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The map label for this gene is yagI [H]

Identifier: 186477367

GI number: 186477367

Start: 2957836

End: 2958789

Strand: Reverse

Name: yagI [H]

Synonym: Bphy_2619

Alternate gene names: 186477367

Gene position: 2958789-2957836 (Counterclockwise)

Preceding gene: 186477369

Following gene: 186477366

Centisome position: 85.04

GC content: 66.77

Gene sequence:

>954_bases
ATGAACAAAGCGATGACCTCTCACGCCGACTCCGAAGTACCCGAAGCATCTGAAGCCGAAATGGTGCGCAAGCCCGCCGC
GCGTCCCGCGAACGGCGCCGTGGTGCCGCCGCCGCCCGCCGACACGATCGGGCTGCCGAGCACGCTGCTTGACATCACGC
CGCAGCAAGCCGGCACGCAGACGCTGCTGCGCGGCCTCGCAATTCTCGAAGCCGCCGCCGCCGGCGTGCGGGATCTGCGC
ACCTTCGGCGCCGCGCTAGGCACGACCCGCAGCACGACGCACCGGCTCGTCAGCAGCCTCGTGCAGGCGCGCTATCTGCG
TCAGGTGCAGGGCGGCTACCTGCTCGGCCCGAAGCTGATAGAACTCGGCACGATCGCGCTGGAGCAGATGCCGCTTACGC
AGGTCGCGCGTCCGCATCTGGAGTCGCTTGCCGAACAGACGCACGACACGATCCATCTCGGCGTGCGCGACGGCGACGAC
GTGCTGTACATCGACAAGATTCCCGGCACGCGCGGTCTCGAAATGCGTTCACGCGTGGGTCACCGAATGCCGCTCGCATC
GACGGGTATCGGCAAGGCGATGATGCTCGATCTCGTCCCCGACCAGTGGCAGTCGCTGTTCGATGCGTCGCGCCGCGCGC
TCGCGGGCGTCAGCTTCAAGCCCGACAACCGGCCCGATCAGCAGACTTTCATGCAGCGCATGACGAACTACTCGGCTGGC
GGCTTCACCTTCGACCTCGAAGAGAACGAGGCGTCGATCCGCTGCGTGGCGGCACCCGTGCGCGATGCGTCGGGTTCGAT
CGTCGCGGCGCTGTCCGTGGCGAGCACGATTCCGTACATGTCGCTCGAACGCATGGACGAGCTGATTCCCGTCGTGCAGC
GCGAAGCGCGCGCAATCTCGGAAGAGCTGGGCTGGCGTGTGCCGCAACCGACTACCCGCAGGATCAAACGATGA

Upstream 100 bases:

>100_bases
CGCGCTCACGCAGCCTCGAACCGCTCCCGGCGCAAGCCGTTACGCCGGCTTCTCGCGGTAACTCACCGGTAACTCACCTT
TTGTCTGTTGCCCAGTCGCC

Downstream 100 bases:

>100_bases
ATCAGACGGGTTCGACCCTGTCCCTCGAACAAGCCCAGCCCGCGCGGACGGCGAGCCATGCCGCACTGATCGCGCTCGAC
TGGGGCACGACGTCGCTGCG

Product: IclR family transcriptional regulator

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 317; Mature: 317

Protein sequence:

>317_residues
MNKAMTSHADSEVPEASEAEMVRKPAARPANGAVVPPPPADTIGLPSTLLDITPQQAGTQTLLRGLAILEAAAAGVRDLR
TFGAALGTTRSTTHRLVSSLVQARYLRQVQGGYLLGPKLIELGTIALEQMPLTQVARPHLESLAEQTHDTIHLGVRDGDD
VLYIDKIPGTRGLEMRSRVGHRMPLASTGIGKAMMLDLVPDQWQSLFDASRRALAGVSFKPDNRPDQQTFMQRMTNYSAG
GFTFDLEENEASIRCVAAPVRDASGSIVAALSVASTIPYMSLERMDELIPVVQREARAISEELGWRVPQPTTRRIKR

Sequences:

>Translated_317_residues
MNKAMTSHADSEVPEASEAEMVRKPAARPANGAVVPPPPADTIGLPSTLLDITPQQAGTQTLLRGLAILEAAAAGVRDLR
TFGAALGTTRSTTHRLVSSLVQARYLRQVQGGYLLGPKLIELGTIALEQMPLTQVARPHLESLAEQTHDTIHLGVRDGDD
VLYIDKIPGTRGLEMRSRVGHRMPLASTGIGKAMMLDLVPDQWQSLFDASRRALAGVSFKPDNRPDQQTFMQRMTNYSAG
GFTFDLEENEASIRCVAAPVRDASGSIVAALSVASTIPYMSLERMDELIPVVQREARAISEELGWRVPQPTTRRIKR
>Mature_317_residues
MNKAMTSHADSEVPEASEAEMVRKPAARPANGAVVPPPPADTIGLPSTLLDITPQQAGTQTLLRGLAILEAAAAGVRDLR
TFGAALGTTRSTTHRLVSSLVQARYLRQVQGGYLLGPKLIELGTIALEQMPLTQVARPHLESLAEQTHDTIHLGVRDGDD
VLYIDKIPGTRGLEMRSRVGHRMPLASTGIGKAMMLDLVPDQWQSLFDASRRALAGVSFKPDNRPDQQTFMQRMTNYSAG
GFTFDLEENEASIRCVAAPVRDASGSIVAALSVASTIPYMSLERMDELIPVVQREARAISEELGWRVPQPTTRRIKR

