| Definition | Burkholderia phymatum STM815 chromosome chromosome 1, complete sequence. |
|---|---|
| Accession | NC_010622 |
| Length | 3,479,187 |
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The map label for this gene is thiL [H]
Identifier: 186477353
GI number: 186477353
Start: 2944654
End: 2945649
Strand: Direct
Name: thiL [H]
Synonym: Bphy_2605
Alternate gene names: 186477353
Gene position: 2944654-2945649 (Clockwise)
Preceding gene: 186477349
Following gene: 186477354
Centisome position: 84.64
GC content: 67.77
Gene sequence:
>996_bases ATGCTTTCAGAGTTTTCGCTGATCGACCGTTTCTTTGCGCGCCGCGCGGCGGGGTCGACCTATCCGCAGCGCGCCGCGCT CGGCATCGGTGACGACTGCGCGCTGCTCGCCCCGCCCGCAGGCGAGATGCTCGCGATTTCGACGGACATGCTTGTCGCAG GCCGCCATTTCTTTCCGGATGTCGATCCCAAAGCGCTCGGCCACAAGGCGCTCGCCGTGAATCTGTCGGACCTCGCGGCG ATGGGCGCCAAGCCGCAAGCCTTCACGCTGGCCTTCGCGCTGCCGGAAGCCGACGCGGACTGGCTCGCCGCGTTCAGCGA CGGTCTGTTCGAACTCGCCGAGCGCCACGGGTGCGAACTCGTCGGTGGTGACACCACGAGCGGCCCGCTCAATCTGTGCC TCACGGTGTTCGGCTCGGTGCCGCCGCAAACGGCGCTGCGCCGCGACGCCGCGCAACCCGGCGACGATATCTGGATTTCA GGAACGCTCGGCGACGCGCGTGCAAGCCTCGGCGTGCAACGCAACGAGTGGTCCGTCGATGCCAGCGATGCTGCGACATT GCGCCGCGCCATGAATCTGCCCGAACCGCGGGTCGCGCTGGGCCTTGCGTTGCGTGGGGTCGCGCGCGCCGCGCTCGATA TTTCGGACGGCCTTGCGGGCGACCTGATGCACATCCTCGAACGATCTCAGTTGAATGCGACCGTCGACGCCGACGCTTTG CCGCGCTCGGACGCGCTGCGCCGCCTTCCCGCCGATATCCAGCGGCGCTGCACGATCGCGGGCGGCGACGACTACGAGTT GTGCTTCACCGCGCCGCCTTCCTCACGCGACGCAGTCGTTGCGGCAGGTCAACAGGCGCGTGTGCCCGTGACGCGCGTCG GTACAATAACGACGCTCGATGCGGCGGGCGCCGCGCCCGCGATCTCGTGGCGCGACGCGTCCGGCGCTCCCCTCACTCTG ACATTGCAAGGCTTCGATCATTTCCATGCAGAATGA
Upstream 100 bases:
>100_bases TGCGAGGCGCGCCTTTGACGTCGTGTTAGCTTCCATTGGCGCTTCTTGAGCGCATCCATCCACCCGCTTCGGCGGCCTTT CGCAGTCACATGCCTTGTTT
Downstream 100 bases:
>100_bases ATCCTCGCTTGGCCCGGCGGGCAGTTTCTCCGACGCGCCAACGGGCGAACCGCCCCGCCCCGCGGGCGCGTCGCCTTCCG GCGTGCCGGACGGCGCAGGT
Product: thiamine monophosphate kinase
Products: NA
Alternate protein names: Thiamine-phosphate kinase [H]
Number of amino acids: Translated: 331; Mature: 331
Protein sequence:
>331_residues MLSEFSLIDRFFARRAAGSTYPQRAALGIGDDCALLAPPAGEMLAISTDMLVAGRHFFPDVDPKALGHKALAVNLSDLAA MGAKPQAFTLAFALPEADADWLAAFSDGLFELAERHGCELVGGDTTSGPLNLCLTVFGSVPPQTALRRDAAQPGDDIWIS GTLGDARASLGVQRNEWSVDASDAATLRRAMNLPEPRVALGLALRGVARAALDISDGLAGDLMHILERSQLNATVDADAL PRSDALRRLPADIQRRCTIAGGDDYELCFTAPPSSRDAVVAAGQQARVPVTRVGTITTLDAAGAAPAISWRDASGAPLTL TLQGFDHFHAE
Sequences:
>Translated_331_residues MLSEFSLIDRFFARRAAGSTYPQRAALGIGDDCALLAPPAGEMLAISTDMLVAGRHFFPDVDPKALGHKALAVNLSDLAA MGAKPQAFTLAFALPEADADWLAAFSDGLFELAERHGCELVGGDTTSGPLNLCLTVFGSVPPQTALRRDAAQPGDDIWIS GTLGDARASLGVQRNEWSVDASDAATLRRAMNLPEPRVALGLALRGVARAALDISDGLAGDLMHILERSQLNATVDADAL PRSDALRRLPADIQRRCTIAGGDDYELCFTAPPSSRDAVVAAGQQARVPVTRVGTITTLDAAGAAPAISWRDASGAPLTL TLQGFDHFHAE >Mature_331_residues MLSEFSLIDRFFARRAAGSTYPQRAALGIGDDCALLAPPAGEMLAISTDMLVAGRHFFPDVDPKALGHKALAVNLSDLAA MGAKPQAFTLAFALPEADADWLAAFSDGLFELAERHGCELVGGDTTSGPLNLCLTVFGSVPPQTALRRDAAQPGDDIWIS GTLGDARASLGVQRNEWSVDASDAATLRRAMNLPEPRVALGLALRGVARAALDISDGLAGDLMHILERSQLNATVDADAL PRSDALRRLPADIQRRCTIAGGDDYELCFTAPPSSRDAVVAAGQQARVPVTRVGTITTLDAAGAAPAISWRDASGAPLTL TLQGFDHFHAE
Specific function: Thiamine biosynthesis. [C]
COG id: COG0611
COG function: function code H; Thiamine monophosphate kinase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the thiamine-monophosphate kinase family [H]
Homologues:
Organism=Escherichia coli, GI1786619, Length=327, Percent_Identity=48.6238532110092, Blast_Score=266, Evalue=2e-72,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR000728 - InterPro: IPR010918 - InterPro: IPR016188 - InterPro: IPR006283 [H]
Pfam domain/function: PF00586 AIRS; PF02769 AIRS_C [H]
EC number: =2.7.4.16 [H]
Molecular weight: Translated: 34750; Mature: 34750
Theoretical pI: Translated: 4.65; Mature: 4.65
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.5 %Cys (Translated Protein) 1.8 %Met (Translated Protein) 3.3 %Cys+Met (Translated Protein) 1.5 %Cys (Mature Protein) 1.8 %Met (Mature Protein) 3.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLSEFSLIDRFFARRAAGSTYPQRAALGIGDDCALLAPPAGEMLAISTDMLVAGRHFFPD CCCHHHHHHHHHHHHHCCCCCCCHHCCCCCCCCEEECCCCCCEEEEECCCEEECCCCCCC VDPKALGHKALAVNLSDLAAMGAKPQAFTLAFALPEADADWLAAFSDGLFELAERHGCEL CCHHHHCCEEEEEEHHHHHHCCCCCCEEEEEEECCCCCHHHHHHHHHHHHHHHHHCCCEE VGGDTTSGPLNLCLTVFGSVPPQTALRRDAAQPGDDIWISGTLGDARASLGVQRNEWSVD ECCCCCCCHHHHHHHHHCCCCCHHHHHHHCCCCCCCEEEEECCCCHHHHCCCCCCCCCCC ASDAATLRRAMNLPEPRVALGLALRGVARAALDISDGLAGDLMHILERSQLNATVDADAL CHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHCCCEECCCCC PRSDALRRLPADIQRRCTIAGGDDYELCFTAPPSSRDAVVAAGQQARVPVTRVGTITTLD CCHHHHHHCCHHHHHEEEEECCCCCEEEEECCCCCCCEEEECCCCCCCCEEECCEEEEEC AAGAAPAISWRDASGAPLTLTLQGFDHFHAE CCCCCCEEEECCCCCCCEEEEEECCCCCCCC >Mature Secondary Structure MLSEFSLIDRFFARRAAGSTYPQRAALGIGDDCALLAPPAGEMLAISTDMLVAGRHFFPD CCCHHHHHHHHHHHHHCCCCCCCHHCCCCCCCCEEECCCCCCEEEEECCCEEECCCCCCC VDPKALGHKALAVNLSDLAAMGAKPQAFTLAFALPEADADWLAAFSDGLFELAERHGCEL CCHHHHCCEEEEEEHHHHHHCCCCCCEEEEEEECCCCCHHHHHHHHHHHHHHHHHCCCEE VGGDTTSGPLNLCLTVFGSVPPQTALRRDAAQPGDDIWISGTLGDARASLGVQRNEWSVD ECCCCCCCHHHHHHHHHCCCCCHHHHHHHCCCCCCCEEEEECCCCHHHHCCCCCCCCCCC ASDAATLRRAMNLPEPRVALGLALRGVARAALDISDGLAGDLMHILERSQLNATVDADAL CHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHCCCEECCCCC PRSDALRRLPADIQRRCTIAGGDDYELCFTAPPSSRDAVVAAGQQARVPVTRVGTITTLD CCHHHHHHCCHHHHHEEEEECCCCCEEEEECCCCCCCEEEECCCCCCCCEEECCEEEEEC AAGAAPAISWRDASGAPLTLTLQGFDHFHAE CCCCCCEEEECCCCCCCEEEEEECCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 11677609 [H]