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The map label for this gene is 186477432

Identifier: 186477432

GI number: 186477432

Start: 3028136

End: 3029344

Strand: Direct

Name: 186477432

Synonym: Bphy_2684

Alternate gene names: NA

Gene position: 3028136-3029344 (Clockwise)

Preceding gene: 186477413

Following gene: 186477435

Centisome position: 87.04

GC content: 61.12

Gene sequence:

>1209_bases
ATGAAAAAGTCGCTTCTCGCTCTTGCAGCATTGGGCGCGTTTGCTGGCGTCGCTCACGCACAGAGCAGCGTGACGTTGTA
CGGCATTATTGATGAAGGTTTTAACTACACGAGCAACGTGCAGACGGCGGCAGGCGCCGGACGTACCGGTAACCATCTGT
ACAACCTGTCGAGCGGCGTGATGCAGGGCAGCCGTTGGGGCCTCCGCGGCGCTGAAGACCTGGGCGGCGGCCTGAAGGCT
GTCTTCGTGCTGGAAAGCGGATTCGACGTGAACAGCGGCAAATCCGGTCAAGGCGGCTCGCTGTTCGGTCGTCAGGCTTA
TGTCGGTCTGTCGAGCCAGTTCGGTACGGTGACGCTCGGTCGCCAATATGACTCCGTGGTCGACTTTGTCGGTCCGCTGG
AAGCCGGCGACCAGTGGGGCGGCTACATCGCGGCTCACCCGGACGATCTGGACAACTTCAACAACGCCAACCGGGTGAAC
AACGCGATCAAGTACACGAGCGCAAACTACGCCGGCCTGACGTTCGGCGGTATGTATAGCCTCGGTGGCGTCGCGGGCGC
AACGGGCCGCAACCAGATCTGGTCGTTGGGCGCTGGCTATAATAACGGCCCGCTCGTGTTGGGCGCAGGCTATTTGAACG
TCCGCGATCCGAACCAATCGTTCTGGGGCAATACGCCGAGCGGCTTGGCTAACCCGAACAACAACATCGGCAGGACGACG
GTGACGGGCGTCCAGGGTAACCCGGTCATCTCGGGCTTCGCTTCGGCAAGTTCGTACCAGGTCGGTGGCGCGGGCGGCGC
ATACACGTTCGGCGCTGCGACGGTCGGCCTGACGTATTCGTTCATCCAGTTCGGTAATCTGGGTGCAGCCAACGTCACCG
CTCCGGCATACAAGGGCACGGCGACGTTTAACAATGGCGAAATCAACTTCAAGTATCAGTTGACGCCGGCTCTCGTGCTG
GGCGCTGCGTACGACTACACGCGCCTCGCCGACTTCAACGGTCACGGTGGTGCGCACTACAACCAGGGCGCACTGGGTGC
GGACTACTTCCTGTCGAAGCGCACGGACGTCTATCTGATCGGCGTGTACCAGCACGCTTCCGGTACGGACTCGACGGGTC
AGTCGGCCGTTGCTTCGATCAACGGCCTGACGCCGTCGAACTCGAACAACCAGACCACGGTTCGTGTCGGTATCCGTCAC
AAGTTCTAA

Upstream 100 bases:

>100_bases
ACATTACGTGGCAACTTCCTGACGAAGTTATGCAAGGTCGCAACATAGATAACTACTTGCCTTGTTTGAAAATAATTTGC
AAATCCTTGGAGATCTTTCG

Downstream 100 bases:

>100_bases
TAAGTTGTGAAAGCGTAGTAACCCTCGAGGGCGTCTTCGGACGCCCTTTTTTATTGGTGCGTCGCCGCGGTGCGTCGATA
CCCGCACAAAGAATACGGCC

Product: porin

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 402; Mature: 402

Protein sequence:

>402_residues
MKKSLLALAALGAFAGVAHAQSSVTLYGIIDEGFNYTSNVQTAAGAGRTGNHLYNLSSGVMQGSRWGLRGAEDLGGGLKA
VFVLESGFDVNSGKSGQGGSLFGRQAYVGLSSQFGTVTLGRQYDSVVDFVGPLEAGDQWGGYIAAHPDDLDNFNNANRVN
NAIKYTSANYAGLTFGGMYSLGGVAGATGRNQIWSLGAGYNNGPLVLGAGYLNVRDPNQSFWGNTPSGLANPNNNIGRTT
VTGVQGNPVISGFASASSYQVGGAGGAYTFGAATVGLTYSFIQFGNLGAANVTAPAYKGTATFNNGEINFKYQLTPALVL
GAAYDYTRLADFNGHGGAHYNQGALGADYFLSKRTDVYLIGVYQHASGTDSTGQSAVASINGLTPSNSNNQTTVRVGIRH
KF

Sequences:

>Translated_402_residues
MKKSLLALAALGAFAGVAHAQSSVTLYGIIDEGFNYTSNVQTAAGAGRTGNHLYNLSSGVMQGSRWGLRGAEDLGGGLKA
VFVLESGFDVNSGKSGQGGSLFGRQAYVGLSSQFGTVTLGRQYDSVVDFVGPLEAGDQWGGYIAAHPDDLDNFNNANRVN
NAIKYTSANYAGLTFGGMYSLGGVAGATGRNQIWSLGAGYNNGPLVLGAGYLNVRDPNQSFWGNTPSGLANPNNNIGRTT
VTGVQGNPVISGFASASSYQVGGAGGAYTFGAATVGLTYSFIQFGNLGAANVTAPAYKGTATFNNGEINFKYQLTPALVL
GAAYDYTRLADFNGHGGAHYNQGALGADYFLSKRTDVYLIGVYQHASGTDSTGQSAVASINGLTPSNSNNQTTVRVGIRH
KF
>Mature_402_residues
MKKSLLALAALGAFAGVAHAQSSVTLYGIIDEGFNYTSNVQTAAGAGRTGNHLYNLSSGVMQGSRWGLRGAEDLGGGLKA
VFVLESGFDVNSGKSGQGGSLFGRQAYVGLSSQFGTVTLGRQYDSVVDFVGPLEAGDQWGGYIAAHPDDLDNFNNANRVN
NAIKYTSANYAGLTFGGMYSLGGVAGATGRNQIWSLGAGYNNGPLVLGAGYLNVRDPNQSFWGNTPSGLANPNNNIGRTT
VTGVQGNPVISGFASASSYQVGGAGGAYTFGAATVGLTYSFIQFGNLGAANVTAPAYKGTATFNNGEINFKYQLTPALVL
GAAYDYTRLADFNGHGGAHYNQGALGADYFLSKRTDVYLIGVYQHASGTDSTGQSAVASINGLTPSNSNNQTTVRVGIRH
KF

Specific function: Forms anion selective channels [H]

COG id: COG3203

COG function: function code M; Outer membrane protein (porin)

Gene ontology:

Cell location: Cell outer membrane; Multi-pass membrane protein [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: To bacterial outer membrane proteins and porins [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001702
- InterPro:   IPR002299 [H]

Pfam domain/function: PF00267 Porin_1 [H]

EC number: NA

Molecular weight: Translated: 41548; Mature: 41548

Theoretical pI: Translated: 8.89; Mature: 8.89

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
0.7 %Met     (Translated Protein)
0.7 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
0.7 %Met     (Mature Protein)
0.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKKSLLALAALGAFAGVAHAQSSVTLYGIIDEGFNYTSNVQTAAGAGRTGNHLYNLSSGV
CCCHHHHHHHHHHHHHHHHCCCCEEEEEEEECCCCCCCCCCHHCCCCCCCCEEEECCHHH
MQGSRWGLRGAEDLGGGLKAVFVLESGFDVNSGKSGQGGSLFGRQAYVGLSSQFGTVTLG
CCCCCCCCCCHHHHCCCEEEEEEEECCCCCCCCCCCCCCCEECCEEEEECCCCCCEEEEC
RQYDSVVDFVGPLEAGDQWGGYIAAHPDDLDNFNNANRVNNAIKYTSANYAGLTFGGMYS
CCHHHHHHHHCCCCCCCCCCCEEEECCCCCCCCCCCHHHCCEEEEECCCCCCEEECCHHH
LGGVAGATGRNQIWSLGAGYNNGPLVLGAGYLNVRDPNQSFWGNTPSGLANPNNNIGRTT
CCCCCCCCCCCCEEEECCCCCCCCEEEEEEEEEEECCCCCCCCCCCCCCCCCCCCCCCEE
VTGVQGNPVISGFASASSYQVGGAGGAYTFGAATVGLTYSFIQFGNLGAANVTAPAYKGT
EECCCCCCEEEECCCCCCEEECCCCCCEEECHHHHHHEEEEHCCCCCCCCCCCCCCCCCC
ATFNNGEINFKYQLTPALVLGAAYDYTRLADFNGHGGAHYNQGALGADYFLSKRTDVYLI
EEECCCEEEEEEEECCEEEEECCCCCEEEECCCCCCCCCCCCCCCCHHHHHCCCCCEEEE
GVYQHASGTDSTGQSAVASINGLTPSNSNNQTTVRVGIRHKF
EEEEECCCCCCCCCHHHHEECCCCCCCCCCEEEEEEEEEECC
>Mature Secondary Structure
MKKSLLALAALGAFAGVAHAQSSVTLYGIIDEGFNYTSNVQTAAGAGRTGNHLYNLSSGV
CCCHHHHHHHHHHHHHHHHCCCCEEEEEEEECCCCCCCCCCHHCCCCCCCCEEEECCHHH
MQGSRWGLRGAEDLGGGLKAVFVLESGFDVNSGKSGQGGSLFGRQAYVGLSSQFGTVTLG
CCCCCCCCCCHHHHCCCEEEEEEEECCCCCCCCCCCCCCCEECCEEEEECCCCCCEEEEC
RQYDSVVDFVGPLEAGDQWGGYIAAHPDDLDNFNNANRVNNAIKYTSANYAGLTFGGMYS
CCHHHHHHHHCCCCCCCCCCCEEEECCCCCCCCCCCHHHCCEEEEECCCCCCEEECCHHH
LGGVAGATGRNQIWSLGAGYNNGPLVLGAGYLNVRDPNQSFWGNTPSGLANPNNNIGRTT
CCCCCCCCCCCCEEEECCCCCCCCEEEEEEEEEEECCCCCCCCCCCCCCCCCCCCCCCEE
VTGVQGNPVISGFASASSYQVGGAGGAYTFGAATVGLTYSFIQFGNLGAANVTAPAYKGT
EECCCCCCEEEECCCCCCEEECCCCCCEEECHHHHHHEEEEHCCCCCCCCCCCCCCCCCC
ATFNNGEINFKYQLTPALVLGAAYDYTRLADFNGHGGAHYNQGALGADYFLSKRTDVYLI
EEECCCEEEEEEEECCEEEEECCCCCEEEECCCCCCCCCCCCCCCCHHHHHCCCCCEEEE
GVYQHASGTDSTGQSAVASINGLTPSNSNNQTTVRVGIRHKF
EEEEECCCCCCCCCHHHHEECCCCCCCCCCEEEEEEEEEECC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 1658537; 12910271 [H]