| Definition | Burkholderia phymatum STM815 chromosome chromosome 1, complete sequence. |
|---|---|
| Accession | NC_010622 |
| Length | 3,479,187 |
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The map label for this gene is flgK [H]
Identifier: 186477704
GI number: 186477704
Start: 3311800
End: 3313773
Strand: Direct
Name: flgK [H]
Synonym: Bphy_2958
Alternate gene names: 186477704
Gene position: 3311800-3313773 (Clockwise)
Preceding gene: 186477703
Following gene: 186477705
Centisome position: 95.19
GC content: 63.17
Gene sequence:
>1974_bases ATGTCGAGTAACCTTTTTAGCATCGGCCTTAGTGGACTCAATGCAGCCCAGTGGGGGCTGACGACTACGGGTCAGAACAT CAGCAACCAGGCGACGCCCGGCTACTCCGTCGAGCGTCCCGTCTACGCGGAATCGAGTGGTCAGTACACGGGCTCCGGCT ATCTCGGCAGCGGCGTATCGACGACGACCGTCCAGCGCCAGTACAGCCAGTACCTGACGACCGAGCTCAACAACGCGCAG TCGCAGTCCGGCTCGCTCAATTCTTACTACAACCTGATCGCCCAGCTCAACAACATGGTCGGCAGCCCGACTTCGGGTAT ATCCAGCGCGATCACGAGCTACTTCACCGGCCTGCAGAACGTCGCGAACGATGCATCGAATCCCGCGATGCGCCAAAGCG CCATCAGCAACGCGCAATCGTTGGCGGACCAGATCAATGCAGCAGGCGACCAGTACGACCAGCTGCGCACCAACGTCAAC ACGCAGCTCGGCGATACGGTCAAGCAGATCAACACCTACAGCTCGCAAATCGCACAGCTGAACGCGCAGATCCAGTCGCT GAGCGCACAAGGCCAACCACCCAACCAGTTGCTCGACCAGCGCGATCTCGCTGTGTCGAACCTGTCGCAACTGGTCGGCG TGCAGGTCGTGCAAGGCGATACCGGCTATAGCGTGTTCATGGGCAACGGCCAGCCGCTCGTCGTCGCCGACAAGAGCTTC AATCTTACGACGGTCACCTCGCCTGCCGATCCGACGGAAACGGCCGTTGCTTATGCAGGTCTCTCCAGCCTTGCAGGAAC GACGACGCCGCAAATCCTGCCCGACAGCACCCCGCTGGGAGGGCAGATCGGTGGGCTGATGACGTTCCGCAGCCAGACGC TGGACCCCGCCGAAGCGCAACTCGGCGCGATTGCGACGAGCTTCGCCGCGCAGGTCAACGCGCAGAACGCGCTCGGCATC GACCTGAATGGCAACAAGGGCGGCGCGCTCTTCACGGTCGGCAATCCGACCGTCTACGCGAACGCCAACAACACGGGCGG CGCAACGCTGGGCGCGACGCTGTCGAATCCGTCGCAACCCGTATCGGGCGACTACTCGCTGGCGTACGACGGCACGAACT ACACGTTGACCAACCGCGACACGGGCCAGGTTGTCGGCCAGGCGTCGAGCCTGACCAGCCCGATCGGCGGCATCCAGTTC AACCTGTCGGGCACGATGAACGCTGGCGATTCGTTCACCGTCGAACCGACGCGCGGCGCGCTCAACGGCTTCGCGCTGAC GACGAGCGACGGCTCGGCGATCGCCGCTTCATCGCCGGTTCTCGTGTCGACGGGCACGGCGAACACGGGCACGTCGACAG TCACGCAAGGCACGGTGTCGTCGGGCTACACCTTGCCGAGCACTTCGACGACACTCACGTACAACTCGGCGACGGGGTCG CTGTCCGGCTTCCCCGTCGGCTCCACCGTGACGATCGACGGCACGCCGCCGACTTCGTACAACATCACGGCGACAACGAC GCCCGTGCCGTATAACCCGGCCACGGGCGCGTCGATGACGATCACGGGCGCGGCGATCAACAACGTGTCGCTGCAGATCA CGGGCTCGCCCGCGAACGGCGACACCTACACGATCGCGCCGAACCCGGCGGGCGGCAAAGACGGCCGCAACGCCCAGCTG ATCTCGAATCTCGTGACAGCGAAGTCGATGGGCAACGGCACGCTGACGCTGACCGACTCGTACGCGAACTACGTGAACGA CATCGGCAACCAGACGAATCAGGTTCAGACGTCGAACAAGGCGCAGTCGGCGCTCGTGACGCAGATCACGACGGCGCAGC AAGCCATTTCGGGCGTGAACATCAACGAAGAAGCGGCGAACCTGCTGCAATACCAGCAGCTGTATCAGGCGAACAGCAAG GTCATCCAGACCGCACAGACGCTGTTCCAGACGATCCTCGGCATCTTCAATTGA
Upstream 100 bases:
>100_bases TACGCCCTCAATGTTCCGGCGCCCAGGCCGATATATGAAGTGTTCGGTCAACCTGGCAGTGCTCACGCGCTGCCCCTTAC GCCGTCTTTCAGGATGACGC
Downstream 100 bases:
>100_bases GGCGTTGAACGCATATGCGCATCTCTACTTCGCAATATTTCGGCATGAACGTCCAGACGATGGACGATCAGCAATCGACG CTGGCGCAGCTGTATCAGCA
Product: flagellar hook-associated protein FlgK
Products: NA
Alternate protein names: HAP1 [H]
Number of amino acids: Translated: 657; Mature: 656
Protein sequence:
>657_residues MSSNLFSIGLSGLNAAQWGLTTTGQNISNQATPGYSVERPVYAESSGQYTGSGYLGSGVSTTTVQRQYSQYLTTELNNAQ SQSGSLNSYYNLIAQLNNMVGSPTSGISSAITSYFTGLQNVANDASNPAMRQSAISNAQSLADQINAAGDQYDQLRTNVN TQLGDTVKQINTYSSQIAQLNAQIQSLSAQGQPPNQLLDQRDLAVSNLSQLVGVQVVQGDTGYSVFMGNGQPLVVADKSF NLTTVTSPADPTETAVAYAGLSSLAGTTTPQILPDSTPLGGQIGGLMTFRSQTLDPAEAQLGAIATSFAAQVNAQNALGI DLNGNKGGALFTVGNPTVYANANNTGGATLGATLSNPSQPVSGDYSLAYDGTNYTLTNRDTGQVVGQASSLTSPIGGIQF NLSGTMNAGDSFTVEPTRGALNGFALTTSDGSAIAASSPVLVSTGTANTGTSTVTQGTVSSGYTLPSTSTTLTYNSATGS LSGFPVGSTVTIDGTPPTSYNITATTTPVPYNPATGASMTITGAAINNVSLQITGSPANGDTYTIAPNPAGGKDGRNAQL ISNLVTAKSMGNGTLTLTDSYANYVNDIGNQTNQVQTSNKAQSALVTQITTAQQAISGVNINEEAANLLQYQQLYQANSK VIQTAQTLFQTILGIFN
Sequences:
>Translated_657_residues MSSNLFSIGLSGLNAAQWGLTTTGQNISNQATPGYSVERPVYAESSGQYTGSGYLGSGVSTTTVQRQYSQYLTTELNNAQ SQSGSLNSYYNLIAQLNNMVGSPTSGISSAITSYFTGLQNVANDASNPAMRQSAISNAQSLADQINAAGDQYDQLRTNVN TQLGDTVKQINTYSSQIAQLNAQIQSLSAQGQPPNQLLDQRDLAVSNLSQLVGVQVVQGDTGYSVFMGNGQPLVVADKSF NLTTVTSPADPTETAVAYAGLSSLAGTTTPQILPDSTPLGGQIGGLMTFRSQTLDPAEAQLGAIATSFAAQVNAQNALGI DLNGNKGGALFTVGNPTVYANANNTGGATLGATLSNPSQPVSGDYSLAYDGTNYTLTNRDTGQVVGQASSLTSPIGGIQF NLSGTMNAGDSFTVEPTRGALNGFALTTSDGSAIAASSPVLVSTGTANTGTSTVTQGTVSSGYTLPSTSTTLTYNSATGS LSGFPVGSTVTIDGTPPTSYNITATTTPVPYNPATGASMTITGAAINNVSLQITGSPANGDTYTIAPNPAGGKDGRNAQL ISNLVTAKSMGNGTLTLTDSYANYVNDIGNQTNQVQTSNKAQSALVTQITTAQQAISGVNINEEAANLLQYQQLYQANSK VIQTAQTLFQTILGIFN >Mature_656_residues SSNLFSIGLSGLNAAQWGLTTTGQNISNQATPGYSVERPVYAESSGQYTGSGYLGSGVSTTTVQRQYSQYLTTELNNAQS QSGSLNSYYNLIAQLNNMVGSPTSGISSAITSYFTGLQNVANDASNPAMRQSAISNAQSLADQINAAGDQYDQLRTNVNT QLGDTVKQINTYSSQIAQLNAQIQSLSAQGQPPNQLLDQRDLAVSNLSQLVGVQVVQGDTGYSVFMGNGQPLVVADKSFN LTTVTSPADPTETAVAYAGLSSLAGTTTPQILPDSTPLGGQIGGLMTFRSQTLDPAEAQLGAIATSFAAQVNAQNALGID LNGNKGGALFTVGNPTVYANANNTGGATLGATLSNPSQPVSGDYSLAYDGTNYTLTNRDTGQVVGQASSLTSPIGGIQFN LSGTMNAGDSFTVEPTRGALNGFALTTSDGSAIAASSPVLVSTGTANTGTSTVTQGTVSSGYTLPSTSTTLTYNSATGSL SGFPVGSTVTIDGTPPTSYNITATTTPVPYNPATGASMTITGAAINNVSLQITGSPANGDTYTIAPNPAGGKDGRNAQLI SNLVTAKSMGNGTLTLTDSYANYVNDIGNQTNQVQTSNKAQSALVTQITTAQQAISGVNINEEAANLLQYQQLYQANSKV IQTAQTLFQTILGIFN
Specific function: Unknown
COG id: COG1256
COG function: function code N; Flagellar hook-associated protein
Gene ontology:
Cell location: Secreted. Bacterial flagellum (By similarity) [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the flagella basal body rod proteins family [H]
Homologues:
Organism=Escherichia coli, GI1787323, Length=444, Percent_Identity=36.036036036036, Blast_Score=254, Evalue=9e-69,
Paralogues:
None
Copy number: 10-20 (rich media) [C]
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR010930 - InterPro: IPR001444 - InterPro: IPR002371 [H]
Pfam domain/function: PF06429 DUF1078; PF00460 Flg_bb_rod [H]
EC number: NA
Molecular weight: Translated: 67333; Mature: 67202
Theoretical pI: Translated: 4.00; Mature: 4.00
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 1.2 %Met (Translated Protein) 1.2 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.1 %Met (Mature Protein) 1.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSSNLFSIGLSGLNAAQWGLTTTGQNISNQATPGYSVERPVYAESSGQYTGSGYLGSGVS CCCCEEEEECCCCCHHHCCCEECCCCCCCCCCCCCCCCCCEEECCCCCCCCCCCCCCCCC TTTVQRQYSQYLTTELNNAQSQSGSLNSYYNLIAQLNNMVGSPTSGISSAITSYFTGLQN HHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHH VANDASNPAMRQSAISNAQSLADQINAAGDQYDQLRTNVNTQLGDTVKQINTYSSQIAQL HHCCCCCHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHCCCCHHHHHHHHHHHHHHHHHHH NAQIQSLSAQGQPPNQLLDQRDLAVSNLSQLVGVQVVQGDTGYSVFMGNGQPLVVADKSF HHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHCEEEEECCCCCEEEECCCCEEEEECCCC NLTTVTSPADPTETAVAYAGLSSLAGTTTPQILPDSTPLGGQIGGLMTFRSQTLDPAEAQ CEEEECCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCEEEECCCCCCHHHHH LGAIATSFAAQVNAQNALGIDLNGNKGGALFTVGNPTVYANANNTGGATLGATLSNPSQP HHHHHHHHHHHCCCCCEEEEEECCCCCCEEEEECCCEEEECCCCCCCEEEEEECCCCCCC VSGDYSLAYDGTNYTLTNRDTGQVVGQASSLTSPIGGIQFNLSGTMNAGDSFTVEPTRGA CCCCEEEEECCCCEEECCCCCHHHHCCHHHHCCCCCCEEEEECCCCCCCCCEEECCCCCC LNGFALTTSDGSAIAASSPVLVSTGTANTGTSTVTQGTVSSGYTLPSTSTTLTYNSATGS CCCEEEEECCCCEEECCCCEEEECCCCCCCCCCEECCCCCCCEECCCCCEEEEECCCCCC LSGFPVGSTVTIDGTPPTSYNITATTTPVPYNPATGASMTITGAAINNVSLQITGSPANG CCCCCCCCEEEECCCCCCCEEEEEECCCCCCCCCCCCEEEEEEEEECCEEEEEEECCCCC DTYTIAPNPAGGKDGRNAQLISNLVTAKSMGNGTLTLTDSYANYVNDIGNQTNQVQTSNK CEEEECCCCCCCCCCCCHHHHHHHHHHHCCCCCEEEEEHHHHHHHHHHCCCCCCEECCCH AQSALVTQITTAQQAISGVNINEEAANLLQYQQLYQANSKVIQTAQTLFQTILGIFN HHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC >Mature Secondary Structure SSNLFSIGLSGLNAAQWGLTTTGQNISNQATPGYSVERPVYAESSGQYTGSGYLGSGVS CCCEEEEECCCCCHHHCCCEECCCCCCCCCCCCCCCCCCEEECCCCCCCCCCCCCCCCC TTTVQRQYSQYLTTELNNAQSQSGSLNSYYNLIAQLNNMVGSPTSGISSAITSYFTGLQN HHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHH VANDASNPAMRQSAISNAQSLADQINAAGDQYDQLRTNVNTQLGDTVKQINTYSSQIAQL HHCCCCCHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHCCCCHHHHHHHHHHHHHHHHHHH NAQIQSLSAQGQPPNQLLDQRDLAVSNLSQLVGVQVVQGDTGYSVFMGNGQPLVVADKSF HHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHCEEEEECCCCCEEEECCCCEEEEECCCC NLTTVTSPADPTETAVAYAGLSSLAGTTTPQILPDSTPLGGQIGGLMTFRSQTLDPAEAQ CEEEECCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCEEEECCCCCCHHHHH LGAIATSFAAQVNAQNALGIDLNGNKGGALFTVGNPTVYANANNTGGATLGATLSNPSQP HHHHHHHHHHHCCCCCEEEEEECCCCCCEEEEECCCEEEECCCCCCCEEEEEECCCCCCC VSGDYSLAYDGTNYTLTNRDTGQVVGQASSLTSPIGGIQFNLSGTMNAGDSFTVEPTRGA CCCCEEEEECCCCEEECCCCCHHHHCCHHHHCCCCCCEEEEECCCCCCCCCEEECCCCCC LNGFALTTSDGSAIAASSPVLVSTGTANTGTSTVTQGTVSSGYTLPSTSTTLTYNSATGS CCCEEEEECCCCEEECCCCEEEECCCCCCCCCCEECCCCCCCEECCCCCEEEEECCCCCC LSGFPVGSTVTIDGTPPTSYNITATTTPVPYNPATGASMTITGAAINNVSLQITGSPANG CCCCCCCCEEEECCCCCCCEEEEEECCCCCCCCCCCCEEEEEEEEECCEEEEEEECCCCC DTYTIAPNPAGGKDGRNAQLISNLVTAKSMGNGTLTLTDSYANYVNDIGNQTNQVQTSNK CEEEECCCCCCCCCCCCHHHHHHHHHHHCCCCCEEEEEHHHHHHHHHHCCCCCCEECCCH AQSALVTQITTAQQAISGVNINEEAANLLQYQQLYQANSKVIQTAQTLFQTILGIFN HHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 8905232; 9278503; 8158647 [H]