| Definition | Burkholderia phymatum STM815 chromosome chromosome 1, complete sequence. |
|---|---|
| Accession | NC_010622 |
| Length | 3,479,187 |
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The map label for this gene is pgpA [H]
Identifier: 186477354
GI number: 186477354
Start: 2945639
End: 2946280
Strand: Direct
Name: pgpA [H]
Synonym: Bphy_2606
Alternate gene names: 186477354
Gene position: 2945639-2946280 (Clockwise)
Preceding gene: 186477353
Following gene: 186477355
Centisome position: 84.66
GC content: 66.36
Gene sequence:
>642_bases ATGCAGAATGAATCCTCGCTTGGCCCGGCGGGCAGTTTCTCCGACGCGCCAACGGGCGAACCGCCCCGCCCCGCGGGCGC GTCGCCTTCCGGCGTGCCGGACGGCGCAGGTGAAGCTGGCCCGAACGGCGCGCCGCGCGGCCAGCCGCGCGCGCCGCGGC CGCGCCGCGCGACTGCGCGCTTCATGCTGTCACACCCGTTGCATATCTTGTCGCTGGGATTCGGCAGCGGCCTTTCGCCC GTCGCGCCCGGCACGGTCGGGACTTTGTTCGCGTGGGCATCGTTCGCTGCGTTCAGCGCCCAGCTGACCGTCATCGAATG GGGCATCCTGATCGTCGTTGGCTTCGTCGCCGGCATCGGCATCTGCGGCTTCACCGCGAACCGGCTCGGCATCGACGACC CGTCGCCCGTCGTGTGGGACGAGATCGTCGCGTTCTGGCTCGTGCTGCTGATAGTGACGCCCGCGAGCTTTACGGGGCAA CTTTGGGCGTTCATCGTGTTCCGCTTCTTCGACATGGTGAAACCGCCGCCTATCCGTTATTTCGACCGCAGACTGAAAGG CGGCTTTGGCATCATGTTCGATGACATCGTCGCGGCGTTTTTCACGTTGCTCGTGATTGCGCTCTGGCGGATGTCGCTCT GA
Upstream 100 bases:
>100_bases ATAACGACGCTCGATGCGGCGGGCGCCGCGCCCGCGATCTCGTGGCGCGACGCGTCCGGCGCTCCCCTCACTCTGACATT GCAAGGCTTCGATCATTTCC
Downstream 100 bases:
>100_bases TCATTCGCAGCGTCTTTCTTACCCGAGTCCAAGTCCAGCATGGCTACCGATTCCGTCGTCCACCAACTCGCCATTCGCGT CGGCAATCGTCTGCGGGACG
Product: phosphatidylglycerophosphatase A
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 213; Mature: 213
Protein sequence:
>213_residues MQNESSLGPAGSFSDAPTGEPPRPAGASPSGVPDGAGEAGPNGAPRGQPRAPRPRRATARFMLSHPLHILSLGFGSGLSP VAPGTVGTLFAWASFAAFSAQLTVIEWGILIVVGFVAGIGICGFTANRLGIDDPSPVVWDEIVAFWLVLLIVTPASFTGQ LWAFIVFRFFDMVKPPPIRYFDRRLKGGFGIMFDDIVAAFFTLLVIALWRMSL
Sequences:
>Translated_213_residues MQNESSLGPAGSFSDAPTGEPPRPAGASPSGVPDGAGEAGPNGAPRGQPRAPRPRRATARFMLSHPLHILSLGFGSGLSP VAPGTVGTLFAWASFAAFSAQLTVIEWGILIVVGFVAGIGICGFTANRLGIDDPSPVVWDEIVAFWLVLLIVTPASFTGQ LWAFIVFRFFDMVKPPPIRYFDRRLKGGFGIMFDDIVAAFFTLLVIALWRMSL >Mature_213_residues MQNESSLGPAGSFSDAPTGEPPRPAGASPSGVPDGAGEAGPNGAPRGQPRAPRPRRATARFMLSHPLHILSLGFGSGLSP VAPGTVGTLFAWASFAAFSAQLTVIEWGILIVVGFVAGIGICGFTANRLGIDDPSPVVWDEIVAFWLVLLIVTPASFTGQ LWAFIVFRFFDMVKPPPIRYFDRRLKGGFGIMFDDIVAAFFTLLVIALWRMSL
Specific function: One of the three phospholipid phosphatases, specifically hydrolyzes phosphatidylglycerophosphate [H]
COG id: COG1267
COG function: function code I; Phosphatidylglycerophosphatase A and related proteins
Gene ontology:
Cell location: Cell inner membrane; Multi-pass membrane protein [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
Organism=Escherichia coli, GI1786620, Length=155, Percent_Identity=39.3548387096774, Blast_Score=118, Evalue=3e-28,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR007686 [H]
Pfam domain/function: PF04608 PgpA [H]
EC number: =3.1.3.27 [H]
Molecular weight: Translated: 22660; Mature: 22660
Theoretical pI: Translated: 8.53; Mature: 8.53
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 2.3 %Met (Translated Protein) 2.8 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 2.3 %Met (Mature Protein) 2.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MQNESSLGPAGSFSDAPTGEPPRPAGASPSGVPDGAGEAGPNGAPRGQPRAPRPRRATAR CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHH FMLSHPLHILSLGFGSGLSPVAPGTVGTLFAWASFAAFSAQLTVIEWGILIVVGFVAGIG HHHHCCHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH ICGFTANRLGIDDPSPVVWDEIVAFWLVLLIVTPASFTGQLWAFIVFRFFDMVKPPPIRY HHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHCCCCCHHH FDRRLKGGFGIMFDDIVAAFFTLLVIALWRMSL HHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHCC >Mature Secondary Structure MQNESSLGPAGSFSDAPTGEPPRPAGASPSGVPDGAGEAGPNGAPRGQPRAPRPRRATAR CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHH FMLSHPLHILSLGFGSGLSPVAPGTVGTLFAWASFAAFSAQLTVIEWGILIVVGFVAGIG HHHHCCHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH ICGFTANRLGIDDPSPVVWDEIVAFWLVLLIVTPASFTGQLWAFIVFRFFDMVKPPPIRY HHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHCCCCCHHH FDRRLKGGFGIMFDDIVAAFFTLLVIALWRMSL HHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: 2846510; 9278503 [H]