| Definition | Burkholderia phymatum STM815 chromosome chromosome 1, complete sequence. |
|---|---|
| Accession | NC_010622 |
| Length | 3,479,187 |
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The map label for this gene is creB [C]
Identifier: 186477467
GI number: 186477467
Start: 3074668
End: 3075414
Strand: Direct
Name: creB [C]
Synonym: Bphy_2719
Alternate gene names: 186477467
Gene position: 3074668-3075414 (Clockwise)
Preceding gene: 186477462
Following gene: 186477468
Centisome position: 88.37
GC content: 63.19
Gene sequence:
>747_bases ATGCGAATCGCCCTTATTGAGCCTGACCTCCGGCATGCGGAAATCGTCGGCCGGCTACTGCTTGCCGGGGGTCATGCCTG CCATCATTTCGCCGCCAGTGCACCTTTTCTCGCGGGCGCCGAACACGAATTCTTCGATCTCCTCGTCACCGACGCATTCT GCGGCGACGCCGCAGCGGAAGACGTCATCGCGCGCGCGCGCAAGGTTCTGCCCGGCCTGCCCGTCGTGGCCCTGATGAGC GCGCCGCGCGAAAGCGAACTCGTCGCGATGCTGCAGGCAGGGGCCGACGACTGCCTGTCCAAGCCCGTACGCGGTCCGGA AATGCTGGCGCGCATCGAAGCGTTGATGCGCCGGGCGGGAATACGCCGCCCGCGCAACCGTGCGCGCGAAATGTTCGGCG AGTACGCATTCGATGTGGGCCGCTCCAGCGTCAGCTTTCGGGGACAAAGCATCACGATGACGCCGAAGGAACTGCAGTTC GCGCTACTGCTGTTTACCAATATGTCGAGACCTGTTTCAAGGGCGCACATCCTCGAAACAGTCTGGTCCCGGCGCCGCGA CGTAAGGTCGCGCACGCTCGACACGCACGCATCACGCATCCGCACCAAGCTCGAACTGCGGCCCGAATTCGGCTACACGC TGACGCCGCTGTATGGCTACGGCTACCGTCTCGACCGGATTCCCGTTGAGAATCCGGATACCACGGATAAACCCCCGCCG GCTGAAAGAATCGTGGAAACGCTATAA
Upstream 100 bases:
>100_bases TCGGCACGGCTTTCTGCGTAGCGGTTGAGTTTAGGGGCCGGGGTAAGGTTAAGCAAGCTGAAAGCCTCCGCGCCAGATCG CTGCGCCCATCCCACCATCA
Downstream 100 bases:
>100_bases TATTGGGCTTAACCATAGCCCCAATACGTCGCGCCAAAAACGCCGTAGCGTCCCCGTGCAACTGCTAACGATCGGAATCA ATCACCACACAGCGCCTGTC
Product: two component transcriptional regulator
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 248; Mature: 248
Protein sequence:
>248_residues MRIALIEPDLRHAEIVGRLLLAGGHACHHFAASAPFLAGAEHEFFDLLVTDAFCGDAAAEDVIARARKVLPGLPVVALMS APRESELVAMLQAGADDCLSKPVRGPEMLARIEALMRRAGIRRPRNRAREMFGEYAFDVGRSSVSFRGQSITMTPKELQF ALLLFTNMSRPVSRAHILETVWSRRRDVRSRTLDTHASRIRTKLELRPEFGYTLTPLYGYGYRLDRIPVENPDTTDKPPP AERIVETL
Sequences:
>Translated_248_residues MRIALIEPDLRHAEIVGRLLLAGGHACHHFAASAPFLAGAEHEFFDLLVTDAFCGDAAAEDVIARARKVLPGLPVVALMS APRESELVAMLQAGADDCLSKPVRGPEMLARIEALMRRAGIRRPRNRAREMFGEYAFDVGRSSVSFRGQSITMTPKELQF ALLLFTNMSRPVSRAHILETVWSRRRDVRSRTLDTHASRIRTKLELRPEFGYTLTPLYGYGYRLDRIPVENPDTTDKPPP AERIVETL >Mature_248_residues MRIALIEPDLRHAEIVGRLLLAGGHACHHFAASAPFLAGAEHEFFDLLVTDAFCGDAAAEDVIARARKVLPGLPVVALMS APRESELVAMLQAGADDCLSKPVRGPEMLARIEALMRRAGIRRPRNRAREMFGEYAFDVGRSSVSFRGQSITMTPKELQF ALLLFTNMSRPVSRAHILETVWSRRRDVRSRTLDTHASRIRTKLELRPEFGYTLTPLYGYGYRLDRIPVENPDTTDKPPP AERIVETL
Specific function: Member Of The Two-Component Regulatory System Crec/Creb Involved In Catabolic Regulation. [C]
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 response regulatory domain [H]
Homologues:
Organism=Escherichia coli, GI1790860, Length=227, Percent_Identity=26.431718061674, Blast_Score=76, Evalue=2e-15, Organism=Escherichia coli, GI1790552, Length=207, Percent_Identity=27.536231884058, Blast_Score=76, Evalue=2e-15, Organism=Escherichia coli, GI1789402, Length=224, Percent_Identity=29.0178571428571, Blast_Score=74, Evalue=8e-15, Organism=Escherichia coli, GI1789809, Length=225, Percent_Identity=23.5555555555556, Blast_Score=74, Evalue=1e-14, Organism=Escherichia coli, GI1788394, Length=228, Percent_Identity=25, Blast_Score=73, Evalue=2e-14, Organism=Escherichia coli, GI2367329, Length=154, Percent_Identity=31.8181818181818, Blast_Score=71, Evalue=7e-14, Organism=Escherichia coli, GI1786784, Length=236, Percent_Identity=22.8813559322034, Blast_Score=68, Evalue=6e-13, Organism=Escherichia coli, GI1786599, Length=133, Percent_Identity=33.8345864661654, Blast_Score=65, Evalue=6e-12, Organism=Escherichia coli, GI87082012, Length=205, Percent_Identity=27.8048780487805, Blast_Score=64, Evalue=9e-12, Organism=Escherichia coli, GI1786911, Length=180, Percent_Identity=27.7777777777778, Blast_Score=64, Evalue=1e-11,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR011006 - InterPro: IPR001867 - InterPro: IPR001789 - InterPro: IPR011991 [H]
Pfam domain/function: PF00072 Response_reg; PF00486 Trans_reg_C [H]
EC number: NA
Molecular weight: Translated: 27746; Mature: 27746
Theoretical pI: Translated: 9.21; Mature: 9.21
Prosite motif: PS50110 RESPONSE_REGULATORY
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.2 %Cys (Translated Protein) 3.2 %Met (Translated Protein) 4.4 %Cys+Met (Translated Protein) 1.2 %Cys (Mature Protein) 3.2 %Met (Mature Protein) 4.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRIALIEPDLRHAEIVGRLLLAGGHACHHFAASAPFLAGAEHEFFDLLVTDAFCGDAAAE CEEEEECCCHHHHHHHHHHHHHCCHHHHHHHHCCCCCCCCCHHHHHHHHHHHHCCCHHHH DVIARARKVLPGLPVVALMSAPRESELVAMLQAGADDCLSKPVRGPEMLARIEALMRRAG HHHHHHHHHCCCCCHHHHHCCCCHHHHHHHHHCCHHHHHHCCCCCHHHHHHHHHHHHHHC IRRPRNRAREMFGEYAFDVGRSSVSFRGQSITMTPKELQFALLLFTNMSRPVSRAHILET CCCHHHHHHHHHHHHHHHHCCCCCEECCCEEEECHHHHHHHHHHHHCCCCHHHHHHHHHH VWSRRRDVRSRTLDTHASRIRTKLELRPEFGYTLTPLYGYGYRLDRIPVENPDTTDKPPP HHHHHHHHHHHHHHHHHHHHHHHHEECCCCCCEECCHHCCCEEECCCCCCCCCCCCCCCC AERIVETL HHHHHHCC >Mature Secondary Structure MRIALIEPDLRHAEIVGRLLLAGGHACHHFAASAPFLAGAEHEFFDLLVTDAFCGDAAAE CEEEEECCCHHHHHHHHHHHHHCCHHHHHHHHCCCCCCCCCHHHHHHHHHHHHCCCHHHH DVIARARKVLPGLPVVALMSAPRESELVAMLQAGADDCLSKPVRGPEMLARIEALMRRAG HHHHHHHHHCCCCCHHHHHCCCCHHHHHHHHHCCHHHHHHCCCCCHHHHHHHHHHHHHHC IRRPRNRAREMFGEYAFDVGRSSVSFRGQSITMTPKELQFALLLFTNMSRPVSRAHILET CCCHHHHHHHHHHHHHHHHCCCCCEECCCEEEECHHHHHHHHHHHHCCCCHHHHHHHHHH VWSRRRDVRSRTLDTHASRIRTKLELRPEFGYTLTPLYGYGYRLDRIPVENPDTTDKPPP HHHHHHHHHHHHHHHHHHHHHHHHEECCCCCCEECCHHCCCEEECCCCCCCCCCCCCCCC AERIVETL HHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 1554697 [H]