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The map label for this gene is ubiX [C]

Identifier: 186477472

GI number: 186477472

Start: 3079284

End: 3079892

Strand: Direct

Name: ubiX [C]

Synonym: Bphy_2724

Alternate gene names: 186477472

Gene position: 3079284-3079892 (Clockwise)

Preceding gene: 186477471

Following gene: 186477473

Centisome position: 88.51

GC content: 63.71

Gene sequence:

>609_bases
ATGGAAACACGCGTCGCCCGTCAGGAAAACGCACGCCGGCTGATCGTCGCGATCACGGGTGCGACAGGCGCCATCTACGG
CATCCGCCTGCTCCAGACGCTGCGCACACTCGGCGGTGTCGAAAGCCATCTGCTGATCTCCAGCGCCGGATGGCTCAATA
TCCAGCACGAACTTCAACTGTCACGCGACGACGTGCATCCGCTCGCGGATGTCGTTCATTCGGTGCGCGATGTCGGCGCG
AGCGTCGCATCCGGCTCGTTTGCGACCGACGGCATGATCGTCGCGCCCTGCTCGATGAAAACGCTCGCGAGCATCGCGCA
TGGCCTCTCCGACAATCTGATCACGCGCGCCGCCGACGTCACGCTCAAGGAACGCCGAAGGCTCGTGCTGATGGTCCGTG
AAACGCCGTTCAATCTCGCGCATCTGCGCAACATGACGGCCGTCACCGAAATGGGCGGCATCATTTTTCCGCCGCTTCCC
GCCTTCTACACTCGGCCTGAGACGATCGACCAGATGGTCGACCATACCGTCGCGCGCGTGCTCGATCTTTTTGCGCTGGG
TCCGGCGCTGGCGCCCGCCTGGCACGGGTTGAACCGTCCGCAGGCGTAA

Upstream 100 bases:

>100_bases
GTTCGTCGGCGGCTCGGACATCATGATGGAGATGTATCAGTCGGGCGAACTGCAGCAACTCTTCGCCGCCGCCTGATCCA
CGCAGAGGGGCGCCGCCGTC

Downstream 100 bases:

>100_bases
GCCCGGCCACCCGGCCTTGAGCATTCACAACTGCCGCGAGACAATCAAATGCAGATTTGACCGTTTATCAAACGGCAGTG
CGGCCTTATATTCGGTTCAA

Product: 3-octaprenyl-4-hydroxybenzoate carboxy-lyase

Products: 2-octaprenylphenol; CO2 [C]

Alternate protein names: NA

Number of amino acids: Translated: 202; Mature: 202

Protein sequence:

>202_residues
METRVARQENARRLIVAITGATGAIYGIRLLQTLRTLGGVESHLLISSAGWLNIQHELQLSRDDVHPLADVVHSVRDVGA
SVASGSFATDGMIVAPCSMKTLASIAHGLSDNLITRAADVTLKERRRLVLMVRETPFNLAHLRNMTAVTEMGGIIFPPLP
AFYTRPETIDQMVDHTVARVLDLFALGPALAPAWHGLNRPQA

Sequences:

>Translated_202_residues
METRVARQENARRLIVAITGATGAIYGIRLLQTLRTLGGVESHLLISSAGWLNIQHELQLSRDDVHPLADVVHSVRDVGA
SVASGSFATDGMIVAPCSMKTLASIAHGLSDNLITRAADVTLKERRRLVLMVRETPFNLAHLRNMTAVTEMGGIIFPPLP
AFYTRPETIDQMVDHTVARVLDLFALGPALAPAWHGLNRPQA
>Mature_202_residues
METRVARQENARRLIVAITGATGAIYGIRLLQTLRTLGGVESHLLISSAGWLNIQHELQLSRDDVHPLADVVHSVRDVGA
SVASGSFATDGMIVAPCSMKTLASIAHGLSDNLITRAADVTLKERRRLVLMVRETPFNLAHLRNMTAVTEMGGIIFPPLP
AFYTRPETIDQMVDHTVARVLDLFALGPALAPAWHGLNRPQA

Specific function: Unknown

COG id: COG0163

COG function: function code H; 3-polyprenyl-4-hydroxybenzoate decarboxylase

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the polyprenyl p-hydroxybenzoate / phenylacrylic acid decarboxylases family [H]

Homologues:

Organism=Escherichia coli, GI1788650, Length=187, Percent_Identity=54.0106951871658, Blast_Score=205, Evalue=1e-54,
Organism=Saccharomyces cerevisiae, GI6320746, Length=187, Percent_Identity=50.8021390374332, Blast_Score=196, Evalue=3e-51,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003382
- InterPro:   IPR004507 [H]

Pfam domain/function: PF02441 Flavoprotein [H]

EC number: 4.1.1.- [C]

Molecular weight: Translated: 21943; Mature: 21943

Theoretical pI: Translated: 8.56; Mature: 8.56

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
3.5 %Met     (Translated Protein)
4.0 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
3.5 %Met     (Mature Protein)
4.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
METRVARQENARRLIVAITGATGAIYGIRLLQTLRTLGGVESHLLISSAGWLNIQHELQL
CCCCCCHHCCCCEEEEEEECCCHHHHHHHHHHHHHHHCCCHHHEEEECCCCEEEHHHEEC
SRDDVHPLADVVHSVRDVGASVASGSFATDGMIVAPCSMKTLASIAHGLSDNLITRAADV
CCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCEEECCCCHHHHHHHHHCCCHHHHHHHHHH
TLKERRRLVLMVRETPFNLAHLRNMTAVTEMGGIIFPPLPAFYTRPETIDQMVDHTVARV
HHHHCCEEEEEEECCCCCHHHHHHHHHHHHCCCEECCCCCCCCCCHHHHHHHHHHHHHHH
LDLFALGPALAPAWHGLNRPQA
HHHHHHCHHHHHHHHCCCCCCC
>Mature Secondary Structure
METRVARQENARRLIVAITGATGAIYGIRLLQTLRTLGGVESHLLISSAGWLNIQHELQL
CCCCCCHHCCCCEEEEEEECCCHHHHHHHHHHHHHHHCCCHHHEEEECCCCEEEHHHEEC
SRDDVHPLADVVHSVRDVGASVASGSFATDGMIVAPCSMKTLASIAHGLSDNLITRAADV
CCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCEEECCCCHHHHHHHHHCCCHHHHHHHHHH
TLKERRRLVLMVRETPFNLAHLRNMTAVTEMGGIIFPPLPAFYTRPETIDQMVDHTVARV
HHHHCCEEEEEEECCCCCHHHHHHHHHHHHCCCEECCCCCCCCCCHHHHHHHHHHHHHHH
LDLFALGPALAPAWHGLNRPQA
HHHHHHCHHHHHHHHCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: 3-octaprenyl-4-hydroxybenzoate [C]

Specific reaction: 3-octaprenyl-4-hydroxybenzoate = 2-octaprenylphenol + CO2 [C]

General reaction: Carbon-Carbon Lyases; Carboxy-Lyases [C]

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 10761919 [H]