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The map label for this gene is flgD [H]

Identifier: 186477696

GI number: 186477696

Start: 3302900

End: 3303613

Strand: Direct

Name: flgD [H]

Synonym: Bphy_2950

Alternate gene names: 186477696

Gene position: 3302900-3303613 (Clockwise)

Preceding gene: 186477695

Following gene: 186477697

Centisome position: 94.93

GC content: 63.73

Gene sequence:

>714_bases
TTGACTACCAGCACCACTATCGGCAACAACGGCGCGACGGTTTCGCAGACATTGCTCGACACGATGAACGGCGCGAAGAG
TGCGTCGTCGTCGAGCAGCTCGTCGAGCGCGACCTCGGGCAGCGACCTGCAGAACACTTTCCTGCAACTGCTCATCGCGC
AGATGAAGAACCAGGATCCGACGAGCCCGATGGACAGCTCGCAGATGACCTCTCAGCTCGCGCAGATCAACACGGTGACG
GGCATCGGCCAGCTGAATTCGTCGCTGACCTCGCTCGCTTCGCAACTCACGACCAACCAGCAAACGCAGGCCGCGAACCT
GATCAATTCGACGGTGCTCGCACCGGGGGACAGCTTCTCGGTGTCGTCGGGCAAGGCAACGGGCTTCGGCGTCACGCTCG
CCAGCGACGCGACGGACGTGCAGGTCACGGTCAAGAACTCGGCAGGCCAGATCGTCAACACGATCGACCTCGGCAAGCAG
TCGGCAGGCACGATTCCCGTCGGCTGGACACCCGTCGACAAGAGCGGCAACGCGCTGCCCGACGGCACCTACACATTCAC
GGCAGCCAGCACGACGGCAAACGGCACGGGCGCTCCTACCACGCTGTCGGCCGCGACCGTGCAGGGTGTCCTCAAGCAGC
CGGACGGCACGCCTGGCCTCGTTCTGTCGAACGGCAAAACGGTTGGCCTGTCGACGGTCGCCGCCATTATCTAA

Upstream 100 bases:

>100_bases
TTTCGGCATCGCGCTCTTACCAGGCCAACGTCGAAACGCTCAACACCGCGAAACAGCTGATGCTGAAGACGCTCACGATC
GGAACCTGAGGAGAAGCTCC

Downstream 100 bases:

>100_bases
ACGCATTCAGCATCACCCGATACGGAGACCGTCATGGGTTACCAACAAGGATTGAGCGGACTGGCAGGCGCATCGAGCGA
CCTCGACGTCATCGGCAACA

Product: flagellar basal body rod modification protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 237; Mature: 236

Protein sequence:

>237_residues
MTTSTTIGNNGATVSQTLLDTMNGAKSASSSSSSSSATSGSDLQNTFLQLLIAQMKNQDPTSPMDSSQMTSQLAQINTVT
GIGQLNSSLTSLASQLTTNQQTQAANLINSTVLAPGDSFSVSSGKATGFGVTLASDATDVQVTVKNSAGQIVNTIDLGKQ
SAGTIPVGWTPVDKSGNALPDGTYTFTAASTTANGTGAPTTLSAATVQGVLKQPDGTPGLVLSNGKTVGLSTVAAII

Sequences:

>Translated_237_residues
MTTSTTIGNNGATVSQTLLDTMNGAKSASSSSSSSSATSGSDLQNTFLQLLIAQMKNQDPTSPMDSSQMTSQLAQINTVT
GIGQLNSSLTSLASQLTTNQQTQAANLINSTVLAPGDSFSVSSGKATGFGVTLASDATDVQVTVKNSAGQIVNTIDLGKQ
SAGTIPVGWTPVDKSGNALPDGTYTFTAASTTANGTGAPTTLSAATVQGVLKQPDGTPGLVLSNGKTVGLSTVAAII
>Mature_236_residues
TTSTTIGNNGATVSQTLLDTMNGAKSASSSSSSSSATSGSDLQNTFLQLLIAQMKNQDPTSPMDSSQMTSQLAQINTVTG
IGQLNSSLTSLASQLTTNQQTQAANLINSTVLAPGDSFSVSSGKATGFGVTLASDATDVQVTVKNSAGQIVNTIDLGKQS
AGTIPVGWTPVDKSGNALPDGTYTFTAASTTANGTGAPTTLSAATVQGVLKQPDGTPGLVLSNGKTVGLSTVAAII

Specific function: Required for flagellar hook formation. May act as a scaffolding protein [H]

COG id: COG1843

COG function: function code N; Flagellar hook capping protein

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the flgD family [H]

Homologues:

Organism=Escherichia coli, GI1787315, Length=179, Percent_Identity=39.1061452513966, Blast_Score=124, Evalue=7e-30,

Paralogues:

None

Copy number: 10-20 (rich media) [C]

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR005648 [H]

Pfam domain/function: PF03963 FlgD [H]

EC number: NA

Molecular weight: Translated: 23609; Mature: 23478

Theoretical pI: Translated: 4.36; Mature: 4.36

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.1 %Met     (Translated Protein)
2.1 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.7 %Met     (Mature Protein)
1.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTTSTTIGNNGATVSQTLLDTMNGAKSASSSSSSSSATSGSDLQNTFLQLLIAQMKNQDP
CCCCCCCCCCCCHHHHHHHHHHCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCC
TSPMDSSQMTSQLAQINTVTGIGQLNSSLTSLASQLTTNQQTQAANLINSTVLAPGDSFS
CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHCCEECCCCCCC
VSSGKATGFGVTLASDATDVQVTVKNSAGQIVNTIDLGKQSAGTIPVGWTPVDKSGNALP
CCCCCCCCEEEEEECCCCEEEEEEECCCCCEEEHHHCCCCCCCCCCCCCCCCCCCCCCCC
DGTYTFTAASTTANGTGAPTTLSAATVQGVLKQPDGTPGLVLSNGKTVGLSTVAAII
CCCEEEEEECCCCCCCCCCCCHHHHHHHHHHHCCCCCCCEEEECCCEECHHHHHHHC
>Mature Secondary Structure 
TTSTTIGNNGATVSQTLLDTMNGAKSASSSSSSSSATSGSDLQNTFLQLLIAQMKNQDP
CCCCCCCCCCCHHHHHHHHHHCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCC
TSPMDSSQMTSQLAQINTVTGIGQLNSSLTSLASQLTTNQQTQAANLINSTVLAPGDSFS
CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHCCEECCCCCCC
VSSGKATGFGVTLASDATDVQVTVKNSAGQIVNTIDLGKQSAGTIPVGWTPVDKSGNALP
CCCCCCCCEEEEEECCCCEEEEEEECCCCCEEEHHHCCCCCCCCCCCCCCCCCCCCCCCC
DGTYTFTAASTTANGTGAPTTLSAATVQGVLKQPDGTPGLVLSNGKTVGLSTVAAII
CCCEEEEEECCCCCCCCCCCCHHHHHHHHHHHCCCCCCCEEEECCCEECHHHHHHHC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8905232; 9278503 [H]