDDVRVELRAEARSEVPAAPAAAVKPTATAMPEAPVRQRTMAETNPWLIDHARRIAAKDVVPAANPTMTPAAAVAR
GLGTPVDAVNEEAKPDWAREAAQLAARRAAHKGHVTPTVAEGASDINTARDARKGAAGDITPKVAAALTESIQSRIEQMV
NETVMHELGAMRGMMEEQFAGLLWADRQRRSPTHAALTRHLFAAGFSAQLVKMVIDNLPEVDGMDEGMEWVRTVLESNVP
VMENEDALMERGGVFALMGPTGVGKTTTTAKLAARCVMRFGASKVALLTTDSYRIGGHEQLRIFGKILGVSVHAVKDSAD
LTLALSELRNKHIVLIDTIGMSQRDRLVSDQIAMLCRAGQPVQRLLLLNATSHGDTLNEVVQAYQNAPDQQPLAGCILTK
LDEATNLGSVLDTVIRYKLPVHYASTGQKVPENLYVATKKFLIKSAFCIPRDNSPFVPQDEDVPALLSALSARSTADLHE
VRFG

Sequences:

>Translated_644_residues
MSPVRAAHRRISLNIRKFVGATSRDALRLVREALGSDAVVLSNRTNEDGTVEIVAVADRDLSAIAPRGQEGAASGSPNAG
ANAAAGGARAPVAPTASPTQPSALSMPVNPYASGMPDVFSSVFGASPEAGTERMPAASEEKPEPQTATAADAAADSPAVN
AARATDDVRVELRAEARSEVPAAPAAAVKPTATAMPEAPVRQRTMAETNPWLIDHARRIAAKDVVPAANPTMTPAAAVAR
GLGTPVDAVNEEAKPDWAREAAQLAARRAAHKGHVTPTVAEGASDINTARDARKGAAGDITPKVAAALTESIQSRIEQMV
NETVMHELGAMRGMMEEQFAGLLWADRQRRSPTHAALTRHLFAAGFSAQLVKMVIDNLPEVDGMDEGMEWVRTVLESNVP
VMENEDALMERGGVFALMGPTGVGKTTTTAKLAARCVMRFGASKVALLTTDSYRIGGHEQLRIFGKILGVSVHAVKDSAD
LTLALSELRNKHIVLIDTIGMSQRDRLVSDQIAMLCRAGQPVQRLLLLNATSHGDTLNEVVQAYQNAPDQQPLAGCILTK
LDEATNLGSVLDTVIRYKLPVHYASTGQKVPENLYVATKKFLIKSAFCIPRDNSPFVPQDEDVPALLSALSARSTADLHE
VRFG
>Mature_643_residues
SPVRAAHRRISLNIRKFVGATSRDALRLVREALGSDAVVLSNRTNEDGTVEIVAVADRDLSAIAPRGQEGAASGSPNAGA
NAAAGGARAPVAPTASPTQPSALSMPVNPYASGMPDVFSSVFGASPEAGTERMPAASEEKPEPQTATAADAAADSPAVNA
ARATDDVRVELRAEARSEVPAAPAAAVKPTATAMPEAPVRQRTMAETNPWLIDHARRIAAKDVVPAANPTMTPAAAVARG
LGTPVDAVNEEAKPDWAREAAQLAARRAAHKGHVTPTVAEGASDINTARDARKGAAGDITPKVAAALTESIQSRIEQMVN
ETVMHELGAMRGMMEEQFAGLLWADRQRRSPTHAALTRHLFAAGFSAQLVKMVIDNLPEVDGMDEGMEWVRTVLESNVPV
MENEDALMERGGVFALMGPTGVGKTTTTAKLAARCVMRFGASKVALLTTDSYRIGGHEQLRIFGKILGVSVHAVKDSADL
TLALSELRNKHIVLIDTIGMSQRDRLVSDQIAMLCRAGQPVQRLLLLNATSHGDTLNEVVQAYQNAPDQQPLAGCILTKL
DEATNLGSVLDTVIRYKLPVHYASTGQKVPENLYVATKKFLIKSAFCIPRDNSPFVPQDEDVPALLSALSARSTADLHEV
RFG

Specific function: Necessary for flagellar biosynthesis. May be involved in translocation of the flagellum [H]

COG id: COG1419

COG function: function code N; Flagellar GTP-binding protein

Gene ontology:

Cell location: Cell membrane; Peripheral membrane protein; Cytoplasmic side [H]

Metaboloic importance: Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the GTP-binding SRP family [H]

Homologues:

Organism=Escherichia coli, GI1789874, Length=189, Percent_Identity=26.4550264550265, Blast_Score=63, Evalue=5e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003593
- InterPro:   IPR000897
- InterPro:   IPR020006 [H]

Pfam domain/function: PF00448 SRP54 [H]

EC number: NA

Molecular weight: Translated: 68171; Mature: 68040

Theoretical pI: Translated: 6.59; Mature: 6.59

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
3.3 %Met     (Translated Protein)
3.9 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
3.1 %Met     (Mature Protein)
3.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSPVRAAHRRISLNIRKFVGATSRDALRLVREALGSDAVVLSNRTNEDGTVEIVAVADRD
CCCHHHHHHHHHEEHHHHHCCCCHHHHHHHHHHHCCCEEEEECCCCCCCCEEEEEECCCC
LSAIAPRGQEGAASGSPNAGANAAAGGARAPVAPTASPTQPSALSMPVNPYASGMPDVFS
HHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEECCCCCCCCCCHHHHH
SVFGASPEAGTERMPAASEEKPEPQTATAADAAADSPAVNAARATDDVRVELRAEARSEV
HHHCCCCCCCCCCCCCCCCCCCCCCCHHHHHHCCCCCCCCHHHCCCCEEEEEEHHHHHCC
PAAPAAAVKPTATAMPEAPVRQRTMAETNPWLIDHARRIAAKDVVPAANPTMTPAAAVAR
CCCCCCCCCCCHHCCCCCCHHHHHHHCCCCHHHHHHHHHHHHHCCCCCCCCCCHHHHHHH
GLGTPVDAVNEEAKPDWAREAAQLAARRAAHKGHVTPTVAEGASDINTARDARKGAAGDI
HCCCCHHHHCCCCCCHHHHHHHHHHHHHHHHCCCCCCHHHCCCHHHHHHHHHHCCCCCCC
TPKVAAALTESIQSRIEQMVNETVMHELGAMRGMMEEQFAGLLWADRQRRSPTHAALTRH
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHH
LFAAGFSAQLVKMVIDNLPEVDGMDEGMEWVRTVLESNVPVMENEDALMERGGVFALMGP
HHHHCHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHCCCCCCCCCHHHHHCCCEEEEECC
TGVGKTTTTAKLAARCVMRFGASKVALLTTDSYRIGGHEQLRIFGKILGVSVHAVKDSAD
CCCCCCHHHHHHHHHHHHHHCCCEEEEEEECCEECCCHHHHHHHHHHHHCEEEEECCCCC
LTLALSELRNKHIVLIDTIGMSQRDRLVSDQIAMLCRAGQPVQRLLLLNATSHGDTLNEV
HHHHHHHHCCCCEEEEEECCCCHHHHHHHHHHHHHHHCCCHHHHHHHHCCCCCCHHHHHH
VQAYQNAPDQQPLAGCILTKLDEATNLGSVLDTVIRYKLPVHYASTGQKVPENLYVATKK
HHHHHCCCCCCHHHHHHHHHHHHHCCHHHHHHHHHHHHCCEEECCCCCCCCHHHHHHHHH
FLIKSAFCIPRDNSPFVPQDEDVPALLSALSARSTADLHEVRFG
HHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHCCCCHHHHHCCC
>Mature Secondary Structure 
SPVRAAHRRISLNIRKFVGATSRDALRLVREALGSDAVVLSNRTNEDGTVEIVAVADRD
CCHHHHHHHHHEEHHHHHCCCCHHHHHHHHHHHCCCEEEEECCCCCCCCEEEEEECCCC
LSAIAPRGQEGAASGSPNAGANAAAGGARAPVAPTASPTQPSALSMPVNPYASGMPDVFS
HHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEECCCCCCCCCCHHHHH
SVFGASPEAGTERMPAASEEKPEPQTATAADAAADSPAVNAARATDDVRVELRAEARSEV
HHHCCCCCCCCCCCCCCCCCCCCCCCHHHHHHCCCCCCCCHHHCCCCEEEEEEHHHHHCC
PAAPAAAVKPTATAMPEAPVRQRTMAETNPWLIDHARRIAAKDVVPAANPTMTPAAAVAR
CCCCCCCCCCCHHCCCCCCHHHHHHHCCCCHHHHHHHHHHHHHCCCCCCCCCCHHHHHHH
GLGTPVDAVNEEAKPDWAREAAQLAARRAAHKGHVTPTVAEGASDINTARDARKGAAGDI
HCCCCHHHHCCCCCCHHHHHHHHHHHHHHHHCCCCCCHHHCCCHHHHHHHHHHCCCCCCC
TPKVAAALTESIQSRIEQMVNETVMHELGAMRGMMEEQFAGLLWADRQRRSPTHAALTRH
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHH
LFAAGFSAQLVKMVIDNLPEVDGMDEGMEWVRTVLESNVPVMENEDALMERGGVFALMGP
HHHHCHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHCCCCCCCCCHHHHHCCCEEEEECC
TGVGKTTTTAKLAARCVMRFGASKVALLTTDSYRIGGHEQLRIFGKILGVSVHAVKDSAD
CCCCCCHHHHHHHHHHHHHHCCCEEEEEEECCEECCCHHHHHHHHHHHHCEEEEECCCCC
LTLALSELRNKHIVLIDTIGMSQRDRLVSDQIAMLCRAGQPVQRLLLLNATSHGDTLNEV
HHHHHHHHCCCCEEEEEECCCCHHHHHHHHHHHHHHHCCCHHHHHHHHCCCCCCHHHHHH
VQAYQNAPDQQPLAGCILTKLDEATNLGSVLDTVIRYKLPVHYASTGQKVPENLYVATKK
HHHHHCCCCCCHHHHHHHHHHHHHCCHHHHHHHHHHHHCCEEECCCCCCCCHHHHHHHHH
FLIKSAFCIPRDNSPFVPQDEDVPALLSALSARSTADLHEVRFG
HHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHCCCCHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 10984043 [H]