| Definition | Burkholderia phymatum STM815 chromosome chromosome 1, complete sequence. |
|---|---|
| Accession | NC_010622 |
| Length | 3,479,187 |
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The map label for this gene is murC [H]
Identifier: 186477420
GI number: 186477420
Start: 3013704
End: 3015098
Strand: Reverse
Name: murC [H]
Synonym: Bphy_2672
Alternate gene names: 186477420
Gene position: 3015098-3013704 (Counterclockwise)
Preceding gene: 186477421
Following gene: 186477419
Centisome position: 86.66
GC content: 64.37
Gene sequence:
>1395_bases ATGAAACATATCGTCAAACACATTCACTTCGTCGGGATCGGCGGCGCGGGCATGAGCGGCATCGCCGAAGTGCTCGTCAA TCTCGGCTATCAGGTGAGCGGATCGGACCTGTCGCGCAACGCGGTGACGGAGCGCCTCGCCGCGCTCGGTGCGCGCATCG CGATCGGCCACGACGCAGCGAACATCGAAGGCGCGAACGCCGTCGTCGTCTCCACGGCCGTGCGCAGCGACAACCCTGAA GTGCTGGCCGCGCGCCATCGCCGCATTCCTATCGTGCCGCGCGCCGTGATGCTTGCGGAACTGATGCGCCTGAAGCAGGG CATCGCGATCGCGGGCACGCACGGCAAGACCACGACCACCTCGCTGGTGGCGAGCGTGCTGGCGGCGGGCGGTCTCGATC CGACCTTCGTGATCGGCGGCCGGCTGATCAGCGCCGGCGCGAATGCGCGTCTCGGCACGGGCGATTTCATCGTCGCCGAA GCGGACGAATCCGATGCGTCGTTCCTGAACCTGTTTCCGGTGATCGAAGTCATCACGAACATCGACGCCGATCACATGGA CACCTACGGCCACGACTTCGCGCGGCTGAAGCAGGCGTTCATTGAATTTACGCATCGTCTGCCGTTTTATGGCATTGCGG TGCTGTGCGTCGACGATCCGAACGTGAAGGAGATTCTGCCGTTCGTGTCGAAGCCGATCATCCGCTACGGCTTCGCGCCC GATGCGCAGGTGCGCGCGGTGAACGTCGAAGCGCGCGAAGGCAAGATGCATTTCACGGCGATGCGCGAGGATGCGCCGCC CATCGACATCGTGTTGAACCTGCCGGGTCTGCACAACGTGCAGAACGCGCTCGCCGCGATTGCGATTGCGACTGAACTTG AGGTGAAAGATGCCGATATCCAGCGAGCGCTCGCGGATTTCAACGGCGTCGGCCGGCGTTTTCAGCGTTACGGGGAAGTG ACCGTGACGAGCGGCGGCGCGTACACGCTCGTCGACGACTACGGCCATCACCCGGTCGAAATGGCGGCGACGATTGCGGC GGCGCGCGGTGCATTTCCGGACAAGCGTCTCGTGCTCGCGTTCCAGCCTCACCGGTTCACGCGCACGCGCGACTGCTTCG AAGATTTCGTGAAGGTGCTGTCGACGGTCGACGCGCTCGTGCTGACGGAAGTCTATTCGGCGGGCGAAGCGCCCATCGTC GCGGCGGACGGCCGTTCGCTCACGCGCGCGATCCGCGTGGCGGGCAAGGTGGAGCCGGTGTTTGTCGACACAGTGGATGA AGTGCCGGATGCGCTCGGTGCAATCGTGCGCGACGGCGATGTGGTGATCACGATGGGTGCGGGTTCGATCGGGAGTGTGC CGGGTCGGCTCGCAGGAAACGAAGGTGTGAAATGA
Upstream 100 bases:
>100_bases CGCGCTCGCTCGCGAAACCCGACGCCACCGAACAGGTCGCACAAATCTGCGCAACGGTGGCGGGCGTGACCCCGAGCCTG AGCCCGGAAGGAAAGCAGCA
Downstream 100 bases:
>100_bases GCGGTATCGATCCTAAATCTTTCGGCAAGGTTGCCGTGCTGCTCGGCGGTGCGTCCGCCGAGCGCGAAGTGTCGCTGAAC TCCGGCCGTCTCGTGCTGCA
Product: UDP-N-acetylmuramate--L-alanine ligase
Products: NA
Alternate protein names: UDP-N-acetylmuramoyl-L-alanine synthetase [H]
Number of amino acids: Translated: 464; Mature: 464
Protein sequence:
>464_residues MKHIVKHIHFVGIGGAGMSGIAEVLVNLGYQVSGSDLSRNAVTERLAALGARIAIGHDAANIEGANAVVVSTAVRSDNPE VLAARHRRIPIVPRAVMLAELMRLKQGIAIAGTHGKTTTTSLVASVLAAGGLDPTFVIGGRLISAGANARLGTGDFIVAE ADESDASFLNLFPVIEVITNIDADHMDTYGHDFARLKQAFIEFTHRLPFYGIAVLCVDDPNVKEILPFVSKPIIRYGFAP DAQVRAVNVEAREGKMHFTAMREDAPPIDIVLNLPGLHNVQNALAAIAIATELEVKDADIQRALADFNGVGRRFQRYGEV TVTSGGAYTLVDDYGHHPVEMAATIAAARGAFPDKRLVLAFQPHRFTRTRDCFEDFVKVLSTVDALVLTEVYSAGEAPIV AADGRSLTRAIRVAGKVEPVFVDTVDEVPDALGAIVRDGDVVITMGAGSIGSVPGRLAGNEGVK
Sequences:
>Translated_464_residues MKHIVKHIHFVGIGGAGMSGIAEVLVNLGYQVSGSDLSRNAVTERLAALGARIAIGHDAANIEGANAVVVSTAVRSDNPE VLAARHRRIPIVPRAVMLAELMRLKQGIAIAGTHGKTTTTSLVASVLAAGGLDPTFVIGGRLISAGANARLGTGDFIVAE ADESDASFLNLFPVIEVITNIDADHMDTYGHDFARLKQAFIEFTHRLPFYGIAVLCVDDPNVKEILPFVSKPIIRYGFAP DAQVRAVNVEAREGKMHFTAMREDAPPIDIVLNLPGLHNVQNALAAIAIATELEVKDADIQRALADFNGVGRRFQRYGEV TVTSGGAYTLVDDYGHHPVEMAATIAAARGAFPDKRLVLAFQPHRFTRTRDCFEDFVKVLSTVDALVLTEVYSAGEAPIV AADGRSLTRAIRVAGKVEPVFVDTVDEVPDALGAIVRDGDVVITMGAGSIGSVPGRLAGNEGVK >Mature_464_residues MKHIVKHIHFVGIGGAGMSGIAEVLVNLGYQVSGSDLSRNAVTERLAALGARIAIGHDAANIEGANAVVVSTAVRSDNPE VLAARHRRIPIVPRAVMLAELMRLKQGIAIAGTHGKTTTTSLVASVLAAGGLDPTFVIGGRLISAGANARLGTGDFIVAE ADESDASFLNLFPVIEVITNIDADHMDTYGHDFARLKQAFIEFTHRLPFYGIAVLCVDDPNVKEILPFVSKPIIRYGFAP DAQVRAVNVEAREGKMHFTAMREDAPPIDIVLNLPGLHNVQNALAAIAIATELEVKDADIQRALADFNGVGRRFQRYGEV TVTSGGAYTLVDDYGHHPVEMAATIAAARGAFPDKRLVLAFQPHRFTRTRDCFEDFVKVLSTVDALVLTEVYSAGEAPIV AADGRSLTRAIRVAGKVEPVFVDTVDEVPDALGAIVRDGDVVITMGAGSIGSVPGRLAGNEGVK
Specific function: Cell wall formation [H]
COG id: COG0773
COG function: function code M; UDP-N-acetylmuramate-alanine ligase
Gene ontology:
Cell location: Cytoplasm [H]
Metaboloic importance: Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the MurCDEF family [H]
Homologues:
Organism=Escherichia coli, GI1786279, Length=458, Percent_Identity=55.4585152838428, Blast_Score=457, Evalue=1e-130, Organism=Escherichia coli, GI1790680, Length=466, Percent_Identity=27.8969957081545, Blast_Score=154, Evalue=1e-38,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR004101 - InterPro: IPR013221 - InterPro: IPR000713 - InterPro: IPR016040 - InterPro: IPR005758 [H]
Pfam domain/function: PF01225 Mur_ligase; PF02875 Mur_ligase_C; PF08245 Mur_ligase_M [H]
EC number: =6.3.2.8 [H]
Molecular weight: Translated: 49246; Mature: 49246
Theoretical pI: Translated: 6.16; Mature: 6.16
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.4 %Cys (Translated Protein) 1.9 %Met (Translated Protein) 2.4 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 1.9 %Met (Mature Protein) 2.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKHIVKHIHFVGIGGAGMSGIAEVLVNLGYQVSGSDLSRNAVTERLAALGARIAIGHDAA CCCHHCEEEEEEECCCCHHHHHHHHHHCCCEECCCCCHHHHHHHHHHHHCCEEEECCCCC NIEGANAVVVSTAVRSDNPEVLAARHRRIPIVPRAVMLAELMRLKQGIAIAGTHGKTTTT CCCCCCEEEEEEEECCCCCHHHHHHCCCCCCCHHHHHHHHHHHHHCCCEEEECCCCCHHH SLVASVLAAGGLDPTFVIGGRLISAGANARLGTGDFIVAEADESDASFLNLFPVIEVITN HHHHHHHHHCCCCCEEEECCEEEECCCCCCCCCCCEEEEECCCCCCHHHHHHHHHHHHHC IDADHMDTYGHDFARLKQAFIEFTHRLPFYGIAVLCVDDPNVKEILPFVSKPIIRYGFAP CCCHHHHHCCHHHHHHHHHHHHHHHCCCCEEEEEEEECCCCHHHHHHHHHCCHHHCCCCC DAQVRAVNVEAREGKMHFTAMREDAPPIDIVLNLPGLHNVQNALAAIAIATELEVKDADI CCEEEEEEEEECCCCEEEEEECCCCCCEEEEEECCCCHHHHHHHHHHHHHEECEECHHHH QRALADFNGVGRRFQRYGEVTVTSGGAYTLVDDYGHHPVEMAATIAAARGAFPDKRLVLA HHHHHHHHHHHHHHHHCCCEEEECCCEEEEECCCCCCHHHHHHHHHHHHCCCCCCEEEEE FQPHRFTRTRDCFEDFVKVLSTVDALVLTEVYSAGEAPIVAADGRSLTRAIRVAGKVEPV ECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEECCHHHHHHHHHHCCCCEE FVDTVDEVPDALGAIVRDGDVVITMGAGSIGSVPGRLAGNEGVK EECCHHHHHHHHHHHEECCCEEEEECCCCCCCCCCCCCCCCCCC >Mature Secondary Structure MKHIVKHIHFVGIGGAGMSGIAEVLVNLGYQVSGSDLSRNAVTERLAALGARIAIGHDAA CCCHHCEEEEEEECCCCHHHHHHHHHHCCCEECCCCCHHHHHHHHHHHHCCEEEECCCCC NIEGANAVVVSTAVRSDNPEVLAARHRRIPIVPRAVMLAELMRLKQGIAIAGTHGKTTTT CCCCCCEEEEEEEECCCCCHHHHHHCCCCCCCHHHHHHHHHHHHHCCCEEEECCCCCHHH SLVASVLAAGGLDPTFVIGGRLISAGANARLGTGDFIVAEADESDASFLNLFPVIEVITN HHHHHHHHHCCCCCEEEECCEEEECCCCCCCCCCCEEEEECCCCCCHHHHHHHHHHHHHC IDADHMDTYGHDFARLKQAFIEFTHRLPFYGIAVLCVDDPNVKEILPFVSKPIIRYGFAP CCCHHHHHCCHHHHHHHHHHHHHHHCCCCEEEEEEEECCCCHHHHHHHHHCCHHHCCCCC DAQVRAVNVEAREGKMHFTAMREDAPPIDIVLNLPGLHNVQNALAAIAIATELEVKDADI CCEEEEEEEEECCCCEEEEEECCCCCCEEEEEECCCCHHHHHHHHHHHHHEECEECHHHH QRALADFNGVGRRFQRYGEVTVTSGGAYTLVDDYGHHPVEMAATIAAARGAFPDKRLVLA HHHHHHHHHHHHHHHHCCCEEEECCCEEEEECCCCCCHHHHHHHHHHHHCCCCCCEEEEE FQPHRFTRTRDCFEDFVKVLSTVDALVLTEVYSAGEAPIVAADGRSLTRAIRVAGKVEPV ECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEECCHHHHHHHHHHCCCCEE FVDTVDEVPDALGAIVRDGDVVITMGAGSIGSVPGRLAGNEGVK EECCHHHHHHHHHHHEECCCEEEEECCCCCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA