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The map label for this gene is visC [H]

Identifier: 186477455

GI number: 186477455

Start: 3060650

End: 3061822

Strand: Reverse

Name: visC [H]

Synonym: Bphy_2707

Alternate gene names: 186477455

Gene position: 3061822-3060650 (Counterclockwise)

Preceding gene: 186477463

Following gene: 186477454

Centisome position: 88.0

GC content: 66.92

Gene sequence:

>1173_bases
ATGAATGCTCACCATCAGTCCTTCGACGTCGCCGTAGTCGGCGGCGGGCTCGTCGGCAAGACGGCGGCGCTCGCGCTCAC
GCAGACCGGGCTGCGCGTCGCGCTGCTCGCGCAGCACTGTCAGCCGCTGCCTGCCGGCGCCGTGTTCGACTCGCGCGTCT
ATGCGCTGTCCGCGAGTTCGCAGGCGTTGCTCGACCGCCTGCGCGTGTGGCAGGCGCTCGATGCATCGCGGCTCGCGCCT
GTGTACGACATGCGCGTCTACGGCGATGCTCACGCAGAACTGCACTTTTCGGCCTTTCAGGCTTCGGTGCCGCAGCTCGC
GTGGATCGCGGAATCGTCGTTGATCGAACATGCGCTCGACGCCGCGCTGCGTTTCCAGCCCAATCTCACGTGGATCGATA
CGCGCGCACAGGGGCTCGATGTGAAGACGGGCGGCGCAACGATCGGTCTTGCGAACGGCAAGGTGCTCGAAGCCGATCTC
GTGGTCGGTGCGGATGGCGCGCATTCGTGGGTGCGTGCGCAGATCGGCTCGAAGGTGACCCGGCGCGACTACCGGCAGAC
AGGCGTCGTGGCGAACTTCAAGGCCGGGCGCCCACACGGCGAAACCGCCTGCCAGTGGTTTCGCGACGGCGAGATCATCG
CGCTGCTGCCGCTGCCGAACGGTCACGTGTCGCTCGTCTGGTCGGCGCTGACCGATCACGCGAATACCCTCGTCAAGCTC
GATCCGGCGCAACTCGCGGCCCAAGTCGAGCGCGTGACGATGGGCGCGCCCGGAACGCTCGAATGCGTGACACCCGCGCA
AGGCTTTCCGCTTGCGCTGCAAACGGTCGACCGGCTGGTCGCGCCGCGCGTCGCGCTGGTCGGCGATGCCGCGCATCTGA
TCCATCCGCTTGCCGGGCAGGGCATGAATCTTGGATTGCGCGACGTGGCGTCACTCGTCGACGTGATCGCGAAAAAAGAG
GCGTTTCGCGATATCGGCGACATGGTGCTGTTGCGCCGCTACGAGCGTTCGCGCAGCGAAGACATCCGTGCGCTGACCGT
CGCCACCGACGGCCTGCAAAAGCTGTTCGGGCTGCCCGGCAATCTCGCGCGGGCTGTCCGCAACACGGGCATGGCGTTCG
TCGGCGCACAGCCGCTAATTAAACGCTGGCTCGTGTCGGCGGCGCTTGGCTGA

Upstream 100 bases:

>100_bases
TGCCGACCGGCATCAAACACCTGCCCAACAAAGCCAGACTACCCCCGAAAGACGGCGGAGCCGATCCGTCCCCGCCACCC
CTCGCGGCTATAATGCCCGG

Downstream 100 bases:

>100_bases
CGCATCGGCGGACGGTGCGCGCCGCGCGTTGAACCGCACGGCGGCGCGCACGTCTGACAGGATGGCACGCAAGGCATACC
ATCTGCGCCAGGCGCGCGGT

Product: ubiquinone biosynthesis hydroxylase family protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 390; Mature: 390

Protein sequence:

>390_residues
MNAHHQSFDVAVVGGGLVGKTAALALTQTGLRVALLAQHCQPLPAGAVFDSRVYALSASSQALLDRLRVWQALDASRLAP
VYDMRVYGDAHAELHFSAFQASVPQLAWIAESSLIEHALDAALRFQPNLTWIDTRAQGLDVKTGGATIGLANGKVLEADL
VVGADGAHSWVRAQIGSKVTRRDYRQTGVVANFKAGRPHGETACQWFRDGEIIALLPLPNGHVSLVWSALTDHANTLVKL
DPAQLAAQVERVTMGAPGTLECVTPAQGFPLALQTVDRLVAPRVALVGDAAHLIHPLAGQGMNLGLRDVASLVDVIAKKE
AFRDIGDMVLLRRYERSRSEDIRALTVATDGLQKLFGLPGNLARAVRNTGMAFVGAQPLIKRWLVSAALG

Sequences:

>Translated_390_residues
MNAHHQSFDVAVVGGGLVGKTAALALTQTGLRVALLAQHCQPLPAGAVFDSRVYALSASSQALLDRLRVWQALDASRLAP
VYDMRVYGDAHAELHFSAFQASVPQLAWIAESSLIEHALDAALRFQPNLTWIDTRAQGLDVKTGGATIGLANGKVLEADL
VVGADGAHSWVRAQIGSKVTRRDYRQTGVVANFKAGRPHGETACQWFRDGEIIALLPLPNGHVSLVWSALTDHANTLVKL
DPAQLAAQVERVTMGAPGTLECVTPAQGFPLALQTVDRLVAPRVALVGDAAHLIHPLAGQGMNLGLRDVASLVDVIAKKE
AFRDIGDMVLLRRYERSRSEDIRALTVATDGLQKLFGLPGNLARAVRNTGMAFVGAQPLIKRWLVSAALG
>Mature_390_residues
MNAHHQSFDVAVVGGGLVGKTAALALTQTGLRVALLAQHCQPLPAGAVFDSRVYALSASSQALLDRLRVWQALDASRLAP
VYDMRVYGDAHAELHFSAFQASVPQLAWIAESSLIEHALDAALRFQPNLTWIDTRAQGLDVKTGGATIGLANGKVLEADL
VVGADGAHSWVRAQIGSKVTRRDYRQTGVVANFKAGRPHGETACQWFRDGEIIALLPLPNGHVSLVWSALTDHANTLVKL
DPAQLAAQVERVTMGAPGTLECVTPAQGFPLALQTVDRLVAPRVALVGDAAHLIHPLAGQGMNLGLRDVASLVDVIAKKE
AFRDIGDMVLLRRYERSRSEDIRALTVATDGLQKLFGLPGNLARAVRNTGMAFVGAQPLIKRWLVSAALG

Specific function: Not yet known [H]

COG id: COG0654

COG function: function code HC; 2-polyprenyl-6-methoxyphenol hydroxylase and related FAD-dependent oxidoreductases

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the ubiH/COQ6 family [H]

Homologues:

Organism=Homo sapiens, GI32967305, Length=387, Percent_Identity=27.906976744186, Blast_Score=121, Evalue=1e-27,
Organism=Homo sapiens, GI32967307, Length=381, Percent_Identity=28.0839895013123, Blast_Score=111, Evalue=1e-24,
Organism=Escherichia coli, GI1789273, Length=390, Percent_Identity=34.6153846153846, Blast_Score=199, Evalue=2e-52,
Organism=Escherichia coli, GI1786883, Length=396, Percent_Identity=34.3434343434343, Blast_Score=176, Evalue=2e-45,
Organism=Escherichia coli, GI1789274, Length=355, Percent_Identity=30.4225352112676, Blast_Score=136, Evalue=3e-33,
Organism=Caenorhabditis elegans, GI25146631, Length=442, Percent_Identity=28.7330316742081, Blast_Score=137, Evalue=8e-33,
Organism=Saccharomyces cerevisiae, GI6321694, Length=292, Percent_Identity=29.4520547945205, Blast_Score=80, Evalue=4e-16,
Organism=Drosophila melanogaster, GI19920760, Length=433, Percent_Identity=29.3302540415704, Blast_Score=134, Evalue=1e-31,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002938
- InterPro:   IPR003042
- InterPro:   IPR018168
- InterPro:   IPR010971 [H]

Pfam domain/function: PF01494 FAD_binding_3 [H]

EC number: 1.-.-.- [C]

Molecular weight: Translated: 41627; Mature: 41627

Theoretical pI: Translated: 8.84; Mature: 8.84

Prosite motif: PS01304 UBIH

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
1.5 %Met     (Translated Protein)
2.3 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
1.5 %Met     (Mature Protein)
2.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNAHHQSFDVAVVGGGLVGKTAALALTQTGLRVALLAQHCQPLPAGAVFDSRVYALSASS
CCCCCCCEEEEEECCCCHHHHHHHHHHHCCHHHHHHHHHCCCCCCCCEECCEEEEECCCH
QALLDRLRVWQALDASRLAPVYDMRVYGDAHAELHFSAFQASVPQLAWIAESSLIEHALD
HHHHHHHHHHHHHCHHHCCCEEEEEEECCCCCEEEHHHHHHCCCHHHHHHHHHHHHHHHH
AALRFQPNLTWIDTRAQGLDVKTGGATIGLANGKVLEADLVVGADGAHSWVRAQIGSKVT
HHHEECCCCEEEECCCCCCEEECCCEEEEECCCCEEEEEEEEECCCCHHHHHHHHCCHHH
RRDYRQTGVVANFKAGRPHGETACQWFRDGEIIALLPLPNGHVSLVWSALTDHANTLVKL
HHHHHHHCCEEEECCCCCCCHHHHHHHCCCCEEEEEECCCCCCEEHHHHHHHCCCEEEEE
DPAQLAAQVERVTMGAPGTLECVTPAQGFPLALQTVDRLVAPRVALVGDAAHLIHPLAGQ
CHHHHHHHHHHHCCCCCCCEEEECCCCCCCHHHHHHHHHHCCCHHEECCHHHHHHHHCCC
GMNLGLRDVASLVDVIAKKEAFRDIGDMVLLRRYERSRSEDIRALTVATDGLQKLFGLPG
CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEEHHHHHHHHCCCH
NLARAVRNTGMAFVGAQPLIKRWLVSAALG
HHHHHHHHCCEEEECCHHHHHHHHHHHHCC
>Mature Secondary Structure
MNAHHQSFDVAVVGGGLVGKTAALALTQTGLRVALLAQHCQPLPAGAVFDSRVYALSASS
CCCCCCCEEEEEECCCCHHHHHHHHHHHCCHHHHHHHHHCCCCCCCCEECCEEEEECCCH
QALLDRLRVWQALDASRLAPVYDMRVYGDAHAELHFSAFQASVPQLAWIAESSLIEHALD
HHHHHHHHHHHHHCHHHCCCEEEEEEECCCCCEEEHHHHHHCCCHHHHHHHHHHHHHHHH
AALRFQPNLTWIDTRAQGLDVKTGGATIGLANGKVLEADLVVGADGAHSWVRAQIGSKVT
HHHEECCCCEEEECCCCCCEEECCCEEEEECCCCEEEEEEEEECCCCHHHHHHHHCCHHH
RRDYRQTGVVANFKAGRPHGETACQWFRDGEIIALLPLPNGHVSLVWSALTDHANTLVKL
HHHHHHHCCEEEECCCCCCCHHHHHHHCCCCEEEEEECCCCCCEEHHHHHHHCCCEEEEE
DPAQLAAQVERVTMGAPGTLECVTPAQGFPLALQTVDRLVAPRVALVGDAAHLIHPLAGQ
CHHHHHHHHHHHCCCCCCCEEEECCCCCCCHHHHHHHHHHCCCHHEECCHHHHHHHHCCC
GMNLGLRDVASLVDVIAKKEAFRDIGDMVLLRRYERSRSEDIRALTVATDGLQKLFGLPG
CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEEHHHHHHHHCCCH
NLARAVRNTGMAFVGAQPLIKRWLVSAALG
HHHHHHHHCCEEEECCHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: Oxidoreductases; Acting on paired donors, with incorporation or reduction of molecular oxygen; With NADH2 or NADPH2 as one donor, and incorporation of one atom of oxygen [C]

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 1339425; 9278503 [H]