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The map label for this gene is 186477534

Identifier: 186477534

GI number: 186477534

Start: 3134112

End: 3134756

Strand: Reverse

Name: 186477534

Synonym: Bphy_2786

Alternate gene names: NA

Gene position: 3134756-3134112 (Counterclockwise)

Preceding gene: 186477535

Following gene: 186477533

Centisome position: 90.1

GC content: 69.15

Gene sequence:

>645_bases
ATGCAGCGTACCGAACGTCAGTCAGATCCGCAGGCCGGTTCAGGCGACCGCGACGAGGCGGAGCTCGATGCCGCTCGCGG
GAACGGCGAAACGGAAGCGGCCGATCCGCAGCGCGACTACCAGCGCTGCTTCATCGCACTCGTGCCCGACATGGCGACGC
GCGCTGCGCTGTCGGCCATTCCCGTGCCGCCTGCCGCGCGGCGCGTGCCGTACGAGCAATTGCACCTGACGGTCACGTTC
ATCGGCGCACTGCCGCTCGACAGGAGCGCTGCGTTGATCGACGCGGTCACGCGCGAGGCGGTACCGCTCAAACTCGCGCC
CGTCGCCAGGATCGAGCATTGGCCGGGTGCGTCGCATCCGCGCCTGACGGTCGCGACGATTGCCATGTCGGACGAGTTTG
TCGCCCTCGACTGGCGTGTGCGCTCGACGATGATCGCGCTCGGTCTGCCCGTGGACGCGCGCGCATTCAGACCGCATGTC
ACGCTTGCCCGCTATCGCCGCGATGCGGGCGCCGTGGGTCACGCGGCGGAGTTACCCGCCGGACTCACCGCGCGCTTCGA
AGCGCTGACGCTGTACTCGAGCACGCTTGCGCGCAATGGCGCGCGCTACAGGTCCCTGGCGAGCGCGCCCGTCGTCTACG
GATAA

Upstream 100 bases:

>100_bases
GCAGGTCAAAAAACCGGGCGCTCGCAAGAGCGACCCGGTTTTTTTCTGGCATGGCGCGATAGTGTGGCGATCGGCGCAAA
CGCGCACGGAGGTATCGTCG

Downstream 100 bases:

>100_bases
GGGCTGACGTGCCATGCGCGACGCGCGACCAGAAAGAAAACATCGCGGCGCAAGAAACGCCGTAAGAAACTCTCGCGTCA
GCCGTGCGCCGCCAGGTTCC

Product: 2'-5' RNA ligase

Products: NA

Alternate protein names: 2 5' RNA Ligase

Number of amino acids: Translated: 214; Mature: 214

Protein sequence:

>214_residues
MQRTERQSDPQAGSGDRDEAELDAARGNGETEAADPQRDYQRCFIALVPDMATRAALSAIPVPPAARRVPYEQLHLTVTF
IGALPLDRSAALIDAVTREAVPLKLAPVARIEHWPGASHPRLTVATIAMSDEFVALDWRVRSTMIALGLPVDARAFRPHV
TLARYRRDAGAVGHAAELPAGLTARFEALTLYSSTLARNGARYRSLASAPVVYG

Sequences:

>Translated_214_residues
MQRTERQSDPQAGSGDRDEAELDAARGNGETEAADPQRDYQRCFIALVPDMATRAALSAIPVPPAARRVPYEQLHLTVTF
IGALPLDRSAALIDAVTREAVPLKLAPVARIEHWPGASHPRLTVATIAMSDEFVALDWRVRSTMIALGLPVDARAFRPHV
TLARYRRDAGAVGHAAELPAGLTARFEALTLYSSTLARNGARYRSLASAPVVYG
>Mature_214_residues
MQRTERQSDPQAGSGDRDEAELDAARGNGETEAADPQRDYQRCFIALVPDMATRAALSAIPVPPAARRVPYEQLHLTVTF
IGALPLDRSAALIDAVTREAVPLKLAPVARIEHWPGASHPRLTVATIAMSDEFVALDWRVRSTMIALGLPVDARAFRPHV
TLARYRRDAGAVGHAAELPAGLTARFEALTLYSSTLARNGARYRSLASAPVVYG

Specific function: Unknown

COG id: COG1514

COG function: function code J; 2'-5' RNA ligase

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 23148; Mature: 23148

Theoretical pI: Translated: 8.47; Mature: 8.47

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
1.9 %Met     (Translated Protein)
2.3 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
1.9 %Met     (Mature Protein)
2.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MQRTERQSDPQAGSGDRDEAELDAARGNGETEAADPQRDYQRCFIALVPDMATRAALSAI
CCCCCCCCCCCCCCCCCCHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHCCHHHHHHHHCC
PVPPAARRVPYEQLHLTVTFIGALPLDRSAALIDAVTREAVPLKLAPVARIEHWPGASHP
CCCCCHHHCCHHHEEEEEEEEECCCCCCHHHHHHHHHHCCCCEEECCHHHHCCCCCCCCC
RLTVATIAMSDEFVALDWRVRSTMIALGLPVDARAFRPHVTLARYRRDAGAVGHAAELPA
EEEEEEEEECCCEEEEEEEEEEEEEEECCCCCHHHCCCCHHHHHHHHHCCCCCCHHHCCC
GLTARFEALTLYSSTLARNGARYRSLASAPVVYG
CCHHHHHHHHHHHHHHHHCCHHHHHHCCCCCCCC
>Mature Secondary Structure
MQRTERQSDPQAGSGDRDEAELDAARGNGETEAADPQRDYQRCFIALVPDMATRAALSAI
CCCCCCCCCCCCCCCCCCHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHCCHHHHHHHHCC
PVPPAARRVPYEQLHLTVTFIGALPLDRSAALIDAVTREAVPLKLAPVARIEHWPGASHP
CCCCCHHHCCHHHEEEEEEEEECCCCCCHHHHHHHHHHCCCCEEECCHHHHCCCCCCCCC
RLTVATIAMSDEFVALDWRVRSTMIALGLPVDARAFRPHVTLARYRRDAGAVGHAAELPA
EEEEEEEEECCCEEEEEEEEEEEEEEECCCCCHHHCCCCHHHHHHHHHCCCCCCHHHCCC
GLTARFEALTLYSSTLARNGARYRSLASAPVVYG
CCHHHHHHHHHHHHHHHHCCHHHHHHCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA