| Definition | Burkholderia phymatum STM815 chromosome chromosome 1, complete sequence. |
|---|---|
| Accession | NC_010622 |
| Length | 3,479,187 |
Click here to switch to the map view.
The map label for this gene is 186477139
Identifier: 186477139
GI number: 186477139
Start: 2683718
End: 2684365
Strand: Reverse
Name: 186477139
Synonym: Bphy_2388
Alternate gene names: NA
Gene position: 2684365-2683718 (Counterclockwise)
Preceding gene: 186477140
Following gene: 186477138
Centisome position: 77.15
GC content: 55.09
Gene sequence:
>648_bases ATGAACCTACGGCAAGTTGAATGCAGCGTTGTGCTGTGTCTATCAGCAGCCCTCGCATCTGGCCCATGCGTGGCGGCCAT AACGGAATTCCAGCCGCACGTTGAGGCCCCGCAAAACAGGTTCATTGACAAGCCCGAAATCAACCCTTCTCCTCAGCACG TTCTCGTCGTTCGCGGCCGAAAACCTGCCGACCTGGAGATATGGTTCGGAGTCGTGTACGGGACGACAAATCGGAAGTGC GAGTCGCAAACAATGGTCGGTCGCATCTTTGGCGCACCAGAAGTCGAGCAGGCCATTGTTGACTGGGTGCGAGTGCCGAA GGAGGATCGAGACTTTTCGGTCCGCTTCTTTCTTGATCGATACGAACCGGGCAAGTGCCTATGGCAGCCCTTCGGAACCT ACATTGCCACGTTCGCCCCAAGTGATAGGCAAGGTCCCGGCGGATATAGCGGTTTTACACTTCTCCGTGAGAATGGCCGA AACGAAGTAACCATTGACCTGACCTGCGAACGAAAATTCGACGGAGTGTCTGGAGATAAATATCTCTTGTGCGTGCGACG CCGTCGGACGCCCCTGAATAGCGACATCAACGACACCATCTCGACGGATGGCGGAATCATCAACTTGGATGTTGACCTCG CACCATGA
Upstream 100 bases:
>100_bases GTATGGTCAAGGCTGGCGTGACGAAGACTTCGCTCACGCACGGGGGGCGGCGCCGCTCGGCGCGTTGTAGTATCACTGCC TAACAACAATCGGGGATGCC
Downstream 100 bases:
>100_bases GTTGAAGCTTGGTAAGTGCAACCAGCATCTGTCTGTTTCAGATTGATCCCAGAGTCCGCTTCGGGTCGGCTGCAGAAGTT GGGGAGCGGCTCCGCGCCGC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 215; Mature: 215
Protein sequence:
>215_residues MNLRQVECSVVLCLSAALASGPCVAAITEFQPHVEAPQNRFIDKPEINPSPQHVLVVRGRKPADLEIWFGVVYGTTNRKC ESQTMVGRIFGAPEVEQAIVDWVRVPKEDRDFSVRFFLDRYEPGKCLWQPFGTYIATFAPSDRQGPGGYSGFTLLRENGR NEVTIDLTCERKFDGVSGDKYLLCVRRRRTPLNSDINDTISTDGGIINLDVDLAP
Sequences:
>Translated_215_residues MNLRQVECSVVLCLSAALASGPCVAAITEFQPHVEAPQNRFIDKPEINPSPQHVLVVRGRKPADLEIWFGVVYGTTNRKC ESQTMVGRIFGAPEVEQAIVDWVRVPKEDRDFSVRFFLDRYEPGKCLWQPFGTYIATFAPSDRQGPGGYSGFTLLRENGR NEVTIDLTCERKFDGVSGDKYLLCVRRRRTPLNSDINDTISTDGGIINLDVDLAP >Mature_215_residues MNLRQVECSVVLCLSAALASGPCVAAITEFQPHVEAPQNRFIDKPEINPSPQHVLVVRGRKPADLEIWFGVVYGTTNRKC ESQTMVGRIFGAPEVEQAIVDWVRVPKEDRDFSVRFFLDRYEPGKCLWQPFGTYIATFAPSDRQGPGGYSGFTLLRENGR NEVTIDLTCERKFDGVSGDKYLLCVRRRRTPLNSDINDTISTDGGIINLDVDLAP
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 24038; Mature: 24038
Theoretical pI: Translated: 5.38; Mature: 5.38
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
3.3 %Cys (Translated Protein) 0.9 %Met (Translated Protein) 4.2 %Cys+Met (Translated Protein) 3.3 %Cys (Mature Protein) 0.9 %Met (Mature Protein) 4.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNLRQVECSVVLCLSAALASGPCVAAITEFQPHVEAPQNRFIDKPEINPSPQHVLVVRGR CCCCHHHHHHHEEHHHHHCCCCEEEEEECCCCCCCCCHHHCCCCCCCCCCCCEEEEEECC KPADLEIWFGVVYGTTNRKCESQTMVGRIFGAPEVEQAIVDWVRVPKEDRDFSVRFFLDR CCCCEEEEEEEEECCCCCCCCCHHHHHHCCCCCHHHHHHHHHHHCCCCCCCEEEEEEEEC YEPGKCLWQPFGTYIATFAPSDRQGPGGYSGFTLLRENGRNEVTIDLTCERKFDGVSGDK CCCCCEEHCCCCCEEEEECCCCCCCCCCCCCEEEEEECCCCEEEEEEEECCCCCCCCCCE YLLCVRRRRTPLNSDINDTISTDGGIINLDVDLAP EEEEEECCCCCCCCCCCCCCCCCCCEEEEEEEECC >Mature Secondary Structure MNLRQVECSVVLCLSAALASGPCVAAITEFQPHVEAPQNRFIDKPEINPSPQHVLVVRGR CCCCHHHHHHHEEHHHHHCCCCEEEEEECCCCCCCCCHHHCCCCCCCCCCCCEEEEEECC KPADLEIWFGVVYGTTNRKCESQTMVGRIFGAPEVEQAIVDWVRVPKEDRDFSVRFFLDR CCCCEEEEEEEEECCCCCCCCCHHHHHHCCCCCHHHHHHHHHHHCCCCCCCEEEEEEEEC YEPGKCLWQPFGTYIATFAPSDRQGPGGYSGFTLLRENGRNEVTIDLTCERKFDGVSGDK CCCCCEEHCCCCCEEEEECCCCCCCCCCCCCEEEEEECCCCEEEEEEEECCCCCCCCCCE YLLCVRRRRTPLNSDINDTISTDGGIINLDVDLAP EEEEEECCCCCCCCCCCCCCCCCCCEEEEEEEECC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA