| Definition | Burkholderia phymatum STM815 chromosome chromosome 1, complete sequence. |
|---|---|
| Accession | NC_010622 |
| Length | 3,479,187 |
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The map label for this gene is hisH [H]
Identifier: 186477503
GI number: 186477503
Start: 3106723
End: 3107364
Strand: Reverse
Name: hisH [H]
Synonym: Bphy_2755
Alternate gene names: 186477503
Gene position: 3107364-3106723 (Counterclockwise)
Preceding gene: 186477504
Following gene: 186477502
Centisome position: 89.31
GC content: 63.55
Gene sequence:
>642_bases ATGAAAACTTCGATAGCGATTGTGGATTACGGAATGGGCAACCTGCGTTCGGTTGCCCAGGCGTTGAAGAAAGCCGCGCC GGAAGCGGACGTGGCGATCGTCGACAAGCCCGAAGCGATCCGCGCGGCAGACCGTGTGGTGCTGCCCGGCCAGGGCGCGA TGCCCGACTGCATGCGCTCGCTCGGCGAATCCGGTTTGCAGGAAGCGCTGATTGAAGCGTCGCGTAACAAGCCGCTGATG GGCGTGTGCGTGGGCGAGCAGATGCTGTTCGACTGGAGCGCGGAAGGCGACACGAACGGTCTCGGACTGCTGCCCGGCAA GGTAGTGCGCTTCGATCTGGAAGGCCAGCTGCAGGACGACGGCTCGCGCTTCAAGGTGCCGCAGATGGGCTGGAACCGTG TCCGCCAGGCGCAGCCGCACCCGCTGTGGGACGGCGTCGCGGACAACGCGTTCTTCTACTTCGTGCACAGTTACTACGTC GTGCCTGAAAACGCCGCGCATATGGCGGGCGAAACGGTGTATGGCGTGCCCTTTACCTCGGCGGTGGCGCGGGATAACAT TTTCGCGACCCAGTTCCACCCGGAAAAGAGCGCCGACGCGGGCCTGCGCGTGTATCGCAACTTCGTACACTGGAATCCCT GA
Upstream 100 bases:
>100_bases CGGGAATCAATATCGGCACGCGGCTGATGGGTTTGATGTTGTCGGCGCTGGCGGTGGAGTTCATCGTCAACGGATTAAAG GCGTTGCTGCCTAACTTGAA
Downstream 100 bases:
>100_bases TCGCTGCCGTCAGTTCCGGCATTCATTTCTTTAACGGTTCATGTTTTCCTTCCCCGTAGCTTGCCCCGTTCCCATGCACA CGCATGCGAAGACCGTCGGC
Product: imidazole glycerol phosphate synthase subunit HisH
Products: D-erythro-imidazole-glycerol-phosphate; AICAR; L-glutamate [C]
Alternate protein names: IGP synthase glutamine amidotransferase subunit; IGP synthase subunit hisH; ImGP synthase subunit hisH; IGPS subunit hisH [H]
Number of amino acids: Translated: 213; Mature: 213
Protein sequence:
>213_residues MKTSIAIVDYGMGNLRSVAQALKKAAPEADVAIVDKPEAIRAADRVVLPGQGAMPDCMRSLGESGLQEALIEASRNKPLM GVCVGEQMLFDWSAEGDTNGLGLLPGKVVRFDLEGQLQDDGSRFKVPQMGWNRVRQAQPHPLWDGVADNAFFYFVHSYYV VPENAAHMAGETVYGVPFTSAVARDNIFATQFHPEKSADAGLRVYRNFVHWNP
Sequences:
>Translated_213_residues MKTSIAIVDYGMGNLRSVAQALKKAAPEADVAIVDKPEAIRAADRVVLPGQGAMPDCMRSLGESGLQEALIEASRNKPLM GVCVGEQMLFDWSAEGDTNGLGLLPGKVVRFDLEGQLQDDGSRFKVPQMGWNRVRQAQPHPLWDGVADNAFFYFVHSYYV VPENAAHMAGETVYGVPFTSAVARDNIFATQFHPEKSADAGLRVYRNFVHWNP >Mature_213_residues MKTSIAIVDYGMGNLRSVAQALKKAAPEADVAIVDKPEAIRAADRVVLPGQGAMPDCMRSLGESGLQEALIEASRNKPLM GVCVGEQMLFDWSAEGDTNGLGLLPGKVVRFDLEGQLQDDGSRFKVPQMGWNRVRQAQPHPLWDGVADNAFFYFVHSYYV VPENAAHMAGETVYGVPFTSAVARDNIFATQFHPEKSADAGLRVYRNFVHWNP
Specific function: IGPS catalyzes the conversion of PRFAR and glutamine to IGP, AICAR and glutamate. The hisH subunit provides the glutamine amidotransferase activity that produces the ammonia necessary to hisF for the synthesis of IGP and AICAR [H]
COG id: COG0118
COG function: function code E; Glutamine amidotransferase
Gene ontology:
Cell location: Cytoplasm [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 glutamine amidotransferase type-1 domain [H]
Homologues:
Organism=Escherichia coli, GI1788334, Length=207, Percent_Identity=37.6811594202899, Blast_Score=121, Evalue=3e-29, Organism=Saccharomyces cerevisiae, GI6319725, Length=216, Percent_Identity=33.7962962962963, Blast_Score=106, Evalue=3e-24,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR017926 - InterPro: IPR000991 - InterPro: IPR010139 - InterPro: IPR016226 [H]
Pfam domain/function: PF00117 GATase [H]
EC number: 2.4.2.- [C]
Molecular weight: Translated: 23353; Mature: 23353
Theoretical pI: Translated: 5.62; Mature: 5.62
Prosite motif: PS00442 GATASE_TYPE_I
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.9 %Cys (Translated Protein) 3.8 %Met (Translated Protein) 4.7 %Cys+Met (Translated Protein) 0.9 %Cys (Mature Protein) 3.8 %Met (Mature Protein) 4.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKTSIAIVDYGMGNLRSVAQALKKAAPEADVAIVDKPEAIRAADRVVLPGQGAMPDCMRS CCCEEEEEECCCCCHHHHHHHHHHHCCCCCEEEECCCHHHHHCCEEEECCCCCCHHHHHH LGESGLQEALIEASRNKPLMGVCVGEQMLFDWSAEGDTNGLGLLPGKVVRFDLEGQLQDD HHHHHHHHHHHHHHCCCCEEEEEECCEEEEEECCCCCCCCEECCCCEEEEEEECCCCCCC GSRFKVPQMGWNRVRQAQPHPLWDGVADNAFFYFVHSYYVVPENAAHMAGETVYGVPFTS CCEEECCCCCHHHHHCCCCCCCCCCCCCCEEEEEEEEEEEECCCHHHHCCCEEECCCCHH AVARDNIFATQFHPEKSADAGLRVYRNFVHWNP HHHHCCEEEEEECCCCCCCHHHHHHHHHHCCCC >Mature Secondary Structure MKTSIAIVDYGMGNLRSVAQALKKAAPEADVAIVDKPEAIRAADRVVLPGQGAMPDCMRS CCCEEEEEECCCCCHHHHHHHHHHHCCCCCEEEECCCHHHHHCCEEEECCCCCCHHHHHH LGESGLQEALIEASRNKPLMGVCVGEQMLFDWSAEGDTNGLGLLPGKVVRFDLEGQLQDD HHHHHHHHHHHHHHCCCCEEEEEECCEEEEEECCCCCCCCEECCCCEEEEEEECCCCCCC GSRFKVPQMGWNRVRQAQPHPLWDGVADNAFFYFVHSYYVVPENAAHMAGETVYGVPFTS CCEEECCCCCHHHHHCCCCCCCCCCCCCCEEEEEEEEEEEECCCHHHHCCCEEECCCCHH AVARDNIFATQFHPEKSADAGLRVYRNFVHWNP HHHHCCEEEEEECCCCCCCHHHHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: phosphoribulosylformimino-AICAR-P; L-glutamine [C]
Specific reaction: phosphoribulosylformimino-AICAR-P + L-glutamine = D-erythro-imidazole-glycerol-phosphate + AICAR + L-glutamate [C]
General reaction: Transferases; Glycosyltransferases; Pentosyltransferases [C]
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 12754231 [H]