Click here to switch to the map view.

The map label for this gene is dgoK [H]

Identifier: 186477366

GI number: 186477366

Start: 2956799

End: 2957839

Strand: Reverse

Name: dgoK [H]

Synonym: Bphy_2618

Alternate gene names: 186477366

Gene position: 2957839-2956799 (Counterclockwise)

Preceding gene: 186477367

Following gene: 186477365

Centisome position: 85.02

GC content: 68.01

Gene sequence:

>1041_bases
ATGAATCAGACGGGTTCGACCCTGTCCCTCGAACAAGCCCAGCCCGCGCGGACGGCGAGCCATGCCGCACTGATCGCGCT
CGACTGGGGCACGACGTCGCTGCGCGCGTATCTGTTCGATGCGCACGGCGCCGTGCTCGATACGCGTGCGTCGACGGCGG
GCATCATGAACCTTCCCCGCCCGGCTGCCGAAGGGGGGTTCGACGCGGCATTCGACGCCGTCGTCGGTGCGTGGCTGGAC
GGCAATTCCGGCTTGCCCGTGATCGCGGCCGGCATGGTCGGCAGCGCGCAAGGCTGGAAGGAAGCGCCGTATGTGAATGC
GCCCGCCAGCGTGGATGCGCTCGTCGCCGGTATCGTACGCGTGCAGACGGCGCGCGGCGTGCCGCTGAACATCGTGCCTG
GCGTGCTGCAGAACGGCGATCTGCCGAACGTCATGCGCGGCGAGGAAACGCAAATTTTCGGCGCGCTGGCCTGCGCGGGC
GCATCGGCGGCGAGCAAGGGCATGCTGATCGGCTTGCCCGGGACGCACGCGAAATGGGTGATGGTGCGCGACGCGAAGAT
CGAACGATTCGACACCTTCATGACGGGCGAAGTGTTCGCGGCGCTCTCGGAGCACACGATTCTCGGCCGCACGATGATCA
CGCCCGACCGGCCCGATACGGCTTCCTTCCTGCGCGGCGTGCAGGTCGCGCGCGACCAGGGCAAGGCCGGCGTGCTCGCC
ACCATTTTCAGCACGCGTACGCTGGGTCTCACGGGCCAGCTGGCGCGCGAGCAGCAACCCGATTACCTGTCCGGCCTTTT
GATCGGGCATGAACTGAGCGGCCTCGAAGCGGCGCTCGCGCACCGGCAATCGACGCTCGCCGGTAACAAGCTGCAATTGA
TTGGCAATGAAGCGCTTTGCGAGCGCTATCGGCTTGCGCTCGCGCAGTTCGGCTGCCATCAGGCGGACCTCGTGAAGCAG
GCGACGGAGCGCGGCCTGTGGCGCATCGCGGCGCAAGCGGGCCTCGTCAGCGAAGCATCGGGCGCCGCGCAGCCGGGCTG
A

Upstream 100 bases:

>100_bases
GCATGGACGAGCTGATTCCCGTCGTGCAGCGCGAAGCGCGCGCAATCTCGGAAGAGCTGGGCTGGCGTGTGCCGCAACCG
ACTACCCGCAGGATCAAACG

Downstream 100 bases:

>100_bases
AAACGCGACTGACCGCAACCTGAGCCGCGCGCAAAGAACCCAAGGAACCGACATGCAACTCGATCTGAATCTGCCCGCCC
CGTACCAGCCGCACGCCGGC

Product: 2-keto-3-deoxy-galactonokinase

Products: NA

Alternate protein names: 2-keto-3-deoxy-galactonokinase; 2-oxo-3-deoxygalactonate kinase [H]

Number of amino acids: Translated: 346; Mature: 346

Protein sequence:

>346_residues
MNQTGSTLSLEQAQPARTASHAALIALDWGTTSLRAYLFDAHGAVLDTRASTAGIMNLPRPAAEGGFDAAFDAVVGAWLD
GNSGLPVIAAGMVGSAQGWKEAPYVNAPASVDALVAGIVRVQTARGVPLNIVPGVLQNGDLPNVMRGEETQIFGALACAG
ASAASKGMLIGLPGTHAKWVMVRDAKIERFDTFMTGEVFAALSEHTILGRTMITPDRPDTASFLRGVQVARDQGKAGVLA
TIFSTRTLGLTGQLAREQQPDYLSGLLIGHELSGLEAALAHRQSTLAGNKLQLIGNEALCERYRLALAQFGCHQADLVKQ
ATERGLWRIAAQAGLVSEASGAAQPG

Sequences:

>Translated_346_residues
MNQTGSTLSLEQAQPARTASHAALIALDWGTTSLRAYLFDAHGAVLDTRASTAGIMNLPRPAAEGGFDAAFDAVVGAWLD
GNSGLPVIAAGMVGSAQGWKEAPYVNAPASVDALVAGIVRVQTARGVPLNIVPGVLQNGDLPNVMRGEETQIFGALACAG
ASAASKGMLIGLPGTHAKWVMVRDAKIERFDTFMTGEVFAALSEHTILGRTMITPDRPDTASFLRGVQVARDQGKAGVLA
TIFSTRTLGLTGQLAREQQPDYLSGLLIGHELSGLEAALAHRQSTLAGNKLQLIGNEALCERYRLALAQFGCHQADLVKQ
ATERGLWRIAAQAGLVSEASGAAQPG
>Mature_346_residues
MNQTGSTLSLEQAQPARTASHAALIALDWGTTSLRAYLFDAHGAVLDTRASTAGIMNLPRPAAEGGFDAAFDAVVGAWLD
GNSGLPVIAAGMVGSAQGWKEAPYVNAPASVDALVAGIVRVQTARGVPLNIVPGVLQNGDLPNVMRGEETQIFGALACAG
ASAASKGMLIGLPGTHAKWVMVRDAKIERFDTFMTGEVFAALSEHTILGRTMITPDRPDTASFLRGVQVARDQGKAGVLA
TIFSTRTLGLTGQLAREQQPDYLSGLLIGHELSGLEAALAHRQSTLAGNKLQLIGNEALCERYRLALAQFGCHQADLVKQ
ATERGLWRIAAQAGLVSEASGAAQPG

Specific function: D-galactonate degradation; second step. [C]

COG id: COG3734

COG function: function code G; 2-keto-3-deoxy-galactonokinase

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Escherichia coli, GI1790128, Length=294, Percent_Identity=35.7142857142857, Blast_Score=147, Evalue=1e-36,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR007729 [H]

Pfam domain/function: PF05035 DGOK [H]

EC number: =2.7.1.58 [H]

Molecular weight: Translated: 36074; Mature: 36074

Theoretical pI: Translated: 6.63; Mature: 6.63

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
2.3 %Met     (Translated Protein)
3.2 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
2.3 %Met     (Mature Protein)
3.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNQTGSTLSLEQAQPARTASHAALIALDWGTTSLRAYLFDAHGAVLDTRASTAGIMNLPR
CCCCCCEEEECCCCCCCCCCCEEEEEEECCCCEEEEEEEECCCCEEECCCCCCCCCCCCC
PAAEGGFDAAFDAVVGAWLDGNSGLPVIAAGMVGSAQGWKEAPYVNAPASVDALVAGIVR
CCCCCCCHHHHHHHHHHEECCCCCCCEEEECCCCCCCCCCCCCCCCCCCHHHHHHHHHHH
VQTARGVPLNIVPGVLQNGDLPNVMRGEETQIFGALACAGASAASKGMLIGLPGTHAKWV
HHHCCCCCCEECCHHHCCCCCCCCCCCCCHHHHHHHHHCCCCCCCCCEEEECCCCCEEEE
MVRDAKIERFDTFMTGEVFAALSEHTILGRTMITPDRPDTASFLRGVQVARDQGKAGVLA
EEECCCHHHHHHHHHHHHHHHHHCCEEECEEEECCCCCCHHHHHHHHHHHHCCCCCCEEE
TIFSTRTLGLTGQLAREQQPDYLSGLLIGHELSGLEAALAHRQSTLAGNKLQLIGNEALC
EEEHHHCCCCCHHHHHCCCCCHHHHEEECCHHHHHHHHHHHHHHHCCCCEEEEECCHHHH
ERYRLALAQFGCHQADLVKQATERGLWRIAAQAGLVSEASGAAQPG
HHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCC
>Mature Secondary Structure
MNQTGSTLSLEQAQPARTASHAALIALDWGTTSLRAYLFDAHGAVLDTRASTAGIMNLPR
CCCCCCEEEECCCCCCCCCCCEEEEEEECCCCEEEEEEEECCCCEEECCCCCCCCCCCCC
PAAEGGFDAAFDAVVGAWLDGNSGLPVIAAGMVGSAQGWKEAPYVNAPASVDALVAGIVR
CCCCCCCHHHHHHHHHHEECCCCCCCEEEECCCCCCCCCCCCCCCCCCCHHHHHHHHHHH
VQTARGVPLNIVPGVLQNGDLPNVMRGEETQIFGALACAGASAASKGMLIGLPGTHAKWV
HHHCCCCCCEECCHHHCCCCCCCCCCCCCHHHHHHHHHCCCCCCCCCEEEECCCCCEEEE
MVRDAKIERFDTFMTGEVFAALSEHTILGRTMITPDRPDTASFLRGVQVARDQGKAGVLA
EEECCCHHHHHHHHHHHHHHHHHCCEEECEEEECCCCCCHHHHHHHHHHHHCCCCCCEEE
TIFSTRTLGLTGQLAREQQPDYLSGLLIGHELSGLEAALAHRQSTLAGNKLQLIGNEALC
EEEHHHCCCCCHHHHHCCCCCHHHHEEECCHHHHHHHHHHHHHHHCCCCEEEEECCHHHH
ERYRLALAQFGCHQADLVKQATERGLWRIAAQAGLVSEASGAAQPG
HHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 7686882; 9278503 [H]