| Definition | Burkholderia phymatum STM815 chromosome chromosome 1, complete sequence. |
|---|---|
| Accession | NC_010622 |
| Length | 3,479,187 |
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The map label for this gene is ppnK
Identifier: 186477253
GI number: 186477253
Start: 2815259
End: 2816161
Strand: Direct
Name: ppnK
Synonym: Bphy_2504
Alternate gene names: 186477253
Gene position: 2815259-2816161 (Clockwise)
Preceding gene: 186477249
Following gene: 186477254
Centisome position: 80.92
GC content: 64.67
Gene sequence:
>903_bases ATGCAAGCTAACAGCCAGTTCAAGACCGTTGCGCTCGTCGGGCGCAGCAACACGCCGGGCATCGGGGAACCGCTGACCGC GCTCGCCACGTGCATCGAGAAGCTGGGCTTCGAGATCGCGTTCGAGGCGGAAACCGCGCAGGAAATCGGCGTCTCGCGCT GGCCCGCGCTGCAGCCGGCGGAAATTGGCGCGCGCGCGGACGTGGCGATCGTTCTCGGCGGCGACGGCACGATGCTCGGC ATCGGCCGACAGCTGGCGCCATACAAGACACCGCTGATCGGCATCAACCACGGCCGGCTCGGCTTCATCACCGACATCCC GTTCTCCGACATGCGCGAGATCATCCCGCAGATGCTGTCGGGCAGCTTCGAACGGGAAGAGCGCTCGCTGCTCGAATCGC GGATCATGCGCGACGGCCAGCCGATCTACCACGCGCTCGCGTTCAACGACGTCGTTGTGAACCGTTCGGGCTTTTCGGGC ATGGCCGAACTGCGCGTGTCGGTGGACGGACGCTTCATGTACAACCAGCGCTCGGACGGGTTGATCGTCGCCACGCCGAC GGGCTCGACGGCCTACGCGCTGTCGTCGCAAGGGCCGATTCTGCATCCGCAGCTGCAGGGCCTCGTGCTCGTGCCGATTG CCCCGCACGCACTGTCCAACCGGCCTATCGTGATTCCGGACGACTCGAAGGTCAGCATCCAGATCATCTCTGGCCGCGAC GTCAACGTGAACTTCGACATGCAGTCGTTCACCGCGCTGGAGCTGAACGACACGATCGACGTGCGCCGCTCACGCCATAC CGTGCCTTTCCTGCATCCCGTCGGCTACAGCTATTACGCGACGCTGCGCAAGAAGCTGCACTGGAACGAGTACCCGTCAC ACGAAGACGACCCGGACGACTGA
Upstream 100 bases:
>100_bases AGGCTGGCCGCCAACACGCGGCCGCCGGGCATCCGCCCCAGCCGGCGCGCCGCCGCCGCCAACGGTTCTTTTCAGGTCGC ACCTATGGTGTAATGCCGGC
Downstream 100 bases:
>100_bases ACGCACACCGGACACAAGCGGCGCAGCCAGTCCGCAGAGCCCGAACGTCACCGCAAACGACCAGACCAACTCACGCAAGC CACGCCAGACACACGAGCAT
Product: NAD(+)/NADH kinase family protein
Products: NA
Alternate protein names: Poly(P)/ATP NAD kinase
Number of amino acids: Translated: 300; Mature: 300
Protein sequence:
>300_residues MQANSQFKTVALVGRSNTPGIGEPLTALATCIEKLGFEIAFEAETAQEIGVSRWPALQPAEIGARADVAIVLGGDGTMLG IGRQLAPYKTPLIGINHGRLGFITDIPFSDMREIIPQMLSGSFEREERSLLESRIMRDGQPIYHALAFNDVVVNRSGFSG MAELRVSVDGRFMYNQRSDGLIVATPTGSTAYALSSQGPILHPQLQGLVLVPIAPHALSNRPIVIPDDSKVSIQIISGRD VNVNFDMQSFTALELNDTIDVRRSRHTVPFLHPVGYSYYATLRKKLHWNEYPSHEDDPDD
Sequences:
>Translated_300_residues MQANSQFKTVALVGRSNTPGIGEPLTALATCIEKLGFEIAFEAETAQEIGVSRWPALQPAEIGARADVAIVLGGDGTMLG IGRQLAPYKTPLIGINHGRLGFITDIPFSDMREIIPQMLSGSFEREERSLLESRIMRDGQPIYHALAFNDVVVNRSGFSG MAELRVSVDGRFMYNQRSDGLIVATPTGSTAYALSSQGPILHPQLQGLVLVPIAPHALSNRPIVIPDDSKVSIQIISGRD VNVNFDMQSFTALELNDTIDVRRSRHTVPFLHPVGYSYYATLRKKLHWNEYPSHEDDPDD >Mature_300_residues MQANSQFKTVALVGRSNTPGIGEPLTALATCIEKLGFEIAFEAETAQEIGVSRWPALQPAEIGARADVAIVLGGDGTMLG IGRQLAPYKTPLIGINHGRLGFITDIPFSDMREIIPQMLSGSFEREERSLLESRIMRDGQPIYHALAFNDVVVNRSGFSG MAELRVSVDGRFMYNQRSDGLIVATPTGSTAYALSSQGPILHPQLQGLVLVPIAPHALSNRPIVIPDDSKVSIQIISGRD VNVNFDMQSFTALELNDTIDVRRSRHTVPFLHPVGYSYYATLRKKLHWNEYPSHEDDPDD
Specific function: Catalyzes the phosphorylation of NAD to NADP. Utilizes ATP and other nucleoside triphosphates as well as inorganic polyphosphate as a source of phosphorus
COG id: COG0061
COG function: function code G; Predicted sugar kinase
Gene ontology:
Cell location: Cytoplasm
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the NAD kinase family
Homologues:
Organism=Homo sapiens, GI55743112, Length=260, Percent_Identity=28.4615384615385, Blast_Score=99, Evalue=4e-21, Organism=Escherichia coli, GI1788968, Length=288, Percent_Identity=37.5, Blast_Score=201, Evalue=6e-53, Organism=Saccharomyces cerevisiae, GI6320794, Length=241, Percent_Identity=29.4605809128631, Blast_Score=125, Evalue=6e-30, Organism=Saccharomyces cerevisiae, GI6322509, Length=267, Percent_Identity=29.5880149812734, Blast_Score=123, Evalue=4e-29, Organism=Saccharomyces cerevisiae, GI6325068, Length=177, Percent_Identity=32.2033898305085, Blast_Score=107, Evalue=2e-24, Organism=Drosophila melanogaster, GI28573828, Length=251, Percent_Identity=30.2788844621514, Blast_Score=102, Evalue=4e-22, Organism=Drosophila melanogaster, GI28573832, Length=251, Percent_Identity=30.2788844621514, Blast_Score=101, Evalue=7e-22, Organism=Drosophila melanogaster, GI161077047, Length=251, Percent_Identity=30.2788844621514, Blast_Score=101, Evalue=7e-22, Organism=Drosophila melanogaster, GI28573830, Length=251, Percent_Identity=30.2788844621514, Blast_Score=101, Evalue=8e-22, Organism=Drosophila melanogaster, GI28573826, Length=251, Percent_Identity=30.2788844621514, Blast_Score=100, Evalue=8e-22, Organism=Drosophila melanogaster, GI20129957, Length=276, Percent_Identity=27.8985507246377, Blast_Score=94, Evalue=1e-19, Organism=Drosophila melanogaster, GI281363321, Length=276, Percent_Identity=27.8985507246377, Blast_Score=94, Evalue=1e-19, Organism=Drosophila melanogaster, GI281363323, Length=276, Percent_Identity=27.8985507246377, Blast_Score=94, Evalue=2e-19, Organism=Drosophila melanogaster, GI24653424, Length=276, Percent_Identity=27.8985507246377, Blast_Score=93, Evalue=2e-19, Organism=Drosophila melanogaster, GI24653422, Length=276, Percent_Identity=27.8985507246377, Blast_Score=93, Evalue=2e-19,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): PPNK_BURP8 (B2JGE9)
Other databases:
- EMBL: CP001043 - RefSeq: YP_001858723.1 - ProteinModelPortal: B2JGE9 - SMR: B2JGE9 - GeneID: 6243988 - GenomeReviews: CP001043_GR - KEGG: bph:Bphy_2504 - HOGENOM: HBG713904 - OMA: FESFMID - ProtClustDB: PRK02155 - GO: GO:0005737 - HAMAP: MF_00361 - InterPro: IPR016064 - InterPro: IPR017438 - InterPro: IPR017437 - InterPro: IPR002504 - Gene3D: G3DSA:2.60.200.30 - Gene3D: G3DSA:3.40.50.10330 - PANTHER: PTHR20275
Pfam domain/function: PF01513 NAD_kinase; SSF111331 ATP-NAD_kinase_PpnK-typ
EC number: =2.7.1.23
Molecular weight: Translated: 32940; Mature: 32940
Theoretical pI: Translated: 5.59; Mature: 5.59
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.3 %Cys (Translated Protein) 2.7 %Met (Translated Protein) 3.0 %Cys+Met (Translated Protein) 0.3 %Cys (Mature Protein) 2.7 %Met (Mature Protein) 3.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MQANSQFKTVALVGRSNTPGIGEPLTALATCIEKLGFEIAFEAETAQEIGVSRWPALQPA CCCCCCEEEEEEEECCCCCCCCCHHHHHHHHHHHCCCEEEEECCCHHHCCCCCCCCCCCH EIGARADVAIVLGGDGTMLGIGRQLAPYKTPLIGINHGRLGFITDIPFSDMREIIPQMLS HCCCCCCEEEEECCCCEEEECCCCCCCCCCCEEECCCCCEEEEECCCHHHHHHHHHHHHC GSFEREERSLLESRIMRDGQPIYHALAFNDVVVNRSGFSGMAELRVSVDGRFMYNQRSDG CCCCHHHHHHHHHHHHHCCCCEEEEEEECEEEEECCCCCCEEEEEEEECCEEEECCCCCC LIVATPTGSTAYALSSQGPILHPQLQGLVLVPIAPHALSNRPIVIPDDSKVSIQIISGRD EEEECCCCCEEEEECCCCCEECCCCCCEEEEEECCHHCCCCCEEEECCCEEEEEEECCCE VNVNFDMQSFTALELNDTIDVRRSRHTVPFLHPVGYSYYATLRKKLHWNEYPSHEDDPDD EEEEECCCCEEEEEECCCEEHHHCCCCCCEEECCCHHHHHHHHHHHCCCCCCCCCCCCCC >Mature Secondary Structure MQANSQFKTVALVGRSNTPGIGEPLTALATCIEKLGFEIAFEAETAQEIGVSRWPALQPA CCCCCCEEEEEEEECCCCCCCCCHHHHHHHHHHHCCCEEEEECCCHHHCCCCCCCCCCCH EIGARADVAIVLGGDGTMLGIGRQLAPYKTPLIGINHGRLGFITDIPFSDMREIIPQMLS HCCCCCCEEEEECCCCEEEECCCCCCCCCCCEEECCCCCEEEEECCCHHHHHHHHHHHHC GSFEREERSLLESRIMRDGQPIYHALAFNDVVVNRSGFSGMAELRVSVDGRFMYNQRSDG CCCCHHHHHHHHHHHHHCCCCEEEEEEECEEEEECCCCCCEEEEEEEECCEEEECCCCCC LIVATPTGSTAYALSSQGPILHPQLQGLVLVPIAPHALSNRPIVIPDDSKVSIQIISGRD EEEECCCCCEEEEECCCCCEECCCCCCEEEEEECCHHCCCCCEEEECCCEEEEEEECCCE VNVNFDMQSFTALELNDTIDVRRSRHTVPFLHPVGYSYYATLRKKLHWNEYPSHEDDPDD EEEEECCCCEEEEEECCCEEHHHCCCCCCEEECCCHHHHHHHHHHHCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA