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The map label for this gene is recN [H]

Identifier: 186477254

GI number: 186477254

Start: 2816260

End: 2817927

Strand: Direct

Name: recN [H]

Synonym: Bphy_2505

Alternate gene names: 186477254

Gene position: 2816260-2817927 (Clockwise)

Preceding gene: 186477253

Following gene: 186477256

Centisome position: 80.95

GC content: 66.97

Gene sequence:

>1668_bases
ATGCTCCGCCACCTTTCGATACGCGACTTCGTCATCGTCGCCGCGCTCGACCTCGAATTCGACAGCGGCTTTACGGTCTT
CTCCGGCGAAACGGGCGCCGGCAAATCCATTCTCATCGACGCCCTCGCTTTGGCGCTCGGCTCGCGCGCCGATGCGAGCG
TCGTGCGCACGGGCGAGGCGCGCGCGGACATCACGGCCGAATTCGACACGCACGCGCTCGTCGATGCATGGCTCGACGAA
CAGGCGCTCGCCGCTGGCGAAACGGAGCACGGCAACACTGTGATGCTGCGCCGCGTGGTCGATGCGAACGGCCGCTCGCG
GGCGTTCATCAACGGTACGGCGGCGACGCTCACGCAACTGCGCGAAGTCGGCGAAATGCTCGTCGATATTCATGGCCAGC
ACGCCCATCAGCTGTTGATGCGTCCAGATGCGCAGCGCGAACTGTTCGACACCCACGCCGGCCTGCTCGACACGACGGCC
GCCGTCAACCGCGCCTGGCGCGCCTGGCGCGAAGCCGTGCAAGCGGTCGAAACCGCGCAGAGCAAGGACCGCGAACTGCA
ACTGGAACGCGAGCGCCTCGCGTGGCAATTGGCCGAACTCGACAAGCTGTCGCCGCAGCCCGGCGAGTGGGAAGAAGTCA
ACACGGAACACCGGCGCCTGTCGCACTCGGCAAATCTGATCGACGGTGTGCAGGGCGCGCTGTCGGCGCTATCCGAATCG
GACGAGGCGATGCTCGGCCATCTGTCGTCGATCATTTCGAAGCTGCGCGATCTCGCCGAAATCGATCCCGAGCTGAACGA
CGCGCTCGCCGCGCTCGAACCGGCCGAAATCCAGTTGCAGGAGGCCGCGTATTCGCTGAGCCATTATGCGCAGCGGCTCG
AACTCGATCCCGACCGGCTTGCGCAAGTCGAAAAGCGCCTCGACGCGCTGCATTCGGCCGCCCGCAAGTTCCGGCTGCAG
CCGGAAACCTTGCCGCAGGAACATCAGGCGCGCCGCGAACAGCTTGCGAAGCTCGACGCCGCCGCCGACCTCGACGCGTT
ACGCGCCGCCGAAGCCAAAGCGAAAGAAGCCTACGCCGCCGAAGCGAAGGTGCTGTCCAAGGCGCGGGCGAAAGCCGCGA
AAGCGCTCGGCGCGGCCGTGACGACGGGCATGCAGGAACTGTCGATGGTGGGCGGCAGCTTCGAGGTCGCGCTCGTCCCG
CTGCCCGAAGGCGGCGCGCACGGCATAGAGCAGATCGAATTCCGCGTCGCCGGCCATGCTGGCGTGCCGCTGCGGCCGCT
CGCGAAAGTGGCCTCCGGCGGGGAACTCGCCCGTATCAGCCTCGCGCTCGCAGTGATCGCGAGCGCCGCCAGCCCGACAC
CGACGCTGATCTTCGACGAAGTGGACACGGGCATCGGCGGCGGCGTGGCTGAAGTGGTCGGCCGGCTGCTGCATCAGCTT
GGCGAACAACGCCAGGTGCTGTGCGTGACGCACTTGCCGCAAGTCGCCGCCCGCGGCGACCAGCATTTCCAGGTCGCCAA
GAGCGGCAACGGCAAGGGCGGCACGATCAGCACGGTGACGTCGCTGGACAAGTCGAGCCGTATCGAGGAAGTCGCACGCA
TGCTGGGCGGCCTGGAAATCACGGCCACCACGCGCAAGCACGCGAAGGAAATGCTGAGGGCGGCGTAA

Upstream 100 bases:

>100_bases
GAACGCACACCGGACACAAGCGGCGCAGCCAGTCCGCAGAGCCCGAACGTCACCGCAAACGACCAGACCAACTCACGCAA
GCCACGCCAGACACACGAGC

Downstream 100 bases:

>100_bases
CGCTCAAAGTGCACGCGCGACAGACAGCGAATCCGTCCCGCGCGCCTTCCTGCAGCCTTAGCCGAACACGCGCCGCCACA
GACGCAGCACGGCTTCGCGC

Product: DNA repair protein RecN

Products: NA

Alternate protein names: Recombination protein N [H]

Number of amino acids: Translated: 555; Mature: 555

Protein sequence:

>555_residues
MLRHLSIRDFVIVAALDLEFDSGFTVFSGETGAGKSILIDALALALGSRADASVVRTGEARADITAEFDTHALVDAWLDE
QALAAGETEHGNTVMLRRVVDANGRSRAFINGTAATLTQLREVGEMLVDIHGQHAHQLLMRPDAQRELFDTHAGLLDTTA
AVNRAWRAWREAVQAVETAQSKDRELQLERERLAWQLAELDKLSPQPGEWEEVNTEHRRLSHSANLIDGVQGALSALSES
DEAMLGHLSSIISKLRDLAEIDPELNDALAALEPAEIQLQEAAYSLSHYAQRLELDPDRLAQVEKRLDALHSAARKFRLQ
PETLPQEHQARREQLAKLDAAADLDALRAAEAKAKEAYAAEAKVLSKARAKAAKALGAAVTTGMQELSMVGGSFEVALVP
LPEGGAHGIEQIEFRVAGHAGVPLRPLAKVASGGELARISLALAVIASAASPTPTLIFDEVDTGIGGGVAEVVGRLLHQL
GEQRQVLCVTHLPQVAARGDQHFQVAKSGNGKGGTISTVTSLDKSSRIEEVARMLGGLEITATTRKHAKEMLRAA

Sequences:

>Translated_555_residues
MLRHLSIRDFVIVAALDLEFDSGFTVFSGETGAGKSILIDALALALGSRADASVVRTGEARADITAEFDTHALVDAWLDE
QALAAGETEHGNTVMLRRVVDANGRSRAFINGTAATLTQLREVGEMLVDIHGQHAHQLLMRPDAQRELFDTHAGLLDTTA
AVNRAWRAWREAVQAVETAQSKDRELQLERERLAWQLAELDKLSPQPGEWEEVNTEHRRLSHSANLIDGVQGALSALSES
DEAMLGHLSSIISKLRDLAEIDPELNDALAALEPAEIQLQEAAYSLSHYAQRLELDPDRLAQVEKRLDALHSAARKFRLQ
PETLPQEHQARREQLAKLDAAADLDALRAAEAKAKEAYAAEAKVLSKARAKAAKALGAAVTTGMQELSMVGGSFEVALVP
LPEGGAHGIEQIEFRVAGHAGVPLRPLAKVASGGELARISLALAVIASAASPTPTLIFDEVDTGIGGGVAEVVGRLLHQL
GEQRQVLCVTHLPQVAARGDQHFQVAKSGNGKGGTISTVTSLDKSSRIEEVARMLGGLEITATTRKHAKEMLRAA
>Mature_555_residues
MLRHLSIRDFVIVAALDLEFDSGFTVFSGETGAGKSILIDALALALGSRADASVVRTGEARADITAEFDTHALVDAWLDE
QALAAGETEHGNTVMLRRVVDANGRSRAFINGTAATLTQLREVGEMLVDIHGQHAHQLLMRPDAQRELFDTHAGLLDTTA
AVNRAWRAWREAVQAVETAQSKDRELQLERERLAWQLAELDKLSPQPGEWEEVNTEHRRLSHSANLIDGVQGALSALSES
DEAMLGHLSSIISKLRDLAEIDPELNDALAALEPAEIQLQEAAYSLSHYAQRLELDPDRLAQVEKRLDALHSAARKFRLQ
PETLPQEHQARREQLAKLDAAADLDALRAAEAKAKEAYAAEAKVLSKARAKAAKALGAAVTTGMQELSMVGGSFEVALVP
LPEGGAHGIEQIEFRVAGHAGVPLRPLAKVASGGELARISLALAVIASAASPTPTLIFDEVDTGIGGGVAEVVGRLLHQL
GEQRQVLCVTHLPQVAARGDQHFQVAKSGNGKGGTISTVTSLDKSSRIEEVARMLGGLEITATTRKHAKEMLRAA

Specific function: May be involved in recombinational repair of damaged DNA [H]

COG id: COG0497

COG function: function code L; ATPase involved in DNA repair

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the recN family [H]

Homologues:

Organism=Escherichia coli, GI48994901, Length=561, Percent_Identity=44.9197860962567, Blast_Score=441, Evalue=1e-125,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR004604
- InterPro:   IPR003395 [H]

Pfam domain/function: PF02463 SMC_N [H]

EC number: NA

Molecular weight: Translated: 59592; Mature: 59592

Theoretical pI: Translated: 5.49; Mature: 5.49

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.2 %Cys     (Translated Protein)
1.6 %Met     (Translated Protein)
1.8 %Cys+Met (Translated Protein)
0.2 %Cys     (Mature Protein)
1.6 %Met     (Mature Protein)
1.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLRHLSIRDFVIVAALDLEFDSGFTVFSGETGAGKSILIDALALALGSRADASVVRTGEA
CCCCCCHHHEEEEEEEEEEECCCEEEEECCCCCCHHHHHHHHHHHHCCCCCCHHEECCCC
RADITAEFDTHALVDAWLDEQALAAGETEHGNTVMLRRVVDANGRSRAFINGTAATLTQL
CCCEEECCCHHHHHHHHHCHHHHHCCCCCCCCEEEEEHHHCCCCCCEEEECCHHHHHHHH
REVGEMLVDIHGQHAHQLLMRPDAQRELFDTHAGLLDTTAAVNRAWRAWREAVQAVETAQ
HHHHHHHHHHCCHHHHHHHHCCCHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHH
SKDRELQLERERLAWQLAELDKLSPQPGEWEEVNTEHRRLSHSANLIDGVQGALSALSES
HCCHHHHHHHHHHHHHHHHHHHCCCCCCCCHHCCHHHHHHHHHHHHHHHHHHHHHHHCCC
DEAMLGHLSSIISKLRDLAEIDPELNDALAALEPAEIQLQEAAYSLSHYAQRLELDPDRL
HHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHCCCHHHHHHHHHHHHHHHHHHHCCCHHHH
AQVEKRLDALHSAARKFRLQPETLPQEHQARREQLAKLDAAADLDALRAAEAKAKEAYAA
HHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
EAKVLSKARAKAAKALGAAVTTGMQELSMVGGSFEVALVPLPEGGAHGIEQIEFRVAGHA
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEEECCCCCCCCHHHEEEEEECCC
GVPLRPLAKVASGGELARISLALAVIASAASPTPTLIFDEVDTGIGGGVAEVVGRLLHQL
CCCHHHHHHHCCCCCHHHHHHHHHHHHHCCCCCCEEEEECCCCCCCCCHHHHHHHHHHHH
GEQRQVLCVTHLPQVAARGDQHFQVAKSGNGKGGTISTVTSLDKSSRIEEVARMLGGLEI
CCCCCEEEEHHCHHHHHCCCCCEEEEECCCCCCCEEHHHHHHHHHHHHHHHHHHHCCEEE
TATTRKHAKEMLRAA
EEHHHHHHHHHHHCC
>Mature Secondary Structure
MLRHLSIRDFVIVAALDLEFDSGFTVFSGETGAGKSILIDALALALGSRADASVVRTGEA
CCCCCCHHHEEEEEEEEEEECCCEEEEECCCCCCHHHHHHHHHHHHCCCCCCHHEECCCC
RADITAEFDTHALVDAWLDEQALAAGETEHGNTVMLRRVVDANGRSRAFINGTAATLTQL
CCCEEECCCHHHHHHHHHCHHHHHCCCCCCCCEEEEEHHHCCCCCCEEEECCHHHHHHHH
REVGEMLVDIHGQHAHQLLMRPDAQRELFDTHAGLLDTTAAVNRAWRAWREAVQAVETAQ
HHHHHHHHHHCCHHHHHHHHCCCHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHH
SKDRELQLERERLAWQLAELDKLSPQPGEWEEVNTEHRRLSHSANLIDGVQGALSALSES
HCCHHHHHHHHHHHHHHHHHHHCCCCCCCCHHCCHHHHHHHHHHHHHHHHHHHHHHHCCC
DEAMLGHLSSIISKLRDLAEIDPELNDALAALEPAEIQLQEAAYSLSHYAQRLELDPDRL
HHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHCCCHHHHHHHHHHHHHHHHHHHCCCHHHH
AQVEKRLDALHSAARKFRLQPETLPQEHQARREQLAKLDAAADLDALRAAEAKAKEAYAA
HHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
EAKVLSKARAKAAKALGAAVTTGMQELSMVGGSFEVALVPLPEGGAHGIEQIEFRVAGHA
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEEECCCCCCCCHHHEEEEEECCC
GVPLRPLAKVASGGELARISLALAVIASAASPTPTLIFDEVDTGIGGGVAEVVGRLLHQL
CCCHHHHHHHCCCCCHHHHHHHHHHHHHCCCCCCEEEEECCCCCCCCCHHHHHHHHHHHH
GEQRQVLCVTHLPQVAARGDQHFQVAKSGNGKGGTISTVTSLDKSSRIEEVARMLGGLEI
CCCCCEEEEHHCHHHHHCCCCCEEEEECCCCCCCEEHHHHHHHHHHHHHHHHHHHCCEEE
TATTRKHAKEMLRAA
EEHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 3037486; 9205837; 9278503 [H]