Definition Burkholderia phymatum STM815 chromosome chromosome 1, complete sequence.
Accession NC_010622
Length 3,479,187

Click here to switch to the map view.

The map label for this gene is 186477545

Identifier: 186477545

GI number: 186477545

Start: 3149637

End: 3150269

Strand: Reverse

Name: 186477545

Synonym: Bphy_2797

Alternate gene names: NA

Gene position: 3150269-3149637 (Counterclockwise)

Preceding gene: 186477546

Following gene: 186477544

Centisome position: 90.55

GC content: 66.03

Gene sequence:

>633_bases
ATGACGGCGGCGCGAAGGAGCCTGGCGGGCTTCAATCTGTTGCCGCACCGGCAGCGCGATGCGCGGCTCGCACGCCGGCG
CCGCTATCTCGAATGGGTGAGCGCCGCGCTGTGCGCTTGTGTTGCCGTGGCGCTGCTGATGACGTGGCAGGCGTTCGAAC
GCTCACGGTTGGACCGCGAGCGTTCGGCCCTCGAGCAAAAATTTGCCGTACTTGCGTCGCCACTTGCCGAGCATGCGCGG
CTGACGGGCGAAGCCCGCAACGAGCGCCTGCAGAACGAGCGCGCGGCGGCGCTTTCCGAGCCGCTCGTTCATCTGCTCGA
TCTCCTCGATGCATTGAGCGAGGAGTCGTCCGACTCGGTCGTCGTGAAGCAGTTGCGACACCGCGAGCGCGACACGGAGT
TGCTCGCGGCGTCCGCGGATCACGCGGCGTCGGCGGCGTGGCTTAACCGACTCGCCGCATTGAAAGGCGTGAAGGACTCG
GATTTGAGCGATGTGCATCGTGCGACCAATGTGACGCACGCGACGGATCCGGCGACGGCGCTTGAGATCACCGCGCACCT
GAAATGGGACGGTGCGCCGGCGAAGTCCAGAGCGCCGCGAGCGTCATCACCGAACACGAGGGGTAACAAATGA

Upstream 100 bases:

>100_bases
GTTCGTCGCTGAGCGACGGCAACGTCATTCCGCATGCAGAACTGATGCACGACCCTGCGTTCGCGGTCGCATTCGGCTTG
GCACTGCGTGGCATCGCGCA

Downstream 100 bases:

>100_bases
AGATGACGATTGCTGGGCGCTTCGGCAGGCCGGCAGCGCGCGAGCGTGTTGGACATGCGCTCGTCGAGCGCCTGCGCGTG
CCGCTCGAAGCATGGAGTGT

Product: fimbrial assembly family protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 210; Mature: 209

Protein sequence:

>210_residues
MTAARRSLAGFNLLPHRQRDARLARRRRYLEWVSAALCACVAVALLMTWQAFERSRLDRERSALEQKFAVLASPLAEHAR
LTGEARNERLQNERAAALSEPLVHLLDLLDALSEESSDSVVVKQLRHRERDTELLAASADHAASAAWLNRLAALKGVKDS
DLSDVHRATNVTHATDPATALEITAHLKWDGAPAKSRAPRASSPNTRGNK

Sequences:

>Translated_210_residues
MTAARRSLAGFNLLPHRQRDARLARRRRYLEWVSAALCACVAVALLMTWQAFERSRLDRERSALEQKFAVLASPLAEHAR
LTGEARNERLQNERAAALSEPLVHLLDLLDALSEESSDSVVVKQLRHRERDTELLAASADHAASAAWLNRLAALKGVKDS
DLSDVHRATNVTHATDPATALEITAHLKWDGAPAKSRAPRASSPNTRGNK
>Mature_209_residues
TAARRSLAGFNLLPHRQRDARLARRRRYLEWVSAALCACVAVALLMTWQAFERSRLDRERSALEQKFAVLASPLAEHARL
TGEARNERLQNERAAALSEPLVHLLDLLDALSEESSDSVVVKQLRHRERDTELLAASADHAASAAWLNRLAALKGVKDSD
LSDVHRATNVTHATDPATALEITAHLKWDGAPAKSRAPRASSPNTRGNK

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 23190; Mature: 23059

Theoretical pI: Translated: 10.44; Mature: 10.44

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.0 %Cys     (Translated Protein)
1.0 %Met     (Translated Protein)
1.9 %Cys+Met (Translated Protein)
1.0 %Cys     (Mature Protein)
0.5 %Met     (Mature Protein)
1.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTAARRSLAGFNLLPHRQRDARLARRRRYLEWVSAALCACVAVALLMTWQAFERSRLDRE
CCCHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
RSALEQKFAVLASPLAEHARLTGEARNERLQNERAAALSEPLVHLLDLLDALSEESSDSV
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHH
VVKQLRHRERDTELLAASADHAASAAWLNRLAALKGVKDSDLSDVHRATNVTHATDPATA
HHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHCCCCCCCCHHH
LEITAHLKWDGAPAKSRAPRASSPNTRGNK
HHHEEEEEECCCCCCCCCCCCCCCCCCCCC
>Mature Secondary Structure 
TAARRSLAGFNLLPHRQRDARLARRRRYLEWVSAALCACVAVALLMTWQAFERSRLDRE
CCHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
RSALEQKFAVLASPLAEHARLTGEARNERLQNERAAALSEPLVHLLDLLDALSEESSDSV
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHH
VVKQLRHRERDTELLAASADHAASAAWLNRLAALKGVKDSDLSDVHRATNVTHATDPATA
HHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHCCCCCCCCHHH
LEITAHLKWDGAPAKSRAPRASSPNTRGNK
HHHEEEEEECCCCCCCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA