| Definition | Burkholderia phymatum STM815 chromosome chromosome 1, complete sequence. |
|---|---|
| Accession | NC_010622 |
| Length | 3,479,187 |
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The map label for this gene is flgL [H]
Identifier: 186477705
GI number: 186477705
Start: 3313788
End: 3315008
Strand: Direct
Name: flgL [H]
Synonym: Bphy_2959
Alternate gene names: 186477705
Gene position: 3313788-3315008 (Clockwise)
Preceding gene: 186477704
Following gene: 186477726
Centisome position: 95.25
GC content: 63.06
Gene sequence:
>1221_bases ATGCGCATCTCTACTTCGCAATATTTCGGCATGAACGTCCAGACGATGGACGATCAGCAATCGACGCTGGCGCAGCTGTA TCAGCAACTGTCGAGCGGCGTGAGCCTCGCGACGCCGTCGGACAATCCCGTGGGCGCGGCGCAGGCCGTGCAGCTCAGCA TGCAGGGCGCGACGCTGTCGCAGTATGCGAGCAACCAGAACACTGCCCTGCAGGCGCTGCAATCGGAAGACGGCTCGCTG TCCAGCGTCAACACCGTGCTGACCACGATCAACACGCTGCTCGTGCGCGCCGGCGACGGCTCGCTGAACGACGGCGACCG CGGCGATATCGCGACCCAGCTGCAAGGCATCCGCAGCCAGCTGATGGGGCTCGCGAACGGCACGGACGGCTCGGGCAACT ATCTGTACGCCGGCTATCAGGCATCGACGCCGCCGTTCTCGGTCGACGCTAGCGGCGCCGTGCAATACAACGGCGACAAC GGCATCCAGCACGTGCAGGTGACGGGCACTCGCAACATCGCAATCGGCGATACAGGCCGCGACGTGTTCCTCGGCATTTC GCCCGCGGGCAGCTCGCCGGTGACTGCGGGCAATTCGTCCAACACGGGGTCGGGCACGATCGGAAACGTGTCGGTGAGCA ACCCGACCGATCCGACGAACCAGCACAAGTACACGATCAACTTCACGTCGACGACCACGTACACGATCACGGACGTCACA GCGGCGACGACGAGCGCGCCGCAGACGTACGCGGCGGGCCAGGCGATCACGCTGGGCGGCGGCGGTCAGAATGTGACGAT CTCGGGCGCACCGAATGCGGGCGATTCGTTCTCGGTGACGCCGGCGGCACAATCGAGCACGGACGTATTCGCGAACCTCG ACAAGGTGATTGCCGCGCTGCAAACGTCCGTTTCGGGCGCGGGCGGTCAGGCGAATCTGACGAACGCGTTGGGCACGGCG ATGACCCAGTTGCACAACACGATGAACAACGTGACGTCGATTCAGACGTCCGTCGGCGGACGCGAGCAGGAGATCGAGGC GCTGCAGACCGTCACGCAGACTAATTCGCTGCAGACGAGCAGCAATCTTGCTGATCTGACGCAGACGGATCTGACGTCGA CGATCAGCAAGTACACAATGACCCAGTTTTCGCTGCAGGCCGCGCAGCAGGGCTTCTCGATGATTCAGAAGTTGTCGTTG TTCGATTACATCGGGAATTGA
Upstream 100 bases:
>100_bases AATACCAGCAGCTGTATCAGGCGAACAGCAAGGTCATCCAGACCGCACAGACGCTGTTCCAGACGATCCTCGGCATCTTC AATTGAGGCGTTGAACGCAT
Downstream 100 bases:
>100_bases TTGCCGGGGTCACCGGAAGTACTTCGTCTCGGCGACGCCTGGCTCTTTTTTGGAGGACTGGGCGTTTTTGCTTTTTGCTT CAGCGCTGGCATCCGCGCTT
Product: flagellar hook-associated protein FlgL
Products: NA
Alternate protein names: HAP3; Hook-filament junction protein [H]
Number of amino acids: Translated: 406; Mature: 406
Protein sequence:
>406_residues MRISTSQYFGMNVQTMDDQQSTLAQLYQQLSSGVSLATPSDNPVGAAQAVQLSMQGATLSQYASNQNTALQALQSEDGSL SSVNTVLTTINTLLVRAGDGSLNDGDRGDIATQLQGIRSQLMGLANGTDGSGNYLYAGYQASTPPFSVDASGAVQYNGDN GIQHVQVTGTRNIAIGDTGRDVFLGISPAGSSPVTAGNSSNTGSGTIGNVSVSNPTDPTNQHKYTINFTSTTTYTITDVT AATTSAPQTYAAGQAITLGGGGQNVTISGAPNAGDSFSVTPAAQSSTDVFANLDKVIAALQTSVSGAGGQANLTNALGTA MTQLHNTMNNVTSIQTSVGGREQEIEALQTVTQTNSLQTSSNLADLTQTDLTSTISKYTMTQFSLQAAQQGFSMIQKLSL FDYIGN
Sequences:
>Translated_406_residues MRISTSQYFGMNVQTMDDQQSTLAQLYQQLSSGVSLATPSDNPVGAAQAVQLSMQGATLSQYASNQNTALQALQSEDGSL SSVNTVLTTINTLLVRAGDGSLNDGDRGDIATQLQGIRSQLMGLANGTDGSGNYLYAGYQASTPPFSVDASGAVQYNGDN GIQHVQVTGTRNIAIGDTGRDVFLGISPAGSSPVTAGNSSNTGSGTIGNVSVSNPTDPTNQHKYTINFTSTTTYTITDVT AATTSAPQTYAAGQAITLGGGGQNVTISGAPNAGDSFSVTPAAQSSTDVFANLDKVIAALQTSVSGAGGQANLTNALGTA MTQLHNTMNNVTSIQTSVGGREQEIEALQTVTQTNSLQTSSNLADLTQTDLTSTISKYTMTQFSLQAAQQGFSMIQKLSL FDYIGN >Mature_406_residues MRISTSQYFGMNVQTMDDQQSTLAQLYQQLSSGVSLATPSDNPVGAAQAVQLSMQGATLSQYASNQNTALQALQSEDGSL SSVNTVLTTINTLLVRAGDGSLNDGDRGDIATQLQGIRSQLMGLANGTDGSGNYLYAGYQASTPPFSVDASGAVQYNGDN GIQHVQVTGTRNIAIGDTGRDVFLGISPAGSSPVTAGNSSNTGSGTIGNVSVSNPTDPTNQHKYTINFTSTTTYTITDVT AATTSAPQTYAAGQAITLGGGGQNVTISGAPNAGDSFSVTPAAQSSTDVFANLDKVIAALQTSVSGAGGQANLTNALGTA MTQLHNTMNNVTSIQTSVGGREQEIEALQTVTQTNSLQTSSNLADLTQTDLTSTISKYTMTQFSLQAAQQGFSMIQKLSL FDYIGN
Specific function: Unknown
COG id: COG1344
COG function: function code N; Flagellin and related hook-associated proteins
Gene ontology:
Cell location: Secreted. Bacterial flagellum [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the bacterial flagellin family [H]
Homologues:
Organism=Escherichia coli, GI1787324, Length=201, Percent_Identity=37.3134328358209, Blast_Score=124, Evalue=8e-30,
Paralogues:
None
Copy number: 10-20 (rich media) [C]
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR013384 - InterPro: IPR001029 [H]
Pfam domain/function: PF00669 Flagellin_N [H]
EC number: NA
Molecular weight: Translated: 41776; Mature: 41776
Theoretical pI: Translated: 4.05; Mature: 4.05
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 2.2 %Met (Translated Protein) 2.2 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 2.2 %Met (Mature Protein) 2.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRISTSQYFGMNVQTMDDQQSTLAQLYQQLSSGVSLATPSDNPVGAAQAVQLSMQGATLS CCCCCCCCCCCEEEECCCHHHHHHHHHHHHHCCCEEECCCCCCCCCHHEEEEEECCCHHH QYASNQNTALQALQSEDGSLSSVNTVLTTINTLLVRAGDGSLNDGDRGDIATQLQGIRSQ HHHCCCCHHHHHHHCCCCCHHHHHHHHHHHHHHEEECCCCCCCCCCCCHHHHHHHHHHHH LMGLANGTDGSGNYLYAGYQASTPPFSVDASGAVQYNGDNGIQHVQVTGTRNIAIGDTGR HHHCCCCCCCCCCEEEEEEECCCCCCCCCCCCEEEECCCCCEEEEEEECCCEEEECCCCC DVFLGISPAGSSPVTAGNSSNTGSGTIGNVSVSNPTDPTNQHKYTINFTSTTTYTITDVT EEEEEECCCCCCCEECCCCCCCCCCEEEEEEECCCCCCCCCEEEEEEEECCEEEEEEEEE AATTSAPQTYAAGQAITLGGGGQNVTISGAPNAGDSFSVTPAAQSSTDVFANLDKVIAAL ECCCCCCCHHCCCCEEEECCCCCEEEEECCCCCCCCEEECCCCCCCHHHHHHHHHHHHHH QTSVSGAGGQANLTNALGTAMTQLHNTMNNVTSIQTSVGGREQEIEALQTVTQTNSLQTS HHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHCCCCCC SNLADLTQTDLTSTISKYTMTQFSLQAAQQGFSMIQKLSLFDYIGN CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC >Mature Secondary Structure MRISTSQYFGMNVQTMDDQQSTLAQLYQQLSSGVSLATPSDNPVGAAQAVQLSMQGATLS CCCCCCCCCCCEEEECCCHHHHHHHHHHHHHCCCEEECCCCCCCCCHHEEEEEECCCHHH QYASNQNTALQALQSEDGSLSSVNTVLTTINTLLVRAGDGSLNDGDRGDIATQLQGIRSQ HHHCCCCHHHHHHHCCCCCHHHHHHHHHHHHHHEEECCCCCCCCCCCCHHHHHHHHHHHH LMGLANGTDGSGNYLYAGYQASTPPFSVDASGAVQYNGDNGIQHVQVTGTRNIAIGDTGR HHHCCCCCCCCCCEEEEEEECCCCCCCCCCCCEEEECCCCCEEEEEEECCCEEEECCCCC DVFLGISPAGSSPVTAGNSSNTGSGTIGNVSVSNPTDPTNQHKYTINFTSTTTYTITDVT EEEEEECCCCCCCEECCCCCCCCCCEEEEEEECCCCCCCCCEEEEEEEECCEEEEEEEEE AATTSAPQTYAAGQAITLGGGGQNVTISGAPNAGDSFSVTPAAQSSTDVFANLDKVIAAL ECCCCCCCHHCCCCEEEECCCCCEEEEECCCCCCCCEEECCCCCCCHHHHHHHHHHHHHH QTSVSGAGGQANLTNALGTAMTQLHNTMNNVTSIQTSVGGREQEIEALQTVTQTNSLQTS HHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHCCCCCC SNLADLTQTDLTSTISKYTMTQFSLQAAQQGFSMIQKLSLFDYIGN CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 2193164; 11677609 [H]