| Definition | Burkholderia phymatum STM815 chromosome chromosome 1, complete sequence. |
|---|---|
| Accession | NC_010622 |
| Length | 3,479,187 |
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The map label for this gene is 186477159
Identifier: 186477159
GI number: 186477159
Start: 2706539
End: 2707009
Strand: Direct
Name: 186477159
Synonym: Bphy_2408
Alternate gene names: NA
Gene position: 2706539-2707009 (Clockwise)
Preceding gene: 186477158
Following gene: 186477160
Centisome position: 77.79
GC content: 61.57
Gene sequence:
>471_bases ATGCCGGAGATCGAAAAGGACAAGGTCATCGCCGTGCTGAACCAGATTCTCGAATCCGAGCTGGCAGGCGTGGTTCGCTA TACGCACTACTCTTTTCTCGTGTTCGGCTTTGGCCGTATTCCCATCGTGTCATGGCTGCGCCAGCAGGCGGACGAATCGC TCACGCATGCGCATCTGGCAGGCGAATGGATCACGACGCTCGGCGAATATCCGTCGCTCGGCATCGGGCCGCTGCTCGAT TCGCATACGACGGACATCGCCTCGATCCTGCGCGAGTCGCTCATGGCGGAAGATGTCGCGCTCGGCCTCTATCGCGATCT GCTCGCACTGGTGAAGGACCGATCCGTCGCGCTCGAAGAATATGCGCGGCAGATGATCGCCACCGAAGAAATGCACGCAG GCGAAGTCGACAAGATGCTGCGCAAGCCGGGCACGGTGGCGACCTCTGGCGAGCGCGGCGCGGCGCATTGA
Upstream 100 bases:
>100_bases GATACGGCGATTCACTTGATCTTTGCAGAGGTGCGTCCAACAATAAAACCTCTGCTCTCGCAACATCCACCGACTTTCGA CGAGCATTACGGAGGGCCAC
Downstream 100 bases:
>100_bases ATTCTTCGCTGCTGTCAGGGCGCGAACGCACGTTTCGATGCGGCCGCGCCCGATTGTCAAATCACCCATCGCAGCGATAT TCGATCGCTCACCGAACCGT
Product: Ferritin Dps family protein
Products: NA
Alternate protein names: Bacterioferritin; Ferritin And Dps; Ferritin-Like Domain Subfamily; Dps Family Ferritin
Number of amino acids: Translated: 156; Mature: 155
Protein sequence:
>156_residues MPEIEKDKVIAVLNQILESELAGVVRYTHYSFLVFGFGRIPIVSWLRQQADESLTHAHLAGEWITTLGEYPSLGIGPLLD SHTTDIASILRESLMAEDVALGLYRDLLALVKDRSVALEEYARQMIATEEMHAGEVDKMLRKPGTVATSGERGAAH
Sequences:
>Translated_156_residues MPEIEKDKVIAVLNQILESELAGVVRYTHYSFLVFGFGRIPIVSWLRQQADESLTHAHLAGEWITTLGEYPSLGIGPLLD SHTTDIASILRESLMAEDVALGLYRDLLALVKDRSVALEEYARQMIATEEMHAGEVDKMLRKPGTVATSGERGAAH >Mature_155_residues PEIEKDKVIAVLNQILESELAGVVRYTHYSFLVFGFGRIPIVSWLRQQADESLTHAHLAGEWITTLGEYPSLGIGPLLDS HTTDIASILRESLMAEDVALGLYRDLLALVKDRSVALEEYARQMIATEEMHAGEVDKMLRKPGTVATSGERGAAH
Specific function: Unknown
COG id: COG2193
COG function: function code P; Bacterioferritin (cytochrome b1)
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 17231; Mature: 17100
Theoretical pI: Translated: 4.85; Mature: 4.85
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 3.2 %Met (Translated Protein) 3.2 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 2.6 %Met (Mature Protein) 2.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPEIEKDKVIAVLNQILESELAGVVRYTHYSFLVFGFGRIPIVSWLRQQADESLTHAHLA CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHH GEWITTLGEYPSLGIGPLLDSHTTDIASILRESLMAEDVALGLYRDLLALVKDRSVALEE HHHHHHHCCCCCCCCCCHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHH YARQMIATEEMHAGEVDKMLRKPGTVATSGERGAAH HHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCC >Mature Secondary Structure PEIEKDKVIAVLNQILESELAGVVRYTHYSFLVFGFGRIPIVSWLRQQADESLTHAHLA CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHH GEWITTLGEYPSLGIGPLLDSHTTDIASILRESLMAEDVALGLYRDLLALVKDRSVALEE HHHHHHHCCCCCCCCCCHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHH YARQMIATEEMHAGEVDKMLRKPGTVATSGERGAAH HHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA