| Definition | Burkholderia phymatum STM815 chromosome chromosome 1, complete sequence. |
|---|---|
| Accession | NC_010622 |
| Length | 3,479,187 |
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The map label for this gene is yyaJ [H]
Identifier: 186477477
GI number: 186477477
Start: 3084759
End: 3086228
Strand: Direct
Name: yyaJ [H]
Synonym: Bphy_2729
Alternate gene names: 186477477
Gene position: 3084759-3086228 (Clockwise)
Preceding gene: 186477475
Following gene: 186477480
Centisome position: 88.66
GC content: 65.37
Gene sequence:
>1470_bases ATGCAGGAACCCTCTACTGCCACGGTCGGCGCCGAGCCGTCCGTCACCGTCGAGACCGATCTGCCATCGCGCCTCGATCG CTTGCCTTGGGGCCGCTTCCACTCGCTGATCGTGGTTGCGCTCGGCGTGACATGGCTGCTCGACGGGCTGGAAGTGACGC TCGCGGGATCCGTCGCAAGCGCCTTGAAGTCGAGCGACGTGCTGCACTTTTCGAACGCGGACGTGGGGCTCGCGGGCAGC GCATATATCGCGGGCGCGGTGCTAGGCGCGCTCGGCTTCGGCTGGCTGACCGACCGGCTCGGACGCCGCAAGCTGTTCTT CATTACGCTCGCGCTCTATCTGGCGGCGACGGCGGCGACGGCATTCTCGTGGAATCTCGCAAGCTTTCTGTTGTTCCGCT TTTTGACGGGCGCGGGCATCGGCGGCGAATACACCGCAATCAATTCGACCATCCAGGAATTCACGCCCGCCCGCGTGCGT GGCCACACCGATCTTGCCATCAATGGCACCTTCTGGATCGGCGCAGCACTCGGCGCGATCGGTTCGCTGGTGCTGCTCGA TCCGCATCTGTTCCACGGCGACTGGGGCTGGCGCGCGTGCTTCTTCATTGGGGCGGCGCTCGCGCTGGCGATCCTGCCGA TGCGCGTCTGGATCCCCGAAAGCCCGCGCTGGCTGCTCACGCACGGCGAAGAAAAGGAAGCGCGCCGGATCGTCGAAGGT ATCGAGGCGCGCTTCCGCGCGCAAGACCACGCCCTTGCCGACGACGCGCTCAAGCGTCTGCGCCTGCGTGCCCGCGAGCG CACGACGTTGCGCGAGGTCTTCCACACGCTGTTCGTGTTGCATCGGCGCCGCGCGCTGGTCGGGCTGTCGCTGATGACGG CACAGGCGTTCTTCTACAACGCGATCTTCTTCACCTACGCGCTCGTCCTGACGGACTTCTATCACGTGCCCGGCGACCAC ATCGGCTGGTATATCCTGCCGTTCGCGCTCGGGAATTTCGCCGGGCCGCTTTTGATCGGCAGGCTGTTCGATGTGATCGG CCGACGCAAGATGATCGCCGCGACCTACGCAATCTCCGCGATCCTGCTGACCTTGAGCGGCTACCTGTTCGAGCAGGCGT TGCTCACCGTAACGACGCAAACGATCGCGTGGATGGTGATTTTCTTCTTCGCGTCGGCGGCGGCAAGCTCGGCGTATCTA ACCGTCAGCGAATCGTTTCCGCTCGAAATCCGCGCGCTCGCGATCGCGGTGTTTTACGCGTTCGGCACGGCGCTGGGCGG TATCGCGGGGCCGGCGTTCTTCGGCCGTCTGATTGACACGCAGCAGCGCAGCGAAGTGTTCTCCGGCTATCTGGTCGGCT CGGCGCTGATGCTGGCCGCGGCGCTCATCGGGGCGATCTGGGGCGTCGACGCCGAGCGCCGTTCGCTCGAGACGGTCGCG GCGCCGTTGTCAGCCGTCGAGGATCAGTAA
Upstream 100 bases:
>100_bases GACAGGATACGCCCTTCGCCCGGCGCTCACAGCAGCTTCCGAAAATGTGCCGGCTGTCCGGCTTACCTGTCAGCATTGGC TTGCCCATTCAGGAGACCCA
Downstream 100 bases:
>100_bases GGCCGCAGCACCACACAAAAAAACGGCCCAGATGGGCCGCGTTGCGTCGTCCTGCAAGCAAGAACTGAAGATCGCTCAGA ACGCCTTGTTCCACGCGCCC
Product: major facilitator transporter
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 489; Mature: 489
Protein sequence:
>489_residues MQEPSTATVGAEPSVTVETDLPSRLDRLPWGRFHSLIVVALGVTWLLDGLEVTLAGSVASALKSSDVLHFSNADVGLAGS AYIAGAVLGALGFGWLTDRLGRRKLFFITLALYLAATAATAFSWNLASFLLFRFLTGAGIGGEYTAINSTIQEFTPARVR GHTDLAINGTFWIGAALGAIGSLVLLDPHLFHGDWGWRACFFIGAALALAILPMRVWIPESPRWLLTHGEEKEARRIVEG IEARFRAQDHALADDALKRLRLRARERTTLREVFHTLFVLHRRRALVGLSLMTAQAFFYNAIFFTYALVLTDFYHVPGDH IGWYILPFALGNFAGPLLIGRLFDVIGRRKMIAATYAISAILLTLSGYLFEQALLTVTTQTIAWMVIFFFASAAASSAYL TVSESFPLEIRALAIAVFYAFGTALGGIAGPAFFGRLIDTQQRSEVFSGYLVGSALMLAAALIGAIWGVDAERRSLETVA APLSAVEDQ
Sequences:
>Translated_489_residues MQEPSTATVGAEPSVTVETDLPSRLDRLPWGRFHSLIVVALGVTWLLDGLEVTLAGSVASALKSSDVLHFSNADVGLAGS AYIAGAVLGALGFGWLTDRLGRRKLFFITLALYLAATAATAFSWNLASFLLFRFLTGAGIGGEYTAINSTIQEFTPARVR GHTDLAINGTFWIGAALGAIGSLVLLDPHLFHGDWGWRACFFIGAALALAILPMRVWIPESPRWLLTHGEEKEARRIVEG IEARFRAQDHALADDALKRLRLRARERTTLREVFHTLFVLHRRRALVGLSLMTAQAFFYNAIFFTYALVLTDFYHVPGDH IGWYILPFALGNFAGPLLIGRLFDVIGRRKMIAATYAISAILLTLSGYLFEQALLTVTTQTIAWMVIFFFASAAASSAYL TVSESFPLEIRALAIAVFYAFGTALGGIAGPAFFGRLIDTQQRSEVFSGYLVGSALMLAAALIGAIWGVDAERRSLETVA APLSAVEDQ >Mature_489_residues MQEPSTATVGAEPSVTVETDLPSRLDRLPWGRFHSLIVVALGVTWLLDGLEVTLAGSVASALKSSDVLHFSNADVGLAGS AYIAGAVLGALGFGWLTDRLGRRKLFFITLALYLAATAATAFSWNLASFLLFRFLTGAGIGGEYTAINSTIQEFTPARVR GHTDLAINGTFWIGAALGAIGSLVLLDPHLFHGDWGWRACFFIGAALALAILPMRVWIPESPRWLLTHGEEKEARRIVEG IEARFRAQDHALADDALKRLRLRARERTTLREVFHTLFVLHRRRALVGLSLMTAQAFFYNAIFFTYALVLTDFYHVPGDH IGWYILPFALGNFAGPLLIGRLFDVIGRRKMIAATYAISAILLTLSGYLFEQALLTVTTQTIAWMVIFFFASAAASSAYL TVSESFPLEIRALAIAVFYAFGTALGGIAGPAFFGRLIDTQQRSEVFSGYLVGSALMLAAALIGAIWGVDAERRSLETVA APLSAVEDQ
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cell membrane; Multi-pass membrane protein (Probable) [H]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the major facilitator superfamily. Sugar transporter (TC 2.A.1.1) family [H]
Homologues:
Organism=Homo sapiens, GI7662270, Length=238, Percent_Identity=29.4117647058824, Blast_Score=81, Evalue=2e-15, Organism=Homo sapiens, GI90669191, Length=369, Percent_Identity=27.3712737127371, Blast_Score=79, Evalue=1e-14, Organism=Homo sapiens, GI24497497, Length=369, Percent_Identity=27.3712737127371, Blast_Score=79, Evalue=1e-14, Organism=Homo sapiens, GI296080721, Length=293, Percent_Identity=25.5972696245734, Blast_Score=77, Evalue=2e-14, Organism=Homo sapiens, GI296080719, Length=270, Percent_Identity=25.9259259259259, Blast_Score=76, Evalue=6e-14, Organism=Homo sapiens, GI24497499, Length=270, Percent_Identity=25.9259259259259, Blast_Score=76, Evalue=6e-14, Organism=Homo sapiens, GI4506999, Length=274, Percent_Identity=27.7372262773723, Blast_Score=73, Evalue=7e-13, Organism=Homo sapiens, GI23510410, Length=274, Percent_Identity=27.007299270073, Blast_Score=72, Evalue=1e-12, Organism=Homo sapiens, GI296080734, Length=261, Percent_Identity=25.2873563218391, Blast_Score=71, Evalue=2e-12, Organism=Homo sapiens, GI213021148, Length=257, Percent_Identity=24.124513618677, Blast_Score=70, Evalue=7e-12, Organism=Homo sapiens, GI216548223, Length=232, Percent_Identity=28.448275862069, Blast_Score=69, Evalue=9e-12, Organism=Homo sapiens, GI203098995, Length=312, Percent_Identity=27.8846153846154, Blast_Score=67, Evalue=3e-11, Organism=Homo sapiens, GI24497478, Length=351, Percent_Identity=23.9316239316239, Blast_Score=66, Evalue=7e-11, Organism=Homo sapiens, GI24497480, Length=351, Percent_Identity=23.9316239316239, Blast_Score=66, Evalue=8e-11, Organism=Escherichia coli, GI1786229, Length=427, Percent_Identity=27.4004683840749, Blast_Score=99, Evalue=5e-22, Organism=Escherichia coli, GI1788074, Length=439, Percent_Identity=25.7403189066059, Blast_Score=93, Evalue=5e-20, Organism=Escherichia coli, GI1788068, Length=483, Percent_Identity=25.4658385093168, Blast_Score=89, Evalue=5e-19, Organism=Escherichia coli, GI87082159, Length=263, Percent_Identity=28.5171102661597, Blast_Score=89, Evalue=7e-19, Organism=Escherichia coli, GI1789207, Length=403, Percent_Identity=25.3101736972705, Blast_Score=74, Evalue=3e-14, Organism=Escherichia coli, GI1790550, Length=418, Percent_Identity=23.9234449760766, Blast_Score=71, Evalue=2e-13, Organism=Escherichia coli, GI87082231, Length=231, Percent_Identity=29.004329004329, Blast_Score=69, Evalue=7e-13, Organism=Escherichia coli, GI1789312, Length=416, Percent_Identity=24.0384615384615, Blast_Score=65, Evalue=7e-12, Organism=Caenorhabditis elegans, GI193202825, Length=296, Percent_Identity=23.9864864864865, Blast_Score=84, Evalue=1e-16, Organism=Caenorhabditis elegans, GI71986689, Length=296, Percent_Identity=23.9864864864865, Blast_Score=84, Evalue=1e-16, Organism=Caenorhabditis elegans, GI32564663, Length=443, Percent_Identity=25.5079006772009, Blast_Score=83, Evalue=3e-16, Organism=Caenorhabditis elegans, GI17565976, Length=275, Percent_Identity=25.4545454545455, Blast_Score=70, Evalue=3e-12, Organism=Caenorhabditis elegans, GI17565978, Length=299, Percent_Identity=23.4113712374582, Blast_Score=68, Evalue=9e-12, Organism=Caenorhabditis elegans, GI212645980, Length=380, Percent_Identity=24.2105263157895, Blast_Score=67, Evalue=3e-11, Organism=Saccharomyces cerevisiae, GI6323653, Length=376, Percent_Identity=24.7340425531915, Blast_Score=80, Evalue=8e-16, Organism=Saccharomyces cerevisiae, GI6323512, Length=406, Percent_Identity=24.8768472906404, Blast_Score=69, Evalue=2e-12, Organism=Saccharomyces cerevisiae, GI6320745, Length=303, Percent_Identity=25.7425742574257, Blast_Score=66, Evalue=1e-11, Organism=Saccharomyces cerevisiae, GI6320595, Length=220, Percent_Identity=27.2727272727273, Blast_Score=65, Evalue=3e-11, Organism=Saccharomyces cerevisiae, GI6321100, Length=379, Percent_Identity=25.3298153034301, Blast_Score=64, Evalue=4e-11, Organism=Saccharomyces cerevisiae, GI6320766, Length=380, Percent_Identity=23.9473684210526, Blast_Score=64, Evalue=7e-11, Organism=Drosophila melanogaster, GI24652795, Length=361, Percent_Identity=25.4847645429363, Blast_Score=80, Evalue=4e-15, Organism=Drosophila melanogaster, GI24640198, Length=327, Percent_Identity=23.5474006116208, Blast_Score=80, Evalue=4e-15, Organism=Drosophila melanogaster, GI24640196, Length=327, Percent_Identity=23.5474006116208, Blast_Score=80, Evalue=4e-15, Organism=Drosophila melanogaster, GI24640200, Length=327, Percent_Identity=23.5474006116208, Blast_Score=80, Evalue=4e-15, Organism=Drosophila melanogaster, GI24652793, Length=361, Percent_Identity=25.4847645429363, Blast_Score=79, Evalue=6e-15, Organism=Drosophila melanogaster, GI19922874, Length=463, Percent_Identity=23.9740820734341, Blast_Score=76, Evalue=6e-14, Organism=Drosophila melanogaster, GI221330907, Length=365, Percent_Identity=24.1095890410959, Blast_Score=69, Evalue=7e-12, Organism=Drosophila melanogaster, GI62484254, Length=386, Percent_Identity=23.3160621761658, Blast_Score=67, Evalue=4e-11,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR020846 - InterPro: IPR016196 - InterPro: IPR005828 [H]
Pfam domain/function: PF00083 Sugar_tr [H]
EC number: NA
Molecular weight: Translated: 53156; Mature: 53156
Theoretical pI: Translated: 7.43; Mature: 7.43
Prosite motif: PS50850 MFS
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.2 %Cys (Translated Protein) 1.2 %Met (Translated Protein) 1.4 %Cys+Met (Translated Protein) 0.2 %Cys (Mature Protein) 1.2 %Met (Mature Protein) 1.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MQEPSTATVGAEPSVTVETDLPSRLDRLPWGRFHSLIVVALGVTWLLDGLEVTLAGSVAS CCCCCCCCCCCCCCEEEECCCHHHHHHCCCHHHHHHHHHHHHHHHHHCCCCEEEHHHHHH ALKSSDVLHFSNADVGLAGSAYIAGAVLGALGFGWLTDRLGRRKLFFITLALYLAATAAT HHHHCCCEEECCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHH AFSWNLASFLLFRFLTGAGIGGEYTAINSTIQEFTPARVRGHTDLAINGTFWIGAALGAI HHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHCCCHHHCCCCCEEEECHHHHHHHHHHH GSLVLLDPHLFHGDWGWRACFFIGAALALAILPMRVWIPESPRWLLTHGEEKEARRIVEG HHHHEECCEEECCCCHHHHHHHHHHHHHHHHHHHHEECCCCCCEEEECCCHHHHHHHHHH IEARFRAQDHALADDALKRLRLRARERTTLREVFHTLFVLHRRRALVGLSLMTAQAFFYN HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH AIFFTYALVLTDFYHVPGDHIGWYILPFALGNFAGPLLIGRLFDVIGRRKMIAATYAISA HHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHH ILLTLSGYLFEQALLTVTTQTIAWMVIFFFASAAASSAYLTVSESFPLEIRALAIAVFYA HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEECCCCHHHHHHHHHHHHH FGTALGGIAGPAFFGRLIDTQQRSEVFSGYLVGSALMLAAALIGAIWGVDAERRSLETVA HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHH APLSAVEDQ HHHHHHCCC >Mature Secondary Structure MQEPSTATVGAEPSVTVETDLPSRLDRLPWGRFHSLIVVALGVTWLLDGLEVTLAGSVAS CCCCCCCCCCCCCCEEEECCCHHHHHHCCCHHHHHHHHHHHHHHHHHCCCCEEEHHHHHH ALKSSDVLHFSNADVGLAGSAYIAGAVLGALGFGWLTDRLGRRKLFFITLALYLAATAAT HHHHCCCEEECCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHH AFSWNLASFLLFRFLTGAGIGGEYTAINSTIQEFTPARVRGHTDLAINGTFWIGAALGAI HHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHCCCHHHCCCCCEEEECHHHHHHHHHHH GSLVLLDPHLFHGDWGWRACFFIGAALALAILPMRVWIPESPRWLLTHGEEKEARRIVEG HHHHEECCEEECCCCHHHHHHHHHHHHHHHHHHHHEECCCCCCEEEECCCHHHHHHHHHH IEARFRAQDHALADDALKRLRLRARERTTLREVFHTLFVLHRRRALVGLSLMTAQAFFYN HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH AIFFTYALVLTDFYHVPGDHIGWYILPFALGNFAGPLLIGRLFDVIGRRKMIAATYAISA HHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHH ILLTLSGYLFEQALLTVTTQTIAWMVIFFFASAAASSAYLTVSESFPLEIRALAIAVFYA HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEECCCCHHHHHHHHHHHHH FGTALGGIAGPAFFGRLIDTQQRSEVFSGYLVGSALMLAAALIGAIWGVDAERRSLETVA HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHH APLSAVEDQ HHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 7584024; 8011666; 9384377 [H]