Specific function: Transcriptional Regulator Of The Kdgk Gene For The Kdg Kinase And The Kdgt Gene For The Kdg Permease. [C]

COG id: COG1414

COG function: function code K; Transcriptional regulator

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 iclR-ED (iclR effector binding) domain [H]

Homologues:

Organism=Escherichia coli, GI1788131, Length=265, Percent_Identity=30.5660377358491, Blast_Score=115, Evalue=5e-27,
Organism=Escherichia coli, GI1786468, Length=250, Percent_Identity=29.2, Blast_Score=111, Evalue=5e-26,
Organism=Escherichia coli, GI1789999, Length=256, Percent_Identity=29.296875, Blast_Score=107, Evalue=1e-24,
Organism=Escherichia coli, GI1788581, Length=226, Percent_Identity=31.4159292035398, Blast_Score=102, Evalue=3e-23,
Organism=Escherichia coli, GI87082359, Length=277, Percent_Identity=27.0758122743682, Blast_Score=97, Evalue=1e-21,
Organism=Escherichia coli, GI1786715, Length=255, Percent_Identity=26.2745098039216, Blast_Score=93, Evalue=3e-20,
Organism=Escherichia coli, GI1790752, Length=264, Percent_Identity=23.1060606060606, Blast_Score=74, Evalue=1e-14,

Paralogues:

None

Copy number: 10-20 Molecules/Cell [C]

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR014757
- InterPro:   IPR005471
- InterPro:   IPR011991 [H]

Pfam domain/function: PF09339 HTH_IclR; PF01614 IclR [H]

EC number: NA

Molecular weight: Translated: 34437; Mature: 34437

Theoretical pI: Translated: 7.77; Mature: 7.77

Prosite motif: PS51077 HTH_ICLR ; PS51078 ICLR_ED

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
3.8 %Met     (Translated Protein)
4.1 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
3.8 %Met     (Mature Protein)
4.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNKAMTSHADSEVPEASEAEMVRKPAARPANGAVVPPPPADTIGLPSTLLDITPQQAGTQ
CCCCCCCCCCCCCCCCHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCHHHHHCCCCCCCHH
TLLRGLAILEAAAAGVRDLRTFGAALGTTRSTTHRLVSSLVQARYLRQVQGGYLLGPKLI
HHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHCCCEEECCHHH
ELGTIALEQMPLTQVARPHLESLAEQTHDTIHLGVRDGDDVLYIDKIPGTRGLEMRSRVG
HHHHHHHHHCCHHHHHHHHHHHHHHHCCCEEEEEEECCCCEEEEECCCCCCCCHHHHHCC
HRMPLASTGIGKAMMLDLVPDQWQSLFDASRRALAGVSFKPDNRPDQQTFMQRMTNYSAG
CCCCCCCCCCCHHHHHHCCHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHCCCCC
GFTFDLEENEASIRCVAAPVRDASGSIVAALSVASTIPYMSLERMDELIPVVQREARAIS
CEEEEECCCCCCEEEEEECCCCCCCCEEHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHH
EELGWRVPQPTTRRIKR
HHHCCCCCCCHHHHCCC
>Mature Secondary Structure
MNKAMTSHADSEVPEASEAEMVRKPAARPANGAVVPPPPADTIGLPSTLLDITPQQAGTQ
CCCCCCCCCCCCCCCCHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCHHHHHCCCCCCCHH
TLLRGLAILEAAAAGVRDLRTFGAALGTTRSTTHRLVSSLVQARYLRQVQGGYLLGPKLI
HHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHCCCEEECCHHH
ELGTIALEQMPLTQVARPHLESLAEQTHDTIHLGVRDGDDVLYIDKIPGTRGLEMRSRVG
HHHHHHHHHCCHHHHHHHHHHHHHHHCCCEEEEEEECCCCEEEEECCCCCCCCHHHHHCC
HRMPLASTGIGKAMMLDLVPDQWQSLFDASRRALAGVSFKPDNRPDQQTFMQRMTNYSAG
CCCCCCCCCCCHHHHHHCCHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHCCCCC
GFTFDLEENEASIRCVAAPVRDASGSIVAALSVASTIPYMSLERMDELIPVVQREARAIS
CEEEEECCCCCCEEEEEECCCCCCCCEEHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHH
EELGWRVPQPTTRRIKR
HHHCCCCCCCHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9278503 [H]