| Definition | Burkholderia phymatum STM815 chromosome chromosome 1, complete sequence. |
|---|---|
| Accession | NC_010622 |
| Length | 3,479,187 |
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The map label for this gene is gltK [H]
Identifier: 186477319
GI number: 186477319
Start: 2891166
End: 2891843
Strand: Reverse
Name: gltK [H]
Synonym: Bphy_2571
Alternate gene names: 186477319
Gene position: 2891843-2891166 (Counterclockwise)
Preceding gene: 186477320
Following gene: 186477318
Centisome position: 83.12
GC content: 60.47
Gene sequence:
>678_bases ATGCATCATTTCGACTGGAGCGGTATTCCGGGCGCACTGCCGACGCTGTGGACGGGTGCCATCGTCACGCTCAAGATCAC GATTCTCGCGATTGTGATCGGCATCGTGTGGGGGACCGTGCTCGCGCTGTTGCGCCTTTCGGGCATCAAGCCGCTGGAGT GGTTTGCGAAACTTTACGTGACGCTATTCCGCTCGATCCCGCTGGTGATGGTGCTGCTGTGGTTCTTCCTGATCGTGCCG CAGGTGCTGCAGAACGTGCTGGGCCTTTCCGCGGACATCGACATTCGCCTCGCCTCGGCGATGGTCGCGTTCTCGCTGTT CGAAGCCGCGTACTATTCGGAAATCATCCGTGCGGGTATTCAGGCCGTGCCGCGCGGGCAAGTAAACGCGTCGTACGCGC TCGGCATGAGCTATCCGCAGGCGATGCGTCTCGTCGTGCTGCCGCAGGCGTTCCGCGCGATGGTGCCGCTGCTGCTCACG CAGGCCATCGTGCTCTTTCAGGATACGTCGCTCGTCTACGTGATCAGCCTCGCCGACTTCTTCCGCACGGCCACGAATAT TGGCGACCGTGACGGTACGAACGTCGAGATGGTACTGTTCGCCGGTGCGTGTTACTTCGTGATCTGCGTGGTCGCGTCGA GCCTCGTCAAAAGTCTTCAGAAAAAGGTCGCAAGATGA
Upstream 100 bases:
>100_bases CCGTCACGGTTGCGTATCTGCTCATCAACCTGATCGTGATGACGCTGATGCGCATCGTCGAAGCCAAGAGCCGGCTGCCT GGCTATATCGGAGGCAAGTG
Downstream 100 bases:
>100_bases TCTCTATCAAGAATGTGTCCAAGTGGTACGGTCAGTTCCAGGTGCTGACCGACTGCACGACGGAAATCAAAAAGGGCGAA GTGGTCGTCGTGTGCGGCCC
Product: polar amino acid ABC transporter inner membrane subunit
Products: ADP; phosphate; L-glutamate [Cytoplasm] [C]
Alternate protein names: NA
Number of amino acids: Translated: 225; Mature: 225
Protein sequence:
>225_residues MHHFDWSGIPGALPTLWTGAIVTLKITILAIVIGIVWGTVLALLRLSGIKPLEWFAKLYVTLFRSIPLVMVLLWFFLIVP QVLQNVLGLSADIDIRLASAMVAFSLFEAAYYSEIIRAGIQAVPRGQVNASYALGMSYPQAMRLVVLPQAFRAMVPLLLT QAIVLFQDTSLVYVISLADFFRTATNIGDRDGTNVEMVLFAGACYFVICVVASSLVKSLQKKVAR
Sequences:
>Translated_225_residues MHHFDWSGIPGALPTLWTGAIVTLKITILAIVIGIVWGTVLALLRLSGIKPLEWFAKLYVTLFRSIPLVMVLLWFFLIVP QVLQNVLGLSADIDIRLASAMVAFSLFEAAYYSEIIRAGIQAVPRGQVNASYALGMSYPQAMRLVVLPQAFRAMVPLLLT QAIVLFQDTSLVYVISLADFFRTATNIGDRDGTNVEMVLFAGACYFVICVVASSLVKSLQKKVAR >Mature_225_residues MHHFDWSGIPGALPTLWTGAIVTLKITILAIVIGIVWGTVLALLRLSGIKPLEWFAKLYVTLFRSIPLVMVLLWFFLIVP QVLQNVLGLSADIDIRLASAMVAFSLFEAAYYSEIIRAGIQAVPRGQVNASYALGMSYPQAMRLVVLPQAFRAMVPLLLT QAIVLFQDTSLVYVISLADFFRTATNIGDRDGTNVEMVLFAGACYFVICVVASSLVKSLQKKVAR
Specific function: Part of the binding-protein-dependent transport system for aspartate/glutamate; probably responsible for the translocation of the substrate across the membrane [H]
COG id: COG0765
COG function: function code E; ABC-type amino acid transport system, permease component
Gene ontology:
Cell location: Cell inner membrane; Multi-pass membrane protein [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 ABC transmembrane type-1 domain [H]
Homologues:
Organism=Escherichia coli, GI1786873, Length=224, Percent_Identity=69.6428571428571, Blast_Score=316, Evalue=6e-88, Organism=Escherichia coli, GI1788226, Length=214, Percent_Identity=35.981308411215, Blast_Score=124, Evalue=4e-30, Organism=Escherichia coli, GI87082239, Length=209, Percent_Identity=34.4497607655502, Blast_Score=112, Evalue=2e-26, Organism=Escherichia coli, GI1786874, Length=179, Percent_Identity=34.0782122905028, Blast_Score=111, Evalue=3e-26, Organism=Escherichia coli, GI1787030, Length=221, Percent_Identity=29.4117647058824, Blast_Score=92, Evalue=3e-20, Organism=Escherichia coli, GI1788645, Length=217, Percent_Identity=28.5714285714286, Blast_Score=87, Evalue=1e-18, Organism=Escherichia coli, GI1787087, Length=227, Percent_Identity=27.3127753303965, Blast_Score=86, Evalue=1e-18, Organism=Escherichia coli, GI48994930, Length=130, Percent_Identity=33.0769230769231, Blast_Score=80, Evalue=1e-16, Organism=Escherichia coli, GI1788646, Length=208, Percent_Identity=25.9615384615385, Blast_Score=74, Evalue=6e-15, Organism=Escherichia coli, GI1787086, Length=212, Percent_Identity=25, Blast_Score=68, Evalue=5e-13,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR010065 - InterPro: IPR000515 [H]
Pfam domain/function: PF00528 BPD_transp_1 [H]
EC number: NA
Molecular weight: Translated: 24739; Mature: 24739
Theoretical pI: Translated: 9.64; Mature: 9.64
Prosite motif: PS50928 ABC_TM1
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.9 %Cys (Translated Protein) 3.1 %Met (Translated Protein) 4.0 %Cys+Met (Translated Protein) 0.9 %Cys (Mature Protein) 3.1 %Met (Mature Protein) 4.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MHHFDWSGIPGALPTLWTGAIVTLKITILAIVIGIVWGTVLALLRLSGIKPLEWFAKLYV CCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHH TLFRSIPLVMVLLWFFLIVPQVLQNVLGLSADIDIRLASAMVAFSLFEAAYYSEIIRAGI HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH QAVPRGQVNASYALGMSYPQAMRLVVLPQAFRAMVPLLLTQAIVLFQDTSLVYVISLADF HHCCCCCCCCHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHH FRTATNIGDRDGTNVEMVLFAGACYFVICVVASSLVKSLQKKVAR HHHHHCCCCCCCCCEEHHHHHHHHHHHHHHHHHHHHHHHHHHHCC >Mature Secondary Structure MHHFDWSGIPGALPTLWTGAIVTLKITILAIVIGIVWGTVLALLRLSGIKPLEWFAKLYV CCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHH TLFRSIPLVMVLLWFFLIVPQVLQNVLGLSADIDIRLASAMVAFSLFEAAYYSEIIRAGI HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH QAVPRGQVNASYALGMSYPQAMRLVVLPQAFRAMVPLLLTQAIVLFQDTSLVYVISLADF HHCCCCCCCCHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHH FRTATNIGDRDGTNVEMVLFAGACYFVICVVASSLVKSLQKKVAR HHHHHCCCCCCCCCEEHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: ATP; L-glutamate [Periplasm]; H2O [C]
Specific reaction: ATP + L-glutamate [Periplasm] + H2O = ADP + phosphate + L-glutamate [Cytoplasm] [C]
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: 11206551; 11258796 [H]