| Definition | Burkholderia phymatum STM815 chromosome chromosome 1, complete sequence. |
|---|---|
| Accession | NC_010622 |
| Length | 3,479,187 |
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The map label for this gene is fusA1 [H]
Identifier: 186477591
GI number: 186477591
Start: 3182766
End: 3184868
Strand: Reverse
Name: fusA1 [H]
Synonym: Bphy_2843
Alternate gene names: 186477591
Gene position: 3184868-3182766 (Counterclockwise)
Preceding gene: 186477592
Following gene: 186477590
Centisome position: 91.54
GC content: 59.91
Gene sequence:
>2103_bases GTGGCTCGCAAGACTCCTATCGAGCGCTACCGCAACATCGGTATTAGCGCTCACATCGACGCCGGCAAGACGACGACGAC CGAGCGCATCCTGTTTTATACCGGCGTGAACCACAAGATCGGTGAAGTGCACGACGGCGCCGCCACCATGGACTGGATGG AGCAGGAACAGGAGCGTGGCATCACGATCACGTCCGCTGCTACCACGGCGTTCTGGAAGGGCATGGCAGGCGACCGCGCC GAGCACCGCATCAACATTATCGACACCCCGGGTCACGTCGACTTCACGATTGAAGTCGAGCGCTCGATGCGCGTGCTCGA CGGCGCATGCATGGTCTATTGCGCAGTGGGCGGCGTGCAGCCGCAGTCGGAAACGGTGTGGCGCCAGGCTAACAAGTACA AGGTGCCCCGTCTCGCGTTCATCAACAAGATGGACCGTACCGGCGCTAACTTCTTCAAGGTTTACGACCAGCTCAAGCTG CGTCTGAAGGCGAACCCGGTTCCCGTCGTTGTGCCGATCGGCGCCGAAGAGAACTTCACGGGCGTCGTCGACCTGATGAA GATGAAGGCGATCATTTGGGACGAAGCGTCCCAGGGCACCAAGTTCTCGTACGAAGACATCCCGGCAGAACTCGTCGACA CGTGCAACGAATGGCGCGAAAAGATGATCGAAGCCGCGGCTGAGTCGAGCGAAGAACTGATGAACAAGTACCTCGAGTCG GGGGAACTGAGCGAAGCGGAAATCATCAAGGGTCTGCGCGACCGTACGATCGCTTGCGAAATTCAGCCGATGCTGTGCGG TACCGCGTTCAAGAACAAGGGCGTGCAGCGCATGCTCGACGCCGTGCTCGACTTCCTGCCGTCGCCGATCGACATTCCCC CGGTCACGGGCGAACTCGAAAACGGTGAAAAGGCTGAGCGCCGCGCATCGGACGACGAGAAATTCTCGGCACTCGCATTC AAGATCATGACGGACCCGTTCGTCGGTCAACTGATCTTCTTCCGTGTGTATTCGGGCGTCGTCAATTCGGGCGACACGGT CCTGAATGCGACGAAGGACAAGAAGGAACGTCTGGGTCGTATCCTGCAGATGCACGCGAACCAGCGCGAAGAAATCAAGG AAGTGCGCGCAGGCGACATCGCTGCTGCCGTGGGCCTGAAGGAAGCGACGACGGGCGACACGCTGTGCGATCCGGCGAAC CCGATTGTTCTGGAACGCATGGTGTTCCCGGAGCCGGTGATTTCGCAGGCCGTCGAGCCGAAGACGAAGGCCGACCAGGA AAAGATGGGCATGGCGCTGAACCGCCTCGCTCAGGAAGATCCGTCGTTCCGCGTTCAAACGGACGAAGAATCTGGCCAAA CCATCATTTCGGGCATGGGCGAACTCCACCTCGAAATCCTGGTCGACCGGATGAAGCGCGAGTTCAACGTCGAGGCAACG GTCGGCAAGCCGCAAGTCGCGTATCGCGAAACGATCCGCAGCACGGCAGCGGACGTCGACGGCAAGTTCGTCAAGCAGTC GGGCGGTCGCGGCCAGTACGGTCACGCTGTCATTACGCTTGAGCCGAACGAGCAGGGCAAGGGCTACGAGTTCCTCGACG AGATCAAAGGTGGTGTCATTCCGCGTGAATACATCCCGGCAGTCGACAAGGGTATCCAGGAAACGCTGAAAGCCGGCGTG CTGGCAGGCTTCCCCGTCGTCGACGTCAAGGTTCACCTGACCTTTGGTTCGTACCACGACGTAGACTCGAACGAAAATGC GTTCCGCATGGCTGGTTCGATGGCGTTCAAGGAAGCAATGCGCAAGGCGAGCCCGGTTATCCTCGAGCCGATGATGGCCG TGGAAGTGGAAACGCCTGAAGACTACATGGGCAACGTGATGGGCGACCTGTCGGGCCGTCGCGGTATCGTCCAGGGCATG GAAGACATGGTGGGCGGCGGCAAGATCGTCCGCGCCGAAGTTCCGCTGTCGGAGATGTTTGGCTACTCGACGTCGCTGCG CTCGCTGACGCAAGGCCGCGCAACGTACACGATGGAATTCAAGCACTACGCTGAAGCGCCGCGTAACGTGTCGGAAGCGA TCATCAACGCGAAGTCGAAGTAA
Upstream 100 bases:
>100_bases GGAAAGAATTCCGGGCGGGTGCGCTTACAAAGCGCCTCGCCCGTTTGTGTTAGGGCGCGATGGACATATTTCCATCGTGT CATCCCAATAGAGGATCAAA
Downstream 100 bases:
>100_bases GACCTCGCATAGTCATTCATCGAACAACTTTTTTGAAAGAAGAGAAACATGGCTAAAGGTAAATTCGAACGGACCAAGCC GCACGTGAACGTCGGCACGA
Product: elongation factor G
Products: NA
Alternate protein names: EF-G 1 [H]
Number of amino acids: Translated: 700; Mature: 699
Protein sequence:
>700_residues MARKTPIERYRNIGISAHIDAGKTTTTERILFYTGVNHKIGEVHDGAATMDWMEQEQERGITITSAATTAFWKGMAGDRA EHRINIIDTPGHVDFTIEVERSMRVLDGACMVYCAVGGVQPQSETVWRQANKYKVPRLAFINKMDRTGANFFKVYDQLKL RLKANPVPVVVPIGAEENFTGVVDLMKMKAIIWDEASQGTKFSYEDIPAELVDTCNEWREKMIEAAAESSEELMNKYLES GELSEAEIIKGLRDRTIACEIQPMLCGTAFKNKGVQRMLDAVLDFLPSPIDIPPVTGELENGEKAERRASDDEKFSALAF KIMTDPFVGQLIFFRVYSGVVNSGDTVLNATKDKKERLGRILQMHANQREEIKEVRAGDIAAAVGLKEATTGDTLCDPAN PIVLERMVFPEPVISQAVEPKTKADQEKMGMALNRLAQEDPSFRVQTDEESGQTIISGMGELHLEILVDRMKREFNVEAT VGKPQVAYRETIRSTAADVDGKFVKQSGGRGQYGHAVITLEPNEQGKGYEFLDEIKGGVIPREYIPAVDKGIQETLKAGV LAGFPVVDVKVHLTFGSYHDVDSNENAFRMAGSMAFKEAMRKASPVILEPMMAVEVETPEDYMGNVMGDLSGRRGIVQGM EDMVGGGKIVRAEVPLSEMFGYSTSLRSLTQGRATYTMEFKHYAEAPRNVSEAIINAKSK
Sequences:
>Translated_700_residues MARKTPIERYRNIGISAHIDAGKTTTTERILFYTGVNHKIGEVHDGAATMDWMEQEQERGITITSAATTAFWKGMAGDRA EHRINIIDTPGHVDFTIEVERSMRVLDGACMVYCAVGGVQPQSETVWRQANKYKVPRLAFINKMDRTGANFFKVYDQLKL RLKANPVPVVVPIGAEENFTGVVDLMKMKAIIWDEASQGTKFSYEDIPAELVDTCNEWREKMIEAAAESSEELMNKYLES GELSEAEIIKGLRDRTIACEIQPMLCGTAFKNKGVQRMLDAVLDFLPSPIDIPPVTGELENGEKAERRASDDEKFSALAF KIMTDPFVGQLIFFRVYSGVVNSGDTVLNATKDKKERLGRILQMHANQREEIKEVRAGDIAAAVGLKEATTGDTLCDPAN PIVLERMVFPEPVISQAVEPKTKADQEKMGMALNRLAQEDPSFRVQTDEESGQTIISGMGELHLEILVDRMKREFNVEAT VGKPQVAYRETIRSTAADVDGKFVKQSGGRGQYGHAVITLEPNEQGKGYEFLDEIKGGVIPREYIPAVDKGIQETLKAGV LAGFPVVDVKVHLTFGSYHDVDSNENAFRMAGSMAFKEAMRKASPVILEPMMAVEVETPEDYMGNVMGDLSGRRGIVQGM EDMVGGGKIVRAEVPLSEMFGYSTSLRSLTQGRATYTMEFKHYAEAPRNVSEAIINAKSK >Mature_699_residues ARKTPIERYRNIGISAHIDAGKTTTTERILFYTGVNHKIGEVHDGAATMDWMEQEQERGITITSAATTAFWKGMAGDRAE HRINIIDTPGHVDFTIEVERSMRVLDGACMVYCAVGGVQPQSETVWRQANKYKVPRLAFINKMDRTGANFFKVYDQLKLR LKANPVPVVVPIGAEENFTGVVDLMKMKAIIWDEASQGTKFSYEDIPAELVDTCNEWREKMIEAAAESSEELMNKYLESG ELSEAEIIKGLRDRTIACEIQPMLCGTAFKNKGVQRMLDAVLDFLPSPIDIPPVTGELENGEKAERRASDDEKFSALAFK IMTDPFVGQLIFFRVYSGVVNSGDTVLNATKDKKERLGRILQMHANQREEIKEVRAGDIAAAVGLKEATTGDTLCDPANP IVLERMVFPEPVISQAVEPKTKADQEKMGMALNRLAQEDPSFRVQTDEESGQTIISGMGELHLEILVDRMKREFNVEATV GKPQVAYRETIRSTAADVDGKFVKQSGGRGQYGHAVITLEPNEQGKGYEFLDEIKGGVIPREYIPAVDKGIQETLKAGVL AGFPVVDVKVHLTFGSYHDVDSNENAFRMAGSMAFKEAMRKASPVILEPMMAVEVETPEDYMGNVMGDLSGRRGIVQGME DMVGGGKIVRAEVPLSEMFGYSTSLRSLTQGRATYTMEFKHYAEAPRNVSEAIINAKSK
Specific function: Catalyzes the GTP-dependent ribosomal translocation step during translation elongation. During this step, the ribosome changes from the pre-translocational (PRE) to the post- translocational (POST) state as the newly formed A-site-bound peptidyl-tRNA and
COG id: COG0480
COG function: function code J; Translation elongation factors (GTPases)
Gene ontology:
Cell location: Cytoplasm [H]
Metaboloic importance: Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the GTP-binding elongation factor family. EF-G/EF-2 subfamily [H]
Homologues:
Organism=Homo sapiens, GI18390331, Length=704, Percent_Identity=44.7443181818182, Blast_Score=557, Evalue=1e-158, Organism=Homo sapiens, GI19923640, Length=734, Percent_Identity=38.283378746594, Blast_Score=458, Evalue=1e-129, Organism=Homo sapiens, GI25306287, Length=734, Percent_Identity=36.2397820163488, Blast_Score=412, Evalue=1e-115, Organism=Homo sapiens, GI25306283, Length=456, Percent_Identity=41.0087719298246, Blast_Score=307, Evalue=3e-83, Organism=Homo sapiens, GI4503483, Length=427, Percent_Identity=29.03981264637, Blast_Score=113, Evalue=8e-25, Organism=Homo sapiens, GI157426893, Length=154, Percent_Identity=33.7662337662338, Blast_Score=96, Evalue=8e-20, Organism=Homo sapiens, GI94966754, Length=136, Percent_Identity=40.4411764705882, Blast_Score=95, Evalue=2e-19, Organism=Homo sapiens, GI310132016, Length=120, Percent_Identity=40, Blast_Score=80, Evalue=7e-15, Organism=Homo sapiens, GI310110807, Length=120, Percent_Identity=40, Blast_Score=80, Evalue=7e-15, Organism=Homo sapiens, GI310123363, Length=120, Percent_Identity=40, Blast_Score=80, Evalue=7e-15, Organism=Escherichia coli, GI1789738, Length=705, Percent_Identity=75.0354609929078, Blast_Score=1085, Evalue=0.0, Organism=Escherichia coli, GI1790835, Length=493, Percent_Identity=27.3833671399594, Blast_Score=153, Evalue=4e-38, Organism=Escherichia coli, GI48994988, Length=182, Percent_Identity=37.9120879120879, Blast_Score=107, Evalue=3e-24, Organism=Escherichia coli, GI1788922, Length=149, Percent_Identity=36.241610738255, Blast_Score=89, Evalue=8e-19, Organism=Caenorhabditis elegans, GI17533571, Length=692, Percent_Identity=41.6184971098266, Blast_Score=506, Evalue=1e-143, Organism=Caenorhabditis elegans, GI17556745, Length=721, Percent_Identity=30.6518723994452, Blast_Score=311, Evalue=1e-84, Organism=Caenorhabditis elegans, GI17506493, Length=503, Percent_Identity=28.4294234592445, Blast_Score=117, Evalue=3e-26, Organism=Caenorhabditis elegans, GI17557151, Length=163, Percent_Identity=37.4233128834356, Blast_Score=96, Evalue=6e-20, Organism=Caenorhabditis elegans, GI71988819, Length=146, Percent_Identity=32.8767123287671, Blast_Score=75, Evalue=8e-14, Organism=Caenorhabditis elegans, GI71988811, Length=147, Percent_Identity=31.9727891156463, Blast_Score=75, Evalue=1e-13, Organism=Saccharomyces cerevisiae, GI6323098, Length=694, Percent_Identity=42.9394812680115, Blast_Score=547, Evalue=1e-156, Organism=Saccharomyces cerevisiae, GI6322359, Length=803, Percent_Identity=32.0049813200498, Blast_Score=389, Evalue=1e-108, Organism=Saccharomyces cerevisiae, GI6324707, Length=827, Percent_Identity=26.360338573156, Blast_Score=164, Evalue=4e-41, Organism=Saccharomyces cerevisiae, GI6320593, Length=827, Percent_Identity=26.360338573156, Blast_Score=164, Evalue=4e-41, Organism=Saccharomyces cerevisiae, GI6323320, Length=155, Percent_Identity=34.8387096774194, Blast_Score=94, Evalue=8e-20, Organism=Saccharomyces cerevisiae, GI6324166, Length=144, Percent_Identity=36.1111111111111, Blast_Score=82, Evalue=4e-16, Organism=Drosophila melanogaster, GI24582462, Length=711, Percent_Identity=44.8663853727145, Blast_Score=579, Evalue=1e-165, Organism=Drosophila melanogaster, GI221458488, Length=717, Percent_Identity=31.7991631799163, Blast_Score=349, Evalue=4e-96, Organism=Drosophila melanogaster, GI24585711, Length=431, Percent_Identity=28.3062645011601, Blast_Score=115, Evalue=1e-25, Organism=Drosophila melanogaster, GI24585713, Length=431, Percent_Identity=28.3062645011601, Blast_Score=115, Evalue=1e-25, Organism=Drosophila melanogaster, GI24585709, Length=431, Percent_Identity=28.3062645011601, Blast_Score=115, Evalue=1e-25, Organism=Drosophila melanogaster, GI78706572, Length=161, Percent_Identity=36.0248447204969, Blast_Score=101, Evalue=1e-21, Organism=Drosophila melanogaster, GI28574573, Length=143, Percent_Identity=37.7622377622378, Blast_Score=87, Evalue=5e-17,
Paralogues:
None
Copy number: 1080 Molecules/Cell In: Growth Phase, Minimal Media (Based on E. coli). 2520 Molecules/Cell In: Growth-Phase, Minimal-Media (Based on E. coli). 20 Molecules/Cell In: Stationary Phase, Rich Media (Based on E. coli). 7984 Molecules/Cell In: Growth Phase, Gl
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR009022 - InterPro: IPR000795 - InterPro: IPR020568 - InterPro: IPR014721 - InterPro: IPR005225 - InterPro: IPR004540 - InterPro: IPR000640 - InterPro: IPR005517 - InterPro: IPR004161 - InterPro: IPR009000 [H]
Pfam domain/function: PF00679 EFG_C; PF03764 EFG_IV; PF00009 GTP_EFTU; PF03144 GTP_EFTU_D2 [H]
EC number: NA
Molecular weight: Translated: 77513; Mature: 77382
Theoretical pI: Translated: 5.04; Mature: 5.04
Prosite motif: PS00301 EFACTOR_GTP
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.9 %Cys (Translated Protein) 4.4 %Met (Translated Protein) 5.3 %Cys+Met (Translated Protein) 0.9 %Cys (Mature Protein) 4.3 %Met (Mature Protein) 5.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MARKTPIERYRNIGISAHIDAGKTTTTERILFYTGVNHKIGEVHDGAATMDWMEQEQERG CCCCCHHHHHHCCCCEEEECCCCCCCCCEEEEEECCCCCCCCCCCCCHHHHHHHHHHHCC ITITSAATTAFWKGMAGDRAEHRINIIDTPGHVDFTIEVERSMRVLDGACMVYCAVGGVQ EEEEEHHHHHHHHCCCCCCCCCEEEEEECCCCEEEEEEECHHHHHHHHHHEEHEECCCCC PQSETVWRQANKYKVPRLAFINKMDRTGANFFKVYDQLKLRLKANPVPVVVPIGAEENFT CCHHHHHHHHCCCCCCHHHHHHHHCCCCHHHHHHHHHHHHEEECCCCEEEEECCCCCCCH GVVDLMKMKAIIWDEASQGTKFSYEDIPAELVDTCNEWREKMIEAAAESSEELMNKYLES HHHHHHHHHHHHCCCCCCCCCCCHHCCCHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHC GELSEAEIIKGLRDRTIACEIQPMLCGTAFKNKGVQRMLDAVLDFLPSPIDIPPVTGELE CCCCHHHHHHHHHCCEEEEEEEHHHHCHHHHCCCHHHHHHHHHHHCCCCCCCCCCCCCCC NGEKAERRASDDEKFSALAFKIMTDPFVGQLIFFRVYSGVVNSGDTVLNATKDKKERLGR CCCHHHHCCCCCHHHHHHHHHHHCCHHHHHHHHHHHHHHHCCCCCCEEECCHHHHHHHHH ILQMHANQREEIKEVRAGDIAAAVGLKEATTGDTLCDPANPIVLERMVFPEPVISQAVEP HHHHHCCCHHHHHHHHCCCHHHHHCCCCCCCCCCCCCCCCCHHHHHHCCCCHHHHHHCCC KTKADQEKMGMALNRLAQEDPSFRVQTDEESGQTIISGMGELHLEILVDRMKREFNVEAT CCCCCHHHHHHHHHHHHHCCCCEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCEEE VGKPQVAYRETIRSTAADVDGKFVKQSGGRGQYGHAVITLEPNEQGKGYEFLDEIKGGVI CCCCHHHHHHHHHHHHHCCCCHHHHCCCCCCCCCCEEEEECCCCCCCCHHHHHHHCCCCC PREYIPAVDKGIQETLKAGVLAGFPVVDVKVHLTFGSYHDVDSNENAFRMAGSMAFKEAM CHHHHHHHHHHHHHHHHHHHHCCCCEEEEEEEEEECCCCCCCCCCCHHHHHHHHHHHHHH RKASPVILEPMMAVEVETPEDYMGNVMGDLSGRRGIVQGMEDMVGGGKIVRAEVPLSEMF HHCCCEEECCEEEEEECCCHHHHHHHHHHCCCCCHHHHHHHHHCCCCEEEEEECCHHHHH GYSTSLRSLTQGRATYTMEFKHYAEAPRNVSEAIINAKSK CCHHHHHHHHCCCCEEEEEHHHHHCCCCCHHHHHHCCCCC >Mature Secondary Structure ARKTPIERYRNIGISAHIDAGKTTTTERILFYTGVNHKIGEVHDGAATMDWMEQEQERG CCCCHHHHHHCCCCEEEECCCCCCCCCEEEEEECCCCCCCCCCCCCHHHHHHHHHHHCC ITITSAATTAFWKGMAGDRAEHRINIIDTPGHVDFTIEVERSMRVLDGACMVYCAVGGVQ EEEEEHHHHHHHHCCCCCCCCCEEEEEECCCCEEEEEEECHHHHHHHHHHEEHEECCCCC PQSETVWRQANKYKVPRLAFINKMDRTGANFFKVYDQLKLRLKANPVPVVVPIGAEENFT CCHHHHHHHHCCCCCCHHHHHHHHCCCCHHHHHHHHHHHHEEECCCCEEEEECCCCCCCH GVVDLMKMKAIIWDEASQGTKFSYEDIPAELVDTCNEWREKMIEAAAESSEELMNKYLES HHHHHHHHHHHHCCCCCCCCCCCHHCCCHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHC GELSEAEIIKGLRDRTIACEIQPMLCGTAFKNKGVQRMLDAVLDFLPSPIDIPPVTGELE CCCCHHHHHHHHHCCEEEEEEEHHHHCHHHHCCCHHHHHHHHHHHCCCCCCCCCCCCCCC NGEKAERRASDDEKFSALAFKIMTDPFVGQLIFFRVYSGVVNSGDTVLNATKDKKERLGR CCCHHHHCCCCCHHHHHHHHHHHCCHHHHHHHHHHHHHHHCCCCCCEEECCHHHHHHHHH ILQMHANQREEIKEVRAGDIAAAVGLKEATTGDTLCDPANPIVLERMVFPEPVISQAVEP HHHHHCCCHHHHHHHHCCCHHHHHCCCCCCCCCCCCCCCCCHHHHHHCCCCHHHHHHCCC KTKADQEKMGMALNRLAQEDPSFRVQTDEESGQTIISGMGELHLEILVDRMKREFNVEAT CCCCCHHHHHHHHHHHHHCCCCEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCEEE VGKPQVAYRETIRSTAADVDGKFVKQSGGRGQYGHAVITLEPNEQGKGYEFLDEIKGGVI CCCCHHHHHHHHHHHHHCCCCHHHHCCCCCCCCCCEEEEECCCCCCCCHHHHHHHCCCCC PREYIPAVDKGIQETLKAGVLAGFPVVDVKVHLTFGSYHDVDSNENAFRMAGSMAFKEAM CHHHHHHHHHHHHHHHHHHHHCCCCEEEEEEEEEECCCCCCCCCCCHHHHHHHHHHHHHH RKASPVILEPMMAVEVETPEDYMGNVMGDLSGRRGIVQGMEDMVGGGKIVRAEVPLSEMF HHCCCEEECCEEEEEECCCHHHHHHHHHHCCCCCHHHHHHHHHCCCCEEEEEECCHHHHH GYSTSLRSLTQGRATYTMEFKHYAEAPRNVSEAIINAKSK CCHHHHHHHHCCCCEEEEEHHHHHCCCCCHHHHHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA