Definition Burkholderia phymatum STM815 chromosome chromosome 1, complete sequence.
Accession NC_010622
Length 3,479,187

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The map label for this gene is 186477138

Identifier: 186477138

GI number: 186477138

Start: 2682825

End: 2683451

Strand: Reverse

Name: 186477138

Synonym: Bphy_2387

Alternate gene names: NA

Gene position: 2683451-2682825 (Counterclockwise)

Preceding gene: 186477139

Following gene: 186477137

Centisome position: 77.13

GC content: 55.34

Gene sequence:

>627_bases
TTGAGGCTGCGGACCCTATTTGTCACAACGGCATCGATCGCTTGCTGCGGATGCTTGCATTCACCACCGAGCTATCCGGG
CGCAGGTGGCAAGAACCTCGAACCTGCGTCCTACGCATCAAGTTTATGTCCAGATCTCAGCGGAAGATATGAGGGACGTG
GATTGCTGGTGGACGGCGATACCGTTACCCGGCAGGCACAGCAGAGCCTGCGTATCGACTATGCATTTCCTTTCAAGGAT
GCCCTTGAGGCTGGTGAGCTTCAGGCAGCGGAAACGGGTAGATACCCTCAGTCCGGAGCAATCAACTGGAGCGACCGGAG
GGCGACTGTGACGCTTGCCTTTGCTAGCGGACAGCCTGTCGAGTACATCTCTTCGATGGAGGACAAAGATCGATTCGTGT
GCACGGGTCGAAACGGAAAGATTGTATGGGGTGGCGGCAGTGGAACGGGGCGCTCGGAGTTCGGCCCGAACAGTACAGAC
TCATCGGCTGCGCTTTACCTCGACGAGCATGGCGACCTGATGGTTGAGGACCACATGCAAGTTCACATGAGTATGCTGTT
CAGTGCAATCCCGACGGGAACAGCAAAGCATTACTCGATCTATAGATTTAAACGCATATCGGACTGA

Upstream 100 bases:

>100_bases
ACCGTTGACAAGCCCTATCATTGACATTTGCGACAGGCGCACTTGGAAGAGCACGATCGAGGATTCCCGGTTTGTCGAGC
GCCATAAAGAAGGACCAGAA

Downstream 100 bases:

>100_bases
CCGGCGCAATTTGCGGATACTGCTCCAACTGATTGTCAGATGGACACGCCGAGAATTTCTTGTGTTCATTTGTCTCGTGA
AATGTCTGCTCTGGAGCAGA

Product: putative lipoprotein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 208; Mature: 208

Protein sequence:

>208_residues
MRLRTLFVTTASIACCGCLHSPPSYPGAGGKNLEPASYASSLCPDLSGRYEGRGLLVDGDTVTRQAQQSLRIDYAFPFKD
ALEAGELQAAETGRYPQSGAINWSDRRATVTLAFASGQPVEYISSMEDKDRFVCTGRNGKIVWGGGSGTGRSEFGPNSTD
SSAALYLDEHGDLMVEDHMQVHMSMLFSAIPTGTAKHYSIYRFKRISD

Sequences:

>Translated_208_residues
MRLRTLFVTTASIACCGCLHSPPSYPGAGGKNLEPASYASSLCPDLSGRYEGRGLLVDGDTVTRQAQQSLRIDYAFPFKD
ALEAGELQAAETGRYPQSGAINWSDRRATVTLAFASGQPVEYISSMEDKDRFVCTGRNGKIVWGGGSGTGRSEFGPNSTD
SSAALYLDEHGDLMVEDHMQVHMSMLFSAIPTGTAKHYSIYRFKRISD
>Mature_208_residues
MRLRTLFVTTASIACCGCLHSPPSYPGAGGKNLEPASYASSLCPDLSGRYEGRGLLVDGDTVTRQAQQSLRIDYAFPFKD
