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The map label for this gene is tapC [H]

Identifier: 186477404

GI number: 186477404

Start: 2996967

End: 2998190

Strand: Direct

Name: tapC [H]

Synonym: Bphy_2656

Alternate gene names: 186477404

Gene position: 2996967-2998190 (Clockwise)

Preceding gene: 186477403

Following gene: 186477405

Centisome position: 86.14

GC content: 66.83

Gene sequence:

>1224_bases
ATGACCCGCGCGTCGATCAGCAGCGAACAGCGCTTCGAGTGGCGCGCATTCGACACACATGGCGTACGCCGTCGCGGAAC
CGTGATCGCACCCGATCTCTCCGCGGCGCGCGCAATGCTCAAGCAGGACGCGCTCTATGCCGTCGAATGGATCGCACGGG
GTGCTGCGCCTCCACCCGCTGCGCGCGCCGCCGACGTCACGCTATTCACCCGTCAGTTATCGGGATTGCTGCGAGCAGGA
TTGCCGCTTGCGTCTGCGCTGGAGCTACTGGCGCAGGCATCGAAGCACAACGCGCGAACCAAGGGCATGCCGCGCATCGT
GCGCGCGCTCGCCCGCGACATAACGGCAGGCGTCAGTTTTTCGTCGGCGCTTGCACGCCATCCCGCGCAGTTCAACGCGC
TCTACTGTCAGCTGGTCGAGGTAGGCGAAGCATCCGGCACGCTGCCGGCCGTCCTTGCAAGGCTCGCCGACGACCGGGAA
CGCGCCGCTGCCCAGCGTGCCAAGGTTCGCGCCGCGCTTACCTATCCCGTCGCGGTTCTGCTGCTCGCGCTCTCGATCAC
GACCGCGCTGCTCGTATGGGTCGTGCCGACGTTCAAGCAGATTTTCGACGGGTTCGGCGCAAAGCTGCCCGCGCCGACGC
AGTTCGTTCTGGCGATGTCGGCTGCGGCGGGCCGCTGGAGCGTGCCGCTCGCAGCGATCACCTCGCTGGTTGTGTTCGCG
ACGCGCCACGCGCTACGACGCTCGGAAGCGGCACGTCTGCACTTCGCGCGCATAACGCTGCGGCTGCCGTTTGCCGGTCC
GCTGCTCGCTACGTTATGCGCCGCGCGCTGGAGCCGCGCGCTTGGCACGCTGCTGTCGGCAGGGACGCCACTCGCCGATG
CATTCGATTCGCTCACGCACGCCACGGGGAACGCATGGTTCGATCGCGCCACGGTCGCGATCTCGGCGCAGCTCCGGCGT
GGCGTGCGGCTCGCGCCCGCCATGCGCGAAGCGCAATGCTTTCCCGAAGAGATCGTGCAACCCGTCGCCGTCGCCGAAGA
ATCGGGCACGCTTGATACGATGCTGCTCGATGTCGCGTCGCTGAGCGATCGTCAGGTAGACGAAAAGATCGCGGGCCTGG
CCAGCCTGTGCGAGCCGCTCGTGATCGTCGTGCTCGGCGTGCTCGTCGGCGGTCTTGTCGTCGCGATGTATCTTCCCATT
ATCCAACTCGGCAACGTGGTGTAG

Upstream 100 bases:

>100_bases
CGCAGGCCGAACGCGTGCAGACATTGCGCGAAGCCGCGCTCGCCCGTGCTTTCGACGGCACGACGAGTCTGGCCGAAGCA
TCGAGCGCAACGGAGGTTGC

Downstream 100 bases:

>100_bases
TAGCATCGCAGCCGAATCCCGACAATCGATCATGCCGATCCCGCTCACGTCCGTACCCGAACCCTCCCTTAGCGGCCCGC
TCGCCCGTTTCGCGGACAAC

Product: type II secretion system protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 407; Mature: 406

Protein sequence:

>407_residues
MTRASISSEQRFEWRAFDTHGVRRRGTVIAPDLSAARAMLKQDALYAVEWIARGAAPPPAARAADVTLFTRQLSGLLRAG
LPLASALELLAQASKHNARTKGMPRIVRALARDITAGVSFSSALARHPAQFNALYCQLVEVGEASGTLPAVLARLADDRE
RAAAQRAKVRAALTYPVAVLLLALSITTALLVWVVPTFKQIFDGFGAKLPAPTQFVLAMSAAAGRWSVPLAAITSLVVFA
TRHALRRSEAARLHFARITLRLPFAGPLLATLCAARWSRALGTLLSAGTPLADAFDSLTHATGNAWFDRATVAISAQLRR
GVRLAPAMREAQCFPEEIVQPVAVAEESGTLDTMLLDVASLSDRQVDEKIAGLASLCEPLVIVVLGVLVGGLVVAMYLPI
IQLGNVV

Sequences:

>Translated_407_residues
MTRASISSEQRFEWRAFDTHGVRRRGTVIAPDLSAARAMLKQDALYAVEWIARGAAPPPAARAADVTLFTRQLSGLLRAG
LPLASALELLAQASKHNARTKGMPRIVRALARDITAGVSFSSALARHPAQFNALYCQLVEVGEASGTLPAVLARLADDRE
RAAAQRAKVRAALTYPVAVLLLALSITTALLVWVVPTFKQIFDGFGAKLPAPTQFVLAMSAAAGRWSVPLAAITSLVVFA
TRHALRRSEAARLHFARITLRLPFAGPLLATLCAARWSRALGTLLSAGTPLADAFDSLTHATGNAWFDRATVAISAQLRR
GVRLAPAMREAQCFPEEIVQPVAVAEESGTLDTMLLDVASLSDRQVDEKIAGLASLCEPLVIVVLGVLVGGLVVAMYLPI
IQLGNVV
>Mature_406_residues
TRASISSEQRFEWRAFDTHGVRRRGTVIAPDLSAARAMLKQDALYAVEWIARGAAPPPAARAADVTLFTRQLSGLLRAGL
PLASALELLAQASKHNARTKGMPRIVRALARDITAGVSFSSALARHPAQFNALYCQLVEVGEASGTLPAVLARLADDRER
AAAQRAKVRAALTYPVAVLLLALSITTALLVWVVPTFKQIFDGFGAKLPAPTQFVLAMSAAAGRWSVPLAAITSLVVFAT
RHALRRSEAARLHFARITLRLPFAGPLLATLCAARWSRALGTLLSAGTPLADAFDSLTHATGNAWFDRATVAISAQLRRG
VRLAPAMREAQCFPEEIVQPVAVAEESGTLDTMLLDVASLSDRQVDEKIAGLASLCEPLVIVVLGVLVGGLVVAMYLPII
QLGNVV

Specific function: Involved in the translocation of the type IV pilin [H]

COG id: COG1459

COG function: function code NU; Type II secretory pathway, component PulF

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein (Probable) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the GSP F family [H]

Homologues:

Organism=Escherichia coli, GI1789724, Length=401, Percent_Identity=29.426433915212, Blast_Score=163, Evalue=2e-41,
Organism=Escherichia coli, GI1786295, Length=402, Percent_Identity=28.1094527363184, Blast_Score=135, Evalue=5e-33,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003004
- InterPro:   IPR018076
- InterPro:   IPR001992 [H]

Pfam domain/function: PF00482 GSPII_F [H]

EC number: NA

Molecular weight: Translated: 43357; Mature: 43226

Theoretical pI: Translated: 10.87; Mature: 10.87

Prosite motif: PS00874 T2SP_F

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.0 %Cys     (Translated Protein)
1.7 %Met     (Translated Protein)
2.7 %Cys+Met (Translated Protein)
1.0 %Cys     (Mature Protein)
1.5 %Met     (Mature Protein)
2.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTRASISSEQRFEWRAFDTHGVRRRGTVIAPDLSAARAMLKQDALYAVEWIARGAAPPPA
CCCCCCCCCCCCEEEECCCCCCCCCCCEECCCHHHHHHHHHHHHHHHHHHHHCCCCCCCC
ARAADVTLFTRQLSGLLRAGLPLASALELLAQASKHNARTKGMPRIVRALARDITAGVSF
CCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHCCHH
SSALARHPAQFNALYCQLVEVGEASGTLPAVLARLADDRERAAAQRAKVRAALTYPVAVL
HHHHHHCCHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LLALSITTALLVWVVPTFKQIFDGFGAKLPAPTQFVLAMSAAAGRWSVPLAAITSLVVFA
HHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHCCCCCCCCHHHHHHHHHHH
TRHALRRSEAARLHFARITLRLPFAGPLLATLCAARWSRALGTLLSAGTPLADAFDSLTH
HHHHHHHHHHHHHEEEEEEEECCCCHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHH
ATGNAWFDRATVAISAQLRRGVRLAPAMREAQCFPEEIVQPVAVAEESGTLDTMLLDVAS
HCCCHHHHHHHHHHHHHHHCCCHHHHHHHHHHCCHHHHHHHHHHHCCCCCHHHHHHHHHH
LSDRQVDEKIAGLASLCEPLVIVVLGVLVGGLVVAMYLPIIQLGNVV
HCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC
>Mature Secondary Structure 
TRASISSEQRFEWRAFDTHGVRRRGTVIAPDLSAARAMLKQDALYAVEWIARGAAPPPA
CCCCCCCCCCCEEEECCCCCCCCCCCEECCCHHHHHHHHHHHHHHHHHHHHCCCCCCCC
ARAADVTLFTRQLSGLLRAGLPLASALELLAQASKHNARTKGMPRIVRALARDITAGVSF
CCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHCCHH
SSALARHPAQFNALYCQLVEVGEASGTLPAVLARLADDRERAAAQRAKVRAALTYPVAVL
HHHHHHCCHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LLALSITTALLVWVVPTFKQIFDGFGAKLPAPTQFVLAMSAAAGRWSVPLAAITSLVVFA
HHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHCCCCCCCCHHHHHHHHHHH
TRHALRRSEAARLHFARITLRLPFAGPLLATLCAARWSRALGTLLSAGTPLADAFDSLTH
HHHHHHHHHHHHHEEEEEEEECCCCHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHH
ATGNAWFDRATVAISAQLRRGVRLAPAMREAQCFPEEIVQPVAVAEESGTLDTMLLDVAS
HCCCHHHHHHHHHHHHHHHCCCHHHHHHHHHHCCHHHHHHHHHHHCCCCCHHHHHHHHHH
LSDRQVDEKIAGLASLCEPLVIVVLGVLVGGLVVAMYLPIIQLGNVV
HCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 8820654 [H]