| Definition | Burkholderia phymatum STM815 chromosome chromosome 1, complete sequence. |
|---|---|
| Accession | NC_010622 |
| Length | 3,479,187 |
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The map label for this gene is 186477546
Identifier: 186477546
GI number: 186477546
Start: 3150266
End: 3151225
Strand: Reverse
Name: 186477546
Synonym: Bphy_2798
Alternate gene names: NA
Gene position: 3151225-3150266 (Counterclockwise)
Preceding gene: 186477548
Following gene: 186477545
Centisome position: 90.57
GC content: 65.31
Gene sequence:
>960_bases ATGGCGTTGAAAGACTCGTTACGAATGGCGATGCGGCGTCAGGCAGTCGGCATCGATGTTGGCGCACAAGCGGTGAGGCT CGTTGTGCTGAGTGGCAGCGGGCGAAAGACGGGACCTGCGCGGATCGAATGCGTCGCGCTGGAGCCGCTTGCGCCGGGCG CGATGGCGGGCGCGGAAATTGTGGACCGGCAAGCAGTGGCGCGCGCCGTGTGCGCGGCGTTCGGCAACGTGCCGCCACAG TGCGCGTCGGCGGCATTGCGTTGCGCGATGGCGATACCCGGGGCCGCAACCTTCACGGCTCATCTGCCTGCAAGTCACGT GAACGGTCCGCCGCGTCCGTCCGCGTCGCTCGAACCTGCCGTGTTGATGGAGGCCGAGCGAATCGCGGGCATTGAGCGCC ATGCATTGGCCGTCGACTGGTACGTCGAGGACTCGCCGCCGCATCCCGGCGCCGTGTCGATCGCTGCGACTGCGCGCGAG CATCTCGAAGCGCGCATCGAATGCGCTGCGATGGCCGGTGTCACGCTGACCACAGTCGACGTCGAACCGCATGTCGCGTT GCGCGCGCTGCGCTACGCAGCGAGGTTCGAACTCGAACTGCACGAACCTTATGCCGCGATCTGGATAGGCGGCGACGGCG TGTACGGCTGGCGTATAGAAGACGAAACCATCGCGGAAGAAATCCGCTATCCGTCGCCCGAGTATTCGTGCGTCGCCGAC GCATTGCGCGATCTCGCCGAAAACAATCTGAACGTATGCGCGCTGGTGGGCGGGGAGATCGACCTGCTCGAAGGGGTGTG CTTCTCGCTCGCCGACATTGGGGACGTGCTGGGCTGCTCCGTGCTGCCGTTCGACGGTTCGTCGCTGAGCGACGGCAACG TCATTCCGCATGCAGAACTGATGCACGACCCTGCGTTCGCGGTCGCATTCGGCTTGGCACTGCGTGGCATCGCGCAATGA
Upstream 100 bases:
>100_bases AATGTCGCTGTCGTTTCGCGCTACGCAGAATCCTTTCCGTTGCCCGCGTCGGATGAGTGTTGCGGGCCTTCGGTTTCCGT TGGCATGCAAGGAGAAAGAG
Downstream 100 bases:
>100_bases CGGCGGCGCGAAGGAGCCTGGCGGGCTTCAATCTGTTGCCGCACCGGCAGCGCGATGCGCGGCTCGCACGCCGGCGCCGC TATCTCGAATGGGTGAGCGC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 319; Mature: 318
Protein sequence:
>319_residues MALKDSLRMAMRRQAVGIDVGAQAVRLVVLSGSGRKTGPARIECVALEPLAPGAMAGAEIVDRQAVARAVCAAFGNVPPQ CASAALRCAMAIPGAATFTAHLPASHVNGPPRPSASLEPAVLMEAERIAGIERHALAVDWYVEDSPPHPGAVSIAATARE HLEARIECAAMAGVTLTTVDVEPHVALRALRYAARFELELHEPYAAIWIGGDGVYGWRIEDETIAEEIRYPSPEYSCVAD ALRDLAENNLNVCALVGGEIDLLEGVCFSLADIGDVLGCSVLPFDGSSLSDGNVIPHAELMHDPAFAVAFGLALRGIAQ
Sequences:
