| Definition | Burkholderia phymatum STM815 chromosome chromosome 1, complete sequence. |
|---|---|
| Accession | NC_010622 |
| Length | 3,479,187 |
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The map label for this gene is hisD [H]
Identifier: 186477507
GI number: 186477507
Start: 3109909
End: 3111231
Strand: Reverse
Name: hisD [H]
Synonym: Bphy_2759
Alternate gene names: 186477507
Gene position: 3111231-3109909 (Counterclockwise)
Preceding gene: 186477508
Following gene: 186477506
Centisome position: 89.42
GC content: 66.14
Gene sequence:
>1323_bases ATGTCTATCAAGATTCGCACACTCGATTCCAGCACTGAAGCTTTCCAGAAGTCGCTGCATGCGGTGCTCGCGTTCGAAGC GAGCGAAGACGAAGCGATCGAGCGCTCGGTCGCGCAGATTCTGGCCGACGTGAAGGCGCGCGGCGACGCCGCCGTGCTCG ACTACACGAACCGTTTCGATCGTCTGAACGCGCAGGACGTGGCGGCGCTCGAGTTGCCGATGTCGGAGCTCGAAGCCGCG CTCGAAGGGCTGGAGCCGAAGCGCCGCGCGGCGCTCGAGGCGGCGGCGGCGCGAGTTCGTGCGTATCACGAGAAGCAGAA GATCGAATGCGGCAGCCATAGCTGGCAGTACACGGAAGCCGACGGCACGGTGCTCGGGCAAAAGGTGACGCCGCTCGACC GCGCGGGCATTTATGTGCCAGGCGGCAAGGCGGCGTATCCGTCGTCGGTGCTGATGAACGCCGTCCCGGCGCGCGTCGCG GGGGTGCGCGAGATCGTCATGGTCGTGCCGACGCCGGACGGCGTGAAGAACCCGCTCGTGCTGGCGGCGGCGCTGCTCGG CGGGGTCGATCGCGTGTTCACGATCGGCGGCGCGCAGGCCGTCGGCGCGCTCGCGTACGGCACGCAAACCATTCCCGCCG TCGACAAGATCTGCGGTCCGGGCAACGCGTATGTCGCATCGGCGAAGCGCCGCGTGTTCGGCGTGGTCGGCATCGACATG ATCGCGGGCCCGTCGGAAATTCTCGTGCTGTGCGACGGCACGACCGACCCGCGCTGGGTCGCGATGGATCTGTTCTCGCA GGCCGAGCACGACGAACTCGCGCAATCCATCCTGCTGTGCCCGGACGATGGCTTCATCGCCCGCGTGGAAGAAGCGATCA ACGAACTGCTGCCGACAATGCCGCGCCGCGATGTAATCCAGGCGTCGCTCGAAGGCCGCGGCGCGCTGGTCAAGGTGCGC GATATGGCGGAAGCCTGCGCGATCGCCAACGACATCGCGCCTGAACACCTCGAAATCTCCGCGCTGGAGCCGCAGCAGTG GGCGCAGCAGATCCGCCACGCGGGCGCGATCTTCCTTGGCCGCTACACGAGCGAAAGCCTCGGCGATTACTGCGCGGGCC CGAATCATGTGCTGCCTACGTCGCGTACCGCACGTTTCTCGTCGCCGCTCGGCGTCTATGATTTCTTCAAGCGCTCGAGC CTGATCGAGGTGAGCGCGGAAGGCGCGCAGACGCTCGGTGAAATTGCCGCCGAACTCGCTTATGGCGAAGGTCTGCAAGC ACATGCGCGCAGCGCCGAGTACCGGATGAAGAACAACGGCTGA
Upstream 100 bases:
>100_bases GACGCGTTTCAGCGCGCGTCGCAACGCACTGGCGCAACGGCCTGACGAACGGGAACACTGCGCGGCGCGACGCGCGCGCC TTACCGAAACGGATACCAGC
Downstream 100 bases:
>100_bases GCTTCGACCGATGGCAGTTTCGGACGCGCTTGATGCGCGTTGAATTCGAGACAGCCTGCGTTTTCGCGAGTTTTCGCGAG AGACAGAGAATCCAACCCGG
Product: histidinol dehydrogenase
Products: NA
Alternate protein names: HDH [H]
Number of amino acids: Translated: 440; Mature: 439
Protein sequence:
>440_residues MSIKIRTLDSSTEAFQKSLHAVLAFEASEDEAIERSVAQILADVKARGDAAVLDYTNRFDRLNAQDVAALELPMSELEAA LEGLEPKRRAALEAAAARVRAYHEKQKIECGSHSWQYTEADGTVLGQKVTPLDRAGIYVPGGKAAYPSSVLMNAVPARVA GVREIVMVVPTPDGVKNPLVLAAALLGGVDRVFTIGGAQAVGALAYGTQTIPAVDKICGPGNAYVASAKRRVFGVVGIDM IAGPSEILVLCDGTTDPRWVAMDLFSQAEHDELAQSILLCPDDGFIARVEEAINELLPTMPRRDVIQASLEGRGALVKVR DMAEACAIANDIAPEHLEISALEPQQWAQQIRHAGAIFLGRYTSESLGDYCAGPNHVLPTSRTARFSSPLGVYDFFKRSS LIEVSAEGAQTLGEIAAELAYGEGLQAHARSAEYRMKNNG
Sequences:
>Translated_440_residues MSIKIRTLDSSTEAFQKSLHAVLAFEASEDEAIERSVAQILADVKARGDAAVLDYTNRFDRLNAQDVAALELPMSELEAA LEGLEPKRRAALEAAAARVRAYHEKQKIECGSHSWQYTEADGTVLGQKVTPLDRAGIYVPGGKAAYPSSVLMNAVPARVA GVREIVMVVPTPDGVKNPLVLAAALLGGVDRVFTIGGAQAVGALAYGTQTIPAVDKICGPGNAYVASAKRRVFGVVGIDM IAGPSEILVLCDGTTDPRWVAMDLFSQAEHDELAQSILLCPDDGFIARVEEAINELLPTMPRRDVIQASLEGRGALVKVR DMAEACAIANDIAPEHLEISALEPQQWAQQIRHAGAIFLGRYTSESLGDYCAGPNHVLPTSRTARFSSPLGVYDFFKRSS LIEVSAEGAQTLGEIAAELAYGEGLQAHARSAEYRMKNNG >Mature_439_residues SIKIRTLDSSTEAFQKSLHAVLAFEASEDEAIERSVAQILADVKARGDAAVLDYTNRFDRLNAQDVAALELPMSELEAAL EGLEPKRRAALEAAAARVRAYHEKQKIECGSHSWQYTEADGTVLGQKVTPLDRAGIYVPGGKAAYPSSVLMNAVPARVAG VREIVMVVPTPDGVKNPLVLAAALLGGVDRVFTIGGAQAVGALAYGTQTIPAVDKICGPGNAYVASAKRRVFGVVGIDMI AGPSEILVLCDGTTDPRWVAMDLFSQAEHDELAQSILLCPDDGFIARVEEAINELLPTMPRRDVIQASLEGRGALVKVRD MAEACAIANDIAPEHLEISALEPQQWAQQIRHAGAIFLGRYTSESLGDYCAGPNHVLPTSRTARFSSPLGVYDFFKRSSL IEVSAEGAQTLGEIAAELAYGEGLQAHARSAEYRMKNNG
Specific function: Catalyzes the sequential NAD-dependent oxidations of L- histidinol to L-histidinaldehyde and then to L-histidine [H]
COG id: COG0141
COG function: function code E; Histidinol dehydrogenase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the histidinol dehydrogenase family [H]
Homologues:
Organism=Escherichia coli, GI1788331, Length=433, Percent_Identity=40.1847575057737, Blast_Score=278, Evalue=4e-76, Organism=Saccharomyces cerevisiae, GI6319819, Length=412, Percent_Identity=35.4368932038835, Blast_Score=236, Evalue=5e-63,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR016161 - InterPro: IPR022695 - InterPro: IPR001692 - InterPro: IPR012131 [H]
Pfam domain/function: PF00815 Histidinol_dh [H]
EC number: =1.1.1.23 [H]
Molecular weight: Translated: 47054; Mature: 46923
Theoretical pI: Translated: 4.87; Mature: 4.87
Prosite motif: PS00611 HISOL_DEHYDROGENASE
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.4 %Cys (Translated Protein) 2.0 %Met (Translated Protein) 3.4 %Cys+Met (Translated Protein) 1.4 %Cys (Mature Protein) 1.8 %Met (Mature Protein) 3.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSIKIRTLDSSTEAFQKSLHAVLAFEASEDEAIERSVAQILADVKARGDAAVLDYTNRFD CEEEEEECCCHHHHHHHHHHHHEEEECCCHHHHHHHHHHHHHHHHCCCCEEEEEHHHHHC RLNAQDVAALELPMSELEAALEGLEPKRRAALEAAAARVRAYHEKQKIECGSHSWQYTEA CCCCCCHHHHHCCHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEECC DGTVLGQKVTPLDRAGIYVPGGKAAYPSSVLMNAVPARVAGVREIVMVVPTPDGVKNPLV CCCEECCCCCCCCCCCEECCCCCCCCCHHHHHHHHHHHHHCCEEEEEEEECCCCCCCHHH LAAALLGGVDRVFTIGGAQAVGALAYGTQTIPAVDKICGPGNAYVASAKRRVFGVVGIDM HHHHHHCCCHHEEEECCHHHHHHHHHCCCCCHHHHHHCCCCCHHHHHHHHHEEEEEEHHH IAGPSEILVLCDGTTDPRWVAMDLFSQAEHDELAQSILLCPDDGFIARVEEAINELLPTM CCCCCEEEEEECCCCCCCEEHHHHHHCCCHHHHHHHEEECCCCCHHHHHHHHHHHHHCCC PRRDVIQASLEGRGALVKVRDMAEACAIANDIAPEHLEISALEPQQWAQQIRHAGAIFLG CCHHHHHHHCCCCCCEEEHHHHHHHHHHHHCCCCCCEEEEECCHHHHHHHHHHCCCEEEE RYTSESLGDYCAGPNHVLPTSRTARFSSPLGVYDFFKRSSLIEVSAEGAQTLGEIAAELA CCCHHHHHHHCCCCCCCCCCCCCCCCCCCCCHHHHHHCCCEEEEECHHHHHHHHHHHHHH YGEGLQAHARSAEYRMKNNG HCCCHHHHHCCCCCEECCCC >Mature Secondary Structure SIKIRTLDSSTEAFQKSLHAVLAFEASEDEAIERSVAQILADVKARGDAAVLDYTNRFD EEEEEECCCHHHHHHHHHHHHEEEECCCHHHHHHHHHHHHHHHHCCCCEEEEEHHHHHC RLNAQDVAALELPMSELEAALEGLEPKRRAALEAAAARVRAYHEKQKIECGSHSWQYTEA CCCCCCHHHHHCCHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEECC DGTVLGQKVTPLDRAGIYVPGGKAAYPSSVLMNAVPARVAGVREIVMVVPTPDGVKNPLV CCCEECCCCCCCCCCCEECCCCCCCCCHHHHHHHHHHHHHCCEEEEEEEECCCCCCCHHH LAAALLGGVDRVFTIGGAQAVGALAYGTQTIPAVDKICGPGNAYVASAKRRVFGVVGIDM HHHHHHCCCHHEEEECCHHHHHHHHHCCCCCHHHHHHCCCCCHHHHHHHHHEEEEEEHHH IAGPSEILVLCDGTTDPRWVAMDLFSQAEHDELAQSILLCPDDGFIARVEEAINELLPTM CCCCCEEEEEECCCCCCCEEHHHHHHCCCHHHHHHHEEECCCCCHHHHHHHHHHHHHCCC PRRDVIQASLEGRGALVKVRDMAEACAIANDIAPEHLEISALEPQQWAQQIRHAGAIFLG CCHHHHHHHCCCCCCEEEHHHHHHHHHHHHCCCCCCEEEEECCHHHHHHHHHHCCCEEEE RYTSESLGDYCAGPNHVLPTSRTARFSSPLGVYDFFKRSSLIEVSAEGAQTLGEIAAELA CCCHHHHHHHCCCCCCCCCCCCCCCCCCCCCHHHHHHCCCEEEEECHHHHHHHHHHHHHH YGEGLQAHARSAEYRMKNNG HCCCHHHHHCCCCCEECCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA