| Definition | Burkholderia phymatum STM815 chromosome chromosome 1, complete sequence. |
|---|---|
| Accession | NC_010622 |
| Length | 3,479,187 |
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The map label for this gene is 186477545
Identifier: 186477545
GI number: 186477545
Start: 3149637
End: 3150269
Strand: Reverse
Name: 186477545
Synonym: Bphy_2797
Alternate gene names: NA
Gene position: 3150269-3149637 (Counterclockwise)
Preceding gene: 186477546
Following gene: 186477544
Centisome position: 90.55
GC content: 66.03
Gene sequence:
>633_bases ATGACGGCGGCGCGAAGGAGCCTGGCGGGCTTCAATCTGTTGCCGCACCGGCAGCGCGATGCGCGGCTCGCACGCCGGCG CCGCTATCTCGAATGGGTGAGCGCCGCGCTGTGCGCTTGTGTTGCCGTGGCGCTGCTGATGACGTGGCAGGCGTTCGAAC GCTCACGGTTGGACCGCGAGCGTTCGGCCCTCGAGCAAAAATTTGCCGTACTTGCGTCGCCACTTGCCGAGCATGCGCGG CTGACGGGCGAAGCCCGCAACGAGCGCCTGCAGAACGAGCGCGCGGCGGCGCTTTCCGAGCCGCTCGTTCATCTGCTCGA TCTCCTCGATGCATTGAGCGAGGAGTCGTCCGACTCGGTCGTCGTGAAGCAGTTGCGACACCGCGAGCGCGACACGGAGT TGCTCGCGGCGTCCGCGGATCACGCGGCGTCGGCGGCGTGGCTTAACCGACTCGCCGCATTGAAAGGCGTGAAGGACTCG GATTTGAGCGATGTGCATCGTGCGACCAATGTGACGCACGCGACGGATCCGGCGACGGCGCTTGAGATCACCGCGCACCT GAAATGGGACGGTGCGCCGGCGAAGTCCAGAGCGCCGCGAGCGTCATCACCGAACACGAGGGGTAACAAATGA
Upstream 100 bases:
>100_bases GTTCGTCGCTGAGCGACGGCAACGTCATTCCGCATGCAGAACTGATGCACGACCCTGCGTTCGCGGTCGCATTCGGCTTG GCACTGCGTGGCATCGCGCA
Downstream 100 bases:
>100_bases AGATGACGATTGCTGGGCGCTTCGGCAGGCCGGCAGCGCGCGAGCGTGTTGGACATGCGCTCGTCGAGCGCCTGCGCGTG CCGCTCGAAGCATGGAGTGT
Product: fimbrial assembly family protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 210; Mature: 209
Protein sequence:
>210_residues MTAARRSLAGFNLLPHRQRDARLARRRRYLEWVSAALCACVAVALLMTWQAFERSRLDRERSALEQKFAVLASPLAEHAR LTGEARNERLQNERAAALSEPLVHLLDLLDALSEESSDSVVVKQLRHRERDTELLAASADHAASAAWLNRLAALKGVKDS DLSDVHRATNVTHATDPATALEITAHLKWDGAPAKSRAPRASSPNTRGNK
Sequences:
>Translated_210_residues MTAARRSLAGFNLLPHRQRDARLARRRRYLEWVSAALCACVAVALLMTWQAFERSRLDRERSALEQKFAVLASPLAEHAR LTGEARNERLQNERAAALSEPLVHLLDLLDALSEESSDSVVVKQLRHRERDTELLAASADHAASAAWLNRLAALKGVKDS DLSDVHRATNVTHATDPATALEITAHLKWDGAPAKSRAPRASSPNTRGNK >Mature_209_residues TAARRSLAGFNLLPHRQRDARLARRRRYLEWVSAALCACVAVALLMTWQAFERSRLDRERSALEQKFAVLASPLAEHARL TGEARNERLQNERAAALSEPLVHLLDLLDALSEESSDSVVVKQLRHRERDTELLAASADHAASAAWLNRLAALKGVKDSD LSDVHRATNVTHATDPATALEITAHLKWDGAPAKSRAPRASSPNTRGNK
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 23190; Mature: 23059
Theoretical pI: Translated: 10.44; Mature: 10.44
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.0 %Cys (Translated Protein) 1.0 %Met (Translated Protein) 1.9 %Cys+Met (Translated Protein) 1.0 %Cys (Mature Protein) 0.5 %Met (Mature Protein) 1.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTAARRSLAGFNLLPHRQRDARLARRRRYLEWVSAALCACVAVALLMTWQAFERSRLDRE CCCHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH RSALEQKFAVLASPLAEHARLTGEARNERLQNERAAALSEPLVHLLDLLDALSEESSDSV HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHH VVKQLRHRERDTELLAASADHAASAAWLNRLAALKGVKDSDLSDVHRATNVTHATDPATA HHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHCCCCCCCCHHH LEITAHLKWDGAPAKSRAPRASSPNTRGNK HHHEEEEEECCCCCCCCCCCCCCCCCCCCC >Mature Secondary Structure TAARRSLAGFNLLPHRQRDARLARRRRYLEWVSAALCACVAVALLMTWQAFERSRLDRE CCHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH RSALEQKFAVLASPLAEHARLTGEARNERLQNERAAALSEPLVHLLDLLDALSEESSDSV HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHH VVKQLRHRERDTELLAASADHAASAAWLNRLAALKGVKDSDLSDVHRATNVTHATDPATA HHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHCCCCCCCCHHH LEITAHLKWDGAPAKSRAPRASSPNTRGNK HHHEEEEEECCCCCCCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA