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The map label for this gene is flgC [H]

Identifier: 186477695

GI number: 186477695

Start: 3302463

End: 3302888

Strand: Direct

Name: flgC [H]

Synonym: Bphy_2949

Alternate gene names: 186477695

Gene position: 3302463-3302888 (Clockwise)

Preceding gene: 186477694

Following gene: 186477696

Centisome position: 94.92

GC content: 63.85

Gene sequence:

>426_bases
ATGCCATCCCTGATGAACATTTTCAACGTCGCCGGTTCGGCGATGTCCGCGCAGTCGCAACGCCTGAACGTGACCGCGTC
GAACCTCGCGAACGCCGACAGTACGACGGGCCCCGACGGCAAGCCGTACAAGGCGAAGCAGGTCGTGTTCGCCGTCAACC
CGATCGGCGGCGCGCGCACGGGCTCCGGCCAGCAGGTCGGCGGCGTGCAGGTGACGGGCGTCATCGACGATCCGACGCCG
ATGAAGACGTCGTACGAGCCCGGCAACCCGGCCGCCGACGCAAACGGTTACGTGCAGTTGCCGAACGTCGACCCCGTGCA
GGAAATGGTCAACATGATTTCGGCATCGCGCTCTTACCAGGCCAACGTCGAAACGCTCAACACCGCGAAACAGCTGATGC
TGAAGACGCTCACGATCGGAACCTGA

Upstream 100 bases:

>100_bases
GCGCGGCCTTCCATAGAGAAGGCGGCGCGCTGGACCACGCTAGAAACCAGAACGCTACGGGATTAGACGCCGGTGCACCG
GCAAGAGAGGTCGAAAAGCC

Downstream 100 bases:

>100_bases
GGAGAAGCTCCTTGACTACCAGCACCACTATCGGCAACAACGGCGCGACGGTTTCGCAGACATTGCTCGACACGATGAAC
GGCGCGAAGAGTGCGTCGTC

Product: flagellar basal body rod protein FlgC

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 141; Mature: 140

Protein sequence:

>141_residues
MPSLMNIFNVAGSAMSAQSQRLNVTASNLANADSTTGPDGKPYKAKQVVFAVNPIGGARTGSGQQVGGVQVTGVIDDPTP
MKTSYEPGNPAADANGYVQLPNVDPVQEMVNMISASRSYQANVETLNTAKQLMLKTLTIGT

Sequences:

>Translated_141_residues
MPSLMNIFNVAGSAMSAQSQRLNVTASNLANADSTTGPDGKPYKAKQVVFAVNPIGGARTGSGQQVGGVQVTGVIDDPTP
MKTSYEPGNPAADANGYVQLPNVDPVQEMVNMISASRSYQANVETLNTAKQLMLKTLTIGT
>Mature_140_residues
PSLMNIFNVAGSAMSAQSQRLNVTASNLANADSTTGPDGKPYKAKQVVFAVNPIGGARTGSGQQVGGVQVTGVIDDPTPM
KTSYEPGNPAADANGYVQLPNVDPVQEMVNMISASRSYQANVETLNTAKQLMLKTLTIGT

Specific function: Unknown

COG id: COG1558

COG function: function code N; Flagellar basal body rod protein

Gene ontology:

Cell location: Bacterial flagellum basal body [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the flagella basal body rod proteins family [H]

Homologues:

Organism=Escherichia coli, GI1787314, Length=138, Percent_Identity=68.1159420289855, Blast_Score=184, Evalue=2e-48,

Paralogues:

None

Copy number: 10-20 (rich media) [C]

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR010930
- InterPro:   IPR001444
- InterPro:   IPR019776
- InterPro:   IPR006299 [H]

Pfam domain/function: PF06429 DUF1078; PF00460 Flg_bb_rod [H]

EC number: NA

Molecular weight: Translated: 14659; Mature: 14528

Theoretical pI: Translated: 6.75; Mature: 6.75

Prosite motif: PS00588 FLAGELLA_BB_ROD

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
5.0 %Met     (Translated Protein)
5.0 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
4.3 %Met     (Mature Protein)
4.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPSLMNIFNVAGSAMSAQSQRLNVTASNLANADSTTGPDGKPYKAKQVVFAVNPIGGART
CCHHHHHHHHHCCHHCCCCCEEEEEHHHCCCCCCCCCCCCCCCCCEEEEEEECCCCCCCC
GSGQQVGGVQVTGVIDDPTPMKTSYEPGNPAADANGYVQLPNVDPVQEMVNMISASRSYQ
CCCCCCCCEEEEEEECCCCCCCCCCCCCCCCCCCCCEEECCCCCHHHHHHHHHHCCCCCC
ANVETLNTAKQLMLKTLTIGT
CCHHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure 
PSLMNIFNVAGSAMSAQSQRLNVTASNLANADSTTGPDGKPYKAKQVVFAVNPIGGART
CHHHHHHHHHCCHHCCCCCEEEEEHHHCCCCCCCCCCCCCCCCCEEEEEEECCCCCCCC
GSGQQVGGVQVTGVIDDPTPMKTSYEPGNPAADANGYVQLPNVDPVQEMVNMISASRSYQ
CCCCCCCCEEEEEEECCCCCCCCCCCCCCCCCCCCCEEECCCCCHHHHHHHHHHCCCCCC
ANVETLNTAKQLMLKTLTIGT
CCHHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA