| Definition | Burkholderia phymatum STM815 chromosome chromosome 1, complete sequence. |
|---|---|
| Accession | NC_010622 |
| Length | 3,479,187 |
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The map label for this gene is 186477413
Identifier: 186477413
GI number: 186477413
Start: 3006859
End: 3007401
Strand: Direct
Name: 186477413
Synonym: Bphy_2665
Alternate gene names: NA
Gene position: 3006859-3007401 (Clockwise)
Preceding gene: 186477408
Following gene: 186477432
Centisome position: 86.42
GC content: 66.3
Gene sequence:
>543_bases ATGAGGCACGCGGCGCGCGTGTCGCGAACAAAGTCCCAGATGAGCCGTTTTTCACCGTTTTCAAGGCAATCGCTGAAACC GGGCCCGAAGCTGGGCTCCCGGTCGTTCGACGTACGCCGGCCACAGGCCGTTGCCGAAGTCCTGAATCGTACCGACGCGT TCGCCGCGCTGCGCGCCGGCGTCGAGCAGATTGCCGCGCTGGAACGCGATCTCACCGAACTGCTGCCCGATTATCTGGCG ACGAGCGTCGAGCCCGGCTTCATCAAGGACGGCGTGCTCGCGCTGTTCGCCGCCCACAATGCGCTCGCTGCGCGGTTGCG GCATCTGGAGCCACGTTTGCTGTCGGAACTGCAGCAGCGCGGCTGGCCGGTCAATTCCTTGCGGATTCGCGTGCGTCCGC AGCCGGCGAAAGAACCGGCGCGTGCAAAAGAGGCGCGCATGTCGCGCGTCGGCGCCGATGCACTGCACGCACTCAGCGAA TCGCTCGAGCCTTCGCCGCTGCAAGCCGCATTGGCGCGCATGGCGGCTCGCCATCGGAAGTGA
Upstream 100 bases:
>100_bases TCCGGCCAGGGCCGAAGCGCTGCCGCTGCTGCCGTCCGGCACGCCGCAAAACGGCGTTGAGCGCCCGTGCCACACGGTAC GCACACGGTACAATCTCGGC
Downstream 100 bases:
>100_bases AGCCTCATAGCACGGGTGCACCACATGAAAAAGCGGCCCGTACAGGCCGCTTTTCGTTGCTGCTCGATATGGCGCCGAAG CGCACGCTTTACGCGAACGC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 180; Mature: 180
Protein sequence:
>180_residues MRHAARVSRTKSQMSRFSPFSRQSLKPGPKLGSRSFDVRRPQAVAEVLNRTDAFAALRAGVEQIAALERDLTELLPDYLA TSVEPGFIKDGVLALFAAHNALAARLRHLEPRLLSELQQRGWPVNSLRIRVRPQPAKEPARAKEARMSRVGADALHALSE SLEPSPLQAALARMAARHRK
Sequences:
>Translated_180_residues MRHAARVSRTKSQMSRFSPFSRQSLKPGPKLGSRSFDVRRPQAVAEVLNRTDAFAALRAGVEQIAALERDLTELLPDYLA TSVEPGFIKDGVLALFAAHNALAARLRHLEPRLLSELQQRGWPVNSLRIRVRPQPAKEPARAKEARMSRVGADALHALSE SLEPSPLQAALARMAARHRK >Mature_180_residues MRHAARVSRTKSQMSRFSPFSRQSLKPGPKLGSRSFDVRRPQAVAEVLNRTDAFAALRAGVEQIAALERDLTELLPDYLA TSVEPGFIKDGVLALFAAHNALAARLRHLEPRLLSELQQRGWPVNSLRIRVRPQPAKEPARAKEARMSRVGADALHALSE SLEPSPLQAALARMAARHRK
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 19952; Mature: 19952
Theoretical pI: Translated: 11.97; Mature: 11.97
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 2.2 %Met (Translated Protein) 2.2 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 2.2 %Met (Mature Protein) 2.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRHAARVSRTKSQMSRFSPFSRQSLKPGPKLGSRSFDVRRPQAVAEVLNRTDAFAALRAG CCCHHHHHHHHHHHHHCCCCHHHCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHH VEQIAALERDLTELLPDYLATSVEPGFIKDGVLALFAAHNALAARLRHLEPRLLSELQQR HHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHC GWPVNSLRIRVRPQPAKEPARAKEARMSRVGADALHALSESLEPSPLQAALARMAARHRK CCCCCCEEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHCCC >Mature Secondary Structure MRHAARVSRTKSQMSRFSPFSRQSLKPGPKLGSRSFDVRRPQAVAEVLNRTDAFAALRAG CCCHHHHHHHHHHHHHCCCCHHHCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHH VEQIAALERDLTELLPDYLATSVEPGFIKDGVLALFAAHNALAARLRHLEPRLLSELQQR HHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHC GWPVNSLRIRVRPQPAKEPARAKEARMSRVGADALHALSESLEPSPLQAALARMAARHRK CCCCCCEEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA