| Definition | Burkholderia phymatum STM815 chromosome chromosome 1, complete sequence. |
|---|---|
| Accession | NC_010622 |
| Length | 3,479,187 |
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The map label for this gene is 186477544
Identifier: 186477544
GI number: 186477544
Start: 3148726
End: 3149640
Strand: Reverse
Name: 186477544
Synonym: Bphy_2796
Alternate gene names: NA
Gene position: 3149640-3148726 (Counterclockwise)
Preceding gene: 186477545
Following gene: 186477543
Centisome position: 90.53
GC content: 63.83
Gene sequence:
>915_bases ATGAAGATGACGATTGCTGGGCGCTTCGGCAGGCCGGCAGCGCGCGAGCGTGTTGGACATGCGCTCGTCGAGCGCCTGCG CGTGCCGCTCGAAGCATGGAGTGTGCGGCGACGCGGGTTAGTCGCTTCGTGCATCGCTGTGACGGTATTCATGCTCGGCG CCAACGCATGGATTGCGACGGACTCGAGCGGCGTGCAGGTAAGCCGCGACGCGCTGTCTGCAGCGCAACGCAGGTTGAGC GAAGTCGAAGCGGCCGTCGCGCAATTGCCGGATCTGCGCACGGCGACGAGCGTCACGCGCATGCCAGCCAACTGGACTTC CGCCGACGACATCCGCGTGATCTCGCAACTCGCGTCGCGCAACGACGTGACGCTGCTGTCGATCGAACCGGCTGCCGTCA CGGGAAGCGGCATCGACGCGATGCGCCCGCTGCGTGTGACGGCACGGGCGGATTTCGATCATGTCGTCGATTTCTTCCAG GCGCTCGCGAGTTTGCCGGTTCTCGTCGTGCCGGACGAAGTGACGCTCAAGCGGCAAGGCGAGGCCTTGTCCGTCAGTGC AACGTTGCATTCGTTCGGTGCGATCCATCCTATGCGGGATGTCGTGCGTCGAAGCATGGTTAACGATTCGGGTGCTTTCG ATCCCGATGAGGAGGTCGTTTTATACGATCCGTTTCAACCGGCTTCGATTGCGTCGACACTGGACGAAGGTTCGTCGCCG ATGCGGCTGGTCGGTTTGTTGGCCGACCGCGCGCGCGGTCTTGCGCTGATTGAGACGGGGGAAGGAGGGACGACGCTCGA AGCGGGACAAGAGTGGGGCGACGAACGAGTCGCCAATATCGACGCCCGCGCGCTGACGCTGACGAAACGCGACGGCAGCG CGCATTCGCTGACATTGGCGGAGGCCGTCGAATGA
Upstream 100 bases:
>100_bases CGGCGACGGCGCTTGAGATCACCGCGCACCTGAAATGGGACGGTGCGCCGGCGAAGTCCAGAGCGCCGCGAGCGTCATCA CCGAACACGAGGGGTAACAA
Downstream 100 bases:
>100_bases CTTGGATCGCCTTCCTGCGATGGACACTTGCATGTGCTGCCTTTGTCGCAATGACGGCGCGTGCGGCCTTGCCTCCGCTT CCCGCCGAGATGCCGTTCGA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 304; Mature: 304
Protein sequence:
>304_residues MKMTIAGRFGRPAARERVGHALVERLRVPLEAWSVRRRGLVASCIAVTVFMLGANAWIATDSSGVQVSRDALSAAQRRLS EVEAAVAQLPDLRTATSVTRMPANWTSADDIRVISQLASRNDVTLLSIEPAAVTGSGIDAMRPLRVTARADFDHVVDFFQ ALASLPVLVVPDEVTLKRQGEALSVSATLHSFGAIHPMRDVVRRSMVNDSGAFDPDEEVVLYDPFQPASIASTLDEGSSP MRLVGLLADRARGLALIETGEGGTTLEAGQEWGDERVANIDARALTLTKRDGSAHSLTLAEAVE
Sequences:
>Translated_304_residues MKMTIAGRFGRPAARERVGHALVERLRVPLEAWSVRRRGLVASCIAVTVFMLGANAWIATDSSGVQVSRDALSAAQRRLS EVEAAVAQLPDLRTATSVTRMPANWTSADDIRVISQLASRNDVTLLSIEPAAVTGSGIDAMRPLRVTARADFDHVVDFFQ ALASLPVLVVPDEVTLKRQGEALSVSATLHSFGAIHPMRDVVRRSMVNDSGAFDPDEEVVLYDPFQPASIASTLDEGSSP MRLVGLLADRARGLALIETGEGGTTLEAGQEWGDERVANIDARALTLTKRDGSAHSLTLAEAVE >Mature_304_residues MKMTIAGRFGRPAARERVGHALVERLRVPLEAWSVRRRGLVASCIAVTVFMLGANAWIATDSSGVQVSRDALSAAQRRLS EVEAAVAQLPDLRTATSVTRMPANWTSADDIRVISQLASRNDVTLLSIEPAAVTGSGIDAMRPLRVTARADFDHVVDFFQ ALASLPVLVVPDEVTLKRQGEALSVSATLHSFGAIHPMRDVVRRSMVNDSGAFDPDEEVVLYDPFQPASIASTLDEGSSP MRLVGLLADRARGLALIETGEGGTTLEAGQEWGDERVANIDARALTLTKRDGSAHSLTLAEAVE
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 32576; Mature: 32576
Theoretical pI: Translated: 5.22; Mature: 5.22
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.3 %Cys (Translated Protein) 2.6 %Met (Translated Protein) 3.0 %Cys+Met (Translated Protein) 0.3 %Cys (Mature Protein) 2.6 %Met (Mature Protein) 3.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKMTIAGRFGRPAARERVGHALVERLRVPLEAWSVRRRGLVASCIAVTVFMLGANAWIAT CEEEEECCCCCHHHHHHHHHHHHHHHHCCHHHHHHHHCCHHHHHHHHHHHHHCCCEEEEE DSSGVQVSRDALSAAQRRLSEVEAAVAQLPDLRTATSVTRMPANWTSADDIRVISQLASR CCCCCEEHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHCCCCCCCCHHHHHHHHHHHCC NDVTLLSIEPAAVTGSGIDAMRPLRVTARADFDHVVDFFQALASLPVLVVPDEVTLKRQG CCEEEEEECCCEECCCCCCCCCCEEEEECCCHHHHHHHHHHHHHCCEEEECCCEEEECCC EALSVSATLHSFGAIHPMRDVVRRSMVNDSGAFDPDEEVVLYDPFQPASIASTLDEGSSP CEEEEEHHHHHHCCCCHHHHHHHHHHCCCCCCCCCCCCEEEECCCCCHHHHHHHHCCCCC MRLVGLLADRARGLALIETGEGGTTLEAGQEWGDERVANIDARALTLTKRDGSAHSLTLA HHHHHHHHHHCCCEEEEEECCCCCCHHHHHHCCCHHHHCCCCEEEEEEECCCCCCEEEHH EAVE HHCC >Mature Secondary Structure MKMTIAGRFGRPAARERVGHALVERLRVPLEAWSVRRRGLVASCIAVTVFMLGANAWIAT CEEEEECCCCCHHHHHHHHHHHHHHHHCCHHHHHHHHCCHHHHHHHHHHHHHCCCEEEEE DSSGVQVSRDALSAAQRRLSEVEAAVAQLPDLRTATSVTRMPANWTSADDIRVISQLASR CCCCCEEHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHCCCCCCCCHHHHHHHHHHHCC NDVTLLSIEPAAVTGSGIDAMRPLRVTARADFDHVVDFFQALASLPVLVVPDEVTLKRQG CCEEEEEECCCEECCCCCCCCCCEEEEECCCHHHHHHHHHHHHHCCEEEECCCEEEECCC EALSVSATLHSFGAIHPMRDVVRRSMVNDSGAFDPDEEVVLYDPFQPASIASTLDEGSSP CEEEEEHHHHHHCCCCHHHHHHHHHHCCCCCCCCCCCCEEEECCCCCHHHHHHHHCCCCC MRLVGLLADRARGLALIETGEGGTTLEAGQEWGDERVANIDARALTLTKRDGSAHSLTLA HHHHHHHHHHCCCEEEEEECCCCCCHHHHHHCCCHHHHCCCCEEEEEEECCCCCCEEEHH EAVE HHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA