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The map label for this gene is ydhD [C]

Identifier: 186477471

GI number: 186477471

Start: 3078948

End: 3079259

Strand: Direct

Name: ydhD [C]

Synonym: Bphy_2723

Alternate gene names: 186477471

Gene position: 3078948-3079259 (Clockwise)

Preceding gene: 186477470

Following gene: 186477472

Centisome position: 88.5

GC content: 57.69

Gene sequence:

>312_bases
ATGGACACGCAACAACGCATCAAGCAAATCGTCGACGAAAATTCCGTCGTGCTCTTCATGAAAGGCAACGCGCAATTCCC
GATGTGTGGCTTCTCGGGCCGCGCAGTGCAGATCCTGAAGGCATGCGGTGTCGATCAGTTCAAGACGGTCAACGTCCTCG
AAGACGACGCCGTGCGCCAGGGCATCAAGGAATTCTCGAACTGGCCGACCATTCCGCAGCTGTACGTGAACGGCGAGTTC
GTCGGCGGCTCGGACATCATGATGGAGATGTATCAGTCGGGCGAACTGCAGCAACTCTTCGCCGCCGCCTGA

Upstream 100 bases:

>100_bases
CACAACGGACGGGCAACCGATCCAGCCATCGGTCGTGAGCGGCGAAATCCGCTATCATTTGTCTCTATCCCCAACAAACA
CCGGAATCGCAAGGTCAGTC

Downstream 100 bases:

>100_bases
TCCACGCAGAGGGGCGCCGCCGTCATGGAAACACGCGTCGCCCGTCAGGAAAACGCACGCCGGCTGATCGTCGCGATCAC
GGGTGCGACAGGCGCCATCT

Product: glutaredoxin-like protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 103; Mature: 103

Protein sequence:

>103_residues
MDTQQRIKQIVDENSVVLFMKGNAQFPMCGFSGRAVQILKACGVDQFKTVNVLEDDAVRQGIKEFSNWPTIPQLYVNGEF
VGGSDIMMEMYQSGELQQLFAAA

Sequences:

>Translated_103_residues
MDTQQRIKQIVDENSVVLFMKGNAQFPMCGFSGRAVQILKACGVDQFKTVNVLEDDAVRQGIKEFSNWPTIPQLYVNGEF
VGGSDIMMEMYQSGELQQLFAAA
>Mature_103_residues
MDTQQRIKQIVDENSVVLFMKGNAQFPMCGFSGRAVQILKACGVDQFKTVNVLEDDAVRQGIKEFSNWPTIPQLYVNGEF
VGGSDIMMEMYQSGELQQLFAAA

Specific function: Unknown

COG id: COG0278

COG function: function code O; Glutaredoxin-related protein

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 glutaredoxin domain [H]

Homologues:

Organism=Homo sapiens, GI42516576, Length=92, Percent_Identity=52.1739130434783, Blast_Score=114, Evalue=1e-26,
Organism=Homo sapiens, GI95113651, Length=93, Percent_Identity=52.6881720430108, Blast_Score=108, Evalue=1e-24,
Organism=Escherichia coli, GI1787943, Length=98, Percent_Identity=50, Blast_Score=114, Evalue=1e-27,
Organism=Caenorhabditis elegans, GI17556042, Length=99, Percent_Identity=47.4747474747475, Blast_Score=99, Evalue=5e-22,
Organism=Caenorhabditis elegans, GI71988153, Length=86, Percent_Identity=48.8372093023256, Blast_Score=94, Evalue=1e-20,
Organism=Caenorhabditis elegans, GI71988159, Length=86, Percent_Identity=44.1860465116279, Blast_Score=90, Evalue=2e-19,
Organism=Saccharomyces cerevisiae, GI6325198, Length=104, Percent_Identity=50.9615384615385, Blast_Score=112, Evalue=1e-26,
Organism=Saccharomyces cerevisiae, GI6320303, Length=84, Percent_Identity=50, Blast_Score=90, Evalue=8e-20,
Organism=Saccharomyces cerevisiae, GI6321022, Length=84, Percent_Identity=48.8095238095238, Blast_Score=87, Evalue=5e-19,
Organism=Drosophila melanogaster, GI24642023, Length=88, Percent_Identity=53.4090909090909, Blast_Score=112, Evalue=4e-26,
Organism=Drosophila melanogaster, GI19921242, Length=94, Percent_Identity=39.3617021276596, Blast_Score=89, Evalue=4e-19,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002109
- InterPro:   IPR014434
- InterPro:   IPR004480
- InterPro:   IPR012336
- InterPro:   IPR012335 [H]

Pfam domain/function: PF00462 Glutaredoxin [H]

EC number: NA

Molecular weight: Translated: 11499; Mature: 11499

Theoretical pI: Translated: 4.33; Mature: 4.33

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.9 %Cys     (Translated Protein)
5.8 %Met     (Translated Protein)
7.8 %Cys+Met (Translated Protein)
1.9 %Cys     (Mature Protein)
5.8 %Met     (Mature Protein)
7.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDTQQRIKQIVDENSVVLFMKGNAQFPMCGFSGRAVQILKACGVDQFKTVNVLEDDAVRQ
CCHHHHHHHHHCCCCEEEEEECCCCCCCCCCCCHHHHHHHHCCCCCCEEECCCCHHHHHH
GIKEFSNWPTIPQLYVNGEFVGGSDIMMEMYQSGELQQLFAAA
HHHHHHCCCCCCEEEECCEEECCHHHHHHHHHCCCHHHHHHCC
>Mature Secondary Structure
MDTQQRIKQIVDENSVVLFMKGNAQFPMCGFSGRAVQILKACGVDQFKTVNVLEDDAVRQ
CCHHHHHHHHHCCCCEEEEEECCCCCCCCCCCCHHHHHHHHCCCCCCEEECCCCHHHHHH
GIKEFSNWPTIPQLYVNGEFVGGSDIMMEMYQSGELQQLFAAA
HHHHHHCCCCCCEEEECCEEECCHHHHHHHHHCCCHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8905231 [H]