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The map label for this gene is ychE [H]

Identifier: 186477504

GI number: 186477504

Start: 3107361

End: 3107981

Strand: Reverse

Name: ychE [H]

Synonym: Bphy_2756

Alternate gene names: 186477504

Gene position: 3107981-3107361 (Counterclockwise)

Preceding gene: 186477505

Following gene: 186477503

Centisome position: 89.33

GC content: 57.81

Gene sequence:

>621_bases
ATGGACATCATCAAGTCGTTTATTTCGCTACTTGCGCTGATCAATCCCGTCGGCGCGATACCGTTTTTTCTGAGCCTGAC
GTCGCAGCAATCGATCGCTGAACAGCGCCGCACCATTCGCGTCGCATCGATTTCGGTGTTCTGCGTGATCGCCGTGTCGA
CCTTGCTGGGGCAGCAGATCATCCGCTTCTTCGGCATTTCGATCGGCGCGCTTGAAGTAGGCGGCGGCATCATCATGTTG
CTGATGTCGATCAGCATGCTGAACGCGCAGGTCGGCAATGCCCGCTCGACGCCGGAAGAGCGGCACGAAGCCGAACTGAA
GGACAACATCGCCGTCGTGCCGCTGGCGATTCCGCTGCTGACAGGGCCGGGCTCGATTAGTACCGTCCTCGTCTATTCGG
CCAGCTATCCTCATTGGTACGAGCGGATTAGTCTGATCGCCATTGGTGCGGTGATTGCGGCGCTGTGTTTCGGATCGCTG
AGTCTCGCTGAACCGATTGCGCGCTGGGTCGGTCGGACGGGAATCAATATCGGCACGCGGCTGATGGGTTTGATGTTGTC
GGCGCTGGCGGTGGAGTTCATCGTCAACGGATTAAAGGCGTTGCTGCCTAACTTGAAATGA

Upstream 100 bases:

>100_bases
CGCGGCGGGGCAGATTCCGTCGACCAAGGGCAGCCTCTAAACGACTCTGCGACCAACCGTCACCACTGGAACCGGCCGCG
CCGAGTGCGTCTGGCTTGCA

Downstream 100 bases:

>100_bases
AAACTTCGATAGCGATTGTGGATTACGGAATGGGCAACCTGCGTTCGGTTGCCCAGGCGTTGAAGAAAGCCGCGCCGGAA
GCGGACGTGGCGATCGTCGA

Product: multiple antibiotic resistance (MarC)-like protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 206; Mature: 206

Protein sequence:

>206_residues
MDIIKSFISLLALINPVGAIPFFLSLTSQQSIAEQRRTIRVASISVFCVIAVSTLLGQQIIRFFGISIGALEVGGGIIML
LMSISMLNAQVGNARSTPEERHEAELKDNIAVVPLAIPLLTGPGSISTVLVYSASYPHWYERISLIAIGAVIAALCFGSL
SLAEPIARWVGRTGINIGTRLMGLMLSALAVEFIVNGLKALLPNLK

Sequences:

>Translated_206_residues
MDIIKSFISLLALINPVGAIPFFLSLTSQQSIAEQRRTIRVASISVFCVIAVSTLLGQQIIRFFGISIGALEVGGGIIML
LMSISMLNAQVGNARSTPEERHEAELKDNIAVVPLAIPLLTGPGSISTVLVYSASYPHWYERISLIAIGAVIAALCFGSL
SLAEPIARWVGRTGINIGTRLMGLMLSALAVEFIVNGLKALLPNLK
>Mature_206_residues
MDIIKSFISLLALINPVGAIPFFLSLTSQQSIAEQRRTIRVASISVFCVIAVSTLLGQQIIRFFGISIGALEVGGGIIML
LMSISMLNAQVGNARSTPEERHEAELKDNIAVVPLAIPLLTGPGSISTVLVYSASYPHWYERISLIAIGAVIAALCFGSL
SLAEPIARWVGRTGINIGTRLMGLMLSALAVEFIVNGLKALLPNLK

Specific function: Unknown

COG id: COG2095

COG function: function code U; Multiple antibiotic transporter

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0056 (marC) family [H]

Homologues:

Organism=Escherichia coli, GI1787494, Length=201, Percent_Identity=39.8009950248756, Blast_Score=160, Evalue=5e-41,
Organism=Escherichia coli, GI1787809, Length=195, Percent_Identity=34.8717948717949, Blast_Score=106, Evalue=1e-24,
Organism=Escherichia coli, GI1789842, Length=203, Percent_Identity=29.064039408867, Blast_Score=80, Evalue=1e-16,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002771 [H]

Pfam domain/function: PF01914 MarC [H]

EC number: NA

Molecular weight: Translated: 21958; Mature: 21958

Theoretical pI: Translated: 9.25; Mature: 9.25

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.0 %Cys     (Translated Protein)
2.9 %Met     (Translated Protein)
3.9 %Cys+Met (Translated Protein)
1.0 %Cys     (Mature Protein)
2.9 %Met     (Mature Protein)
3.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDIIKSFISLLALINPVGAIPFFLSLTSQQSIAEQRRTIRVASISVFCVIAVSTLLGQQI
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
IRFFGISIGALEVGGGIIMLLMSISMLNAQVGNARSTPEERHEAELKDNIAVVPLAIPLL
HHHHCCHHHHHHHCCHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHCCEEEEEHHHHHC
TGPGSISTVLVYSASYPHWYERISLIAIGAVIAALCFGSLSLAEPIARWVGRTGINIGTR
CCCCCCEEEEEEECCCCHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHCCCCCCHHHH
LMGLMLSALAVEFIVNGLKALLPNLK
HHHHHHHHHHHHHHHHHHHHHCCCCC
>Mature Secondary Structure
MDIIKSFISLLALINPVGAIPFFLSLTSQQSIAEQRRTIRVASISVFCVIAVSTLLGQQI
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
IRFFGISIGALEVGGGIIMLLMSISMLNAQVGNARSTPEERHEAELKDNIAVVPLAIPLL
HHHHCCHHHHHHHCCHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHCCEEEEEHHHHHC
TGPGSISTVLVYSASYPHWYERISLIAIGAVIAALCFGSLSLAEPIARWVGRTGINIGTR
CCCCCCEEEEEEECCCCHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHCCCCCCHHHH
LMGLMLSALAVEFIVNGLKALLPNLK
HHHHHHHHHHHHHHHHHHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 2015910; 9097039; 9278503 [H]