Definition Burkholderia phymatum STM815 chromosome chromosome 1, complete sequence.
Accession NC_010622
Length 3,479,187

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The map label for this gene is pgpA [H]

Identifier: 186477354

GI number: 186477354

Start: 2945639

End: 2946280

Strand: Direct

Name: pgpA [H]

Synonym: Bphy_2606

Alternate gene names: 186477354

Gene position: 2945639-2946280 (Clockwise)

Preceding gene: 186477353

Following gene: 186477355

Centisome position: 84.66

GC content: 66.36

Gene sequence:

>642_bases
ATGCAGAATGAATCCTCGCTTGGCCCGGCGGGCAGTTTCTCCGACGCGCCAACGGGCGAACCGCCCCGCCCCGCGGGCGC
GTCGCCTTCCGGCGTGCCGGACGGCGCAGGTGAAGCTGGCCCGAACGGCGCGCCGCGCGGCCAGCCGCGCGCGCCGCGGC
CGCGCCGCGCGACTGCGCGCTTCATGCTGTCACACCCGTTGCATATCTTGTCGCTGGGATTCGGCAGCGGCCTTTCGCCC
GTCGCGCCCGGCACGGTCGGGACTTTGTTCGCGTGGGCATCGTTCGCTGCGTTCAGCGCCCAGCTGACCGTCATCGAATG
GGGCATCCTGATCGTCGTTGGCTTCGTCGCCGGCATCGGCATCTGCGGCTTCACCGCGAACCGGCTCGGCATCGACGACC
CGTCGCCCGTCGTGTGGGACGAGATCGTCGCGTTCTGGCTCGTGCTGCTGATAGTGACGCCCGCGAGCTTTACGGGGCAA
CTTTGGGCGTTCATCGTGTTCCGCTTCTTCGACATGGTGAAACCGCCGCCTATCCGTTATTTCGACCGCAGACTGAAAGG
CGGCTTTGGCATCATGTTCGATGACATCGTCGCGGCGTTTTTCACGTTGCTCGTGATTGCGCTCTGGCGGATGTCGCTCT
GA

Upstream 100 bases:

>100_bases
ATAACGACGCTCGATGCGGCGGGCGCCGCGCCCGCGATCTCGTGGCGCGACGCGTCCGGCGCTCCCCTCACTCTGACATT
GCAAGGCTTCGATCATTTCC

Downstream 100 bases:

>100_bases
TCATTCGCAGCGTCTTTCTTACCCGAGTCCAAGTCCAGCATGGCTACCGATTCCGTCGTCCACCAACTCGCCATTCGCGT
CGGCAATCGTCTGCGGGACG

Product: phosphatidylglycerophosphatase A

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 213; Mature: 213

Protein sequence:

>213_residues
MQNESSLGPAGSFSDAPTGEPPRPAGASPSGVPDGAGEAGPNGAPRGQPRAPRPRRATARFMLSHPLHILSLGFGSGLSP
VAPGTVGTLFAWASFAAFSAQLTVIEWGILIVVGFVAGIGICGFTANRLGIDDPSPVVWDEIVAFWLVLLIVTPASFTGQ
LWAFIVFRFFDMVKPPPIRYFDRRLKGGFGIMFDDIVAAFFTLLVIALWRMSL

Sequences:

>Translated_213_residues
MQNESSLGPAGSFSDAPTGEPPRPAGASPSGVPDGAGEAGPNGAPRGQPRAPRPRRATARFMLSHPLHILSLGFGSGLSP
VAPGTVGTLFAWASFAAFSAQLTVIEWGILIVVGFVAGIGICGFTANRLGIDDPSPVVWDEIVAFWLVLLIVTPASFTGQ
LWAFIVFRFFDMVKPPPIRYFDRRLKGGFGIMFDDIVAAFFTLLVIALWRMSL
>Mature_213_residues
MQNESSLGPAGSFSDAPTGEPPRPAGASPSGVPDGAGEAGPNGAPRGQPRAPRPRRATARFMLSHPLHILSLGFGSGLSP
VAPGTVGTLFAWASFAAFSAQLTVIEWGILIVVGFVAGIGICGFTANRLGIDDPSPVVWDEIVAFWLVLLIVTPASFTGQ
LWAFIVFRFFDMVKPPPIRYFDRRLKGGFGIMFDDIVAAFFTLLVIALWRMSL

Specific function: One of the three phospholipid phosphatases, specifically hydrolyzes phosphatidylglycerophosphate [H]

COG id: COG1267

COG function: function code I; Phosphatidylglycerophosphatase A and related proteins

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Escherichia coli, GI1786620, Length=155, Percent_Identity=39.3548387096774, Blast_Score=118, Evalue=3e-28,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR007686 [H]

Pfam domain/function: PF04608 PgpA [H]

EC number: =3.1.3.27 [H]

Molecular weight: Translated: 22660; Mature: 22660

Theoretical pI: Translated: 8.53; Mature: 8.53

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
2.3 %Met     (Translated Protein)
2.8 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
2.3 %Met     (Mature Protein)
2.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MQNESSLGPAGSFSDAPTGEPPRPAGASPSGVPDGAGEAGPNGAPRGQPRAPRPRRATAR
CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHH
FMLSHPLHILSLGFGSGLSPVAPGTVGTLFAWASFAAFSAQLTVIEWGILIVVGFVAGIG
HHHHCCHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
ICGFTANRLGIDDPSPVVWDEIVAFWLVLLIVTPASFTGQLWAFIVFRFFDMVKPPPIRY
HHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHCCCCCHHH
FDRRLKGGFGIMFDDIVAAFFTLLVIALWRMSL
HHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure
MQNESSLGPAGSFSDAPTGEPPRPAGASPSGVPDGAGEAGPNGAPRGQPRAPRPRRATAR
CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHH
FMLSHPLHILSLGFGSGLSPVAPGTVGTLFAWASFAAFSAQLTVIEWGILIVVGFVAGIG
HHHHCCHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
ICGFTANRLGIDDPSPVVWDEIVAFWLVLLIVTPASFTGQLWAFIVFRFFDMVKPPPIRY
HHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHCCCCCHHH
FDRRLKGGFGIMFDDIVAAFFTLLVIALWRMSL
HHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 2846510; 9278503 [H]