>Translated_319_residues MALKDSLRMAMRRQAVGIDVGAQAVRLVVLSGSGRKTGPARIECVALEPLAPGAMAGAEIVDRQAVARAVCAAFGNVPPQ CASAALRCAMAIPGAATFTAHLPASHVNGPPRPSASLEPAVLMEAERIAGIERHALAVDWYVEDSPPHPGAVSIAATARE HLEARIECAAMAGVTLTTVDVEPHVALRALRYAARFELELHEPYAAIWIGGDGVYGWRIEDETIAEEIRYPSPEYSCVAD ALRDLAENNLNVCALVGGEIDLLEGVCFSLADIGDVLGCSVLPFDGSSLSDGNVIPHAELMHDPAFAVAFGLALRGIAQ >Mature_318_residues ALKDSLRMAMRRQAVGIDVGAQAVRLVVLSGSGRKTGPARIECVALEPLAPGAMAGAEIVDRQAVARAVCAAFGNVPPQC ASAALRCAMAIPGAATFTAHLPASHVNGPPRPSASLEPAVLMEAERIAGIERHALAVDWYVEDSPPHPGAVSIAATAREH LEARIECAAMAGVTLTTVDVEPHVALRALRYAARFELELHEPYAAIWIGGDGVYGWRIEDETIAEEIRYPSPEYSCVADA LRDLAENNLNVCALVGGEIDLLEGVCFSLADIGDVLGCSVLPFDGSSLSDGNVIPHAELMHDPAFAVAFGLALRGIAQ
Specific function: Unknown
COG id: COG4972
COG function: function code NU; Tfp pilus assembly protein, ATPase PilM
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 33471; Mature: 33339
Theoretical pI: Translated: 4.63; Mature: 4.63
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.8 %Cys (Translated Protein) 2.5 %Met (Translated Protein) 5.3 %Cys+Met (Translated Protein) 2.8 %Cys (Mature Protein) 2.2 %Met (Mature Protein) 5.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MALKDSLRMAMRRQAVGIDVGAQAVRLVVLSGSGRKTGPARIECVALEPLAPGAMAGAEI CCCHHHHHHHHHHHHCCCCCCCCEEEEEEEECCCCCCCCCEEEEEEECCCCCCHHHHHHH VDRQAVARAVCAAFGNVPPQCASAALRCAMAIPGAATFTAHLPASHVNGPPRPSASLEPA HHHHHHHHHHHHHHCCCCHHHHHHHHHHHHCCCCCCEEEEECCHHHCCCCCCCCCCCCHH VLMEAERIAGIERHALAVDWYVEDSPPHPGAVSIAATAREHLEARIECAAMAGVTLTTVD HHHHHHHHCCCHHHEEEEEEEEECCCCCCCEEEHHHHHHHHHHHHHHHHEECCEEEEEEE VEPHVALRALRYAARFELELHEPYAAIWIGGDGVYGWRIEDETIAEEIRYPSPEYSCVAD CCHHHHHHHHHHHHHEEEEEECCEEEEEECCCCEEEEEECHHHHHHHHCCCCCCHHHHHH ALRDLAENNLNVCALVGGEIDLLEGVCFSLADIGDVLGCSVLPFDGSSLSDGNVIPHAEL HHHHHHHCCCCEEEEECCCHHHHHHHHHHHHHHHHHHCCEEECCCCCCCCCCCCCCCHHH MHDPAFAVAFGLALRGIAQ HCCHHHHHHHHHHHHHCCC >Mature Secondary Structure ALKDSLRMAMRRQAVGIDVGAQAVRLVVLSGSGRKTGPARIECVALEPLAPGAMAGAEI CCHHHHHHHHHHHHCCCCCCCCEEEEEEEECCCCCCCCCEEEEEEECCCCCCHHHHHHH VDRQAVARAVCAAFGNVPPQCASAALRCAMAIPGAATFTAHLPASHVNGPPRPSASLEPA HHHHHHHHHHHHHHCCCCHHHHHHHHHHHHCCCCCCEEEEECCHHHCCCCCCCCCCCCHH VLMEAERIAGIERHALAVDWYVEDSPPHPGAVSIAATAREHLEARIECAAMAGVTLTTVD HHHHHHHHCCCHHHEEEEEEEEECCCCCCCEEEHHHHHHHHHHHHHHHHEECCEEEEEEE VEPHVALRALRYAARFELELHEPYAAIWIGGDGVYGWRIEDETIAEEIRYPSPEYSCVAD CCHHHHHHHHHHHHHEEEEEECCEEEEEECCCCEEEEEECHHHHHHHHCCCCCCHHHHHH ALRDLAENNLNVCALVGGEIDLLEGVCFSLADIGDVLGCSVLPFDGSSLSDGNVIPHAEL HHHHHHHCCCCEEEEECCCHHHHHHHHHHHHHHHHHHCCEEECCCCCCCCCCCCCCCHHH MHDPAFAVAFGLALRGIAQ HCCHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA