| Definition | Burkholderia phymatum STM815 chromosome chromosome 1, complete sequence. |
|---|---|
| Accession | NC_010622 |
| Length | 3,479,187 |
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The map label for this gene is 186477158
Identifier: 186477158
GI number: 186477158
Start: 2706064
End: 2706420
Strand: Direct
Name: 186477158
Synonym: Bphy_2407
Alternate gene names: NA
Gene position: 2706064-2706420 (Clockwise)
Preceding gene: 186477157
Following gene: 186477159
Centisome position: 77.78
GC content: 65.55
Gene sequence:
>357_bases GTGAACATTCGCTCTGCTTATACGTCCGCGATCGCCGCAATGGGCATCGCCTGTTCGACCAGCGCCTTCGCCGGCACCGT CTTCGTTCATGCCGCCTATGTGCCCGCCGCGTTGTACGTGCCGGCGCGCACGCTCTATTACGTGCCGCCGCAACCGCATG ACGCGGTAGCCGTTGTACCCGCCACGCCTGTCGTGCCTTACATCGCCGTAGTGCCGCCACCCACGCCTGCGAAGCCCTTG CCGTACGCGACGGTTGCCGTGCCTGTCGTCGCGGCGCCCGCGTATGTCATGGTGCCCAGCAAGCGCATCGTCTATACACA GCCAGTTGCAGCGATGCCCGTGGTAGTCGCGCGCTGA
Upstream 100 bases:
>100_bases GCTGCCCTTCGGCGGACTCGGTGGGTATCGTTTGCACGTCGGCGGCAAGGTGAGGACTTCACCTCGCATCCGCCGACGAT GTCCGCTTCAGGAGTTTCAT
Downstream 100 bases:
>100_bases CACCCCGTTGACGTGCTGGATACGGCGATTCACTTGATCTTTGCAGAGGTGCGTCCAACAATAAAACCTCTGCTCTCGCA ACATCCACCGACTTTCGACG
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 118; Mature: 118
Protein sequence:
>118_residues MNIRSAYTSAIAAMGIACSTSAFAGTVFVHAAYVPAALYVPARTLYYVPPQPHDAVAVVPATPVVPYIAVVPPPTPAKPL PYATVAVPVVAAPAYVMVPSKRIVYTQPVAAMPVVVAR
Sequences:
>Translated_118_residues MNIRSAYTSAIAAMGIACSTSAFAGTVFVHAAYVPAALYVPARTLYYVPPQPHDAVAVVPATPVVPYIAVVPPPTPAKPL PYATVAVPVVAAPAYVMVPSKRIVYTQPVAAMPVVVAR >Mature_118_residues MNIRSAYTSAIAAMGIACSTSAFAGTVFVHAAYVPAALYVPARTLYYVPPQPHDAVAVVPATPVVPYIAVVPPPTPAKPL PYATVAVPVVAAPAYVMVPSKRIVYTQPVAAMPVVVAR
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 12216; Mature: 12216
Theoretical pI: Translated: 9.78; Mature: 9.78
Prosite motif: PS00013 PROKAR_LIPOPROTEIN
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 3.4 %Met (Translated Protein) 4.2 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 3.4 %Met (Mature Protein) 4.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNIRSAYTSAIAAMGIACSTSAFAGTVFVHAAYVPAALYVPARTLYYVPPQPHDAVAVVP CCCHHHHHHHHHHHCCCCCCCCCHHEEEEEHHHCCEEEEECCCEEEECCCCCCCCEEEEE ATPVVPYIAVVPPPTPAKPLPYATVAVPVVAAPAYVMVPSKRIVYTQPVAAMPVVVAR CCCCCCEEEEECCCCCCCCCCCHHEEEEHHCCCEEEEECCCEEEEECCCCCCCEEEEC >Mature Secondary Structure MNIRSAYTSAIAAMGIACSTSAFAGTVFVHAAYVPAALYVPARTLYYVPPQPHDAVAVVP CCCHHHHHHHHHHHCCCCCCCCCHHEEEEEHHHCCEEEEECCCEEEECCCCCCCCEEEEE ATPVVPYIAVVPPPTPAKPLPYATVAVPVVAAPAYVMVPSKRIVYTQPVAAMPVVVAR CCCCCCEEEEECCCCCCCCCCCHHEEEEHHCCCEEEEECCCEEEEECCCCCCCEEEEC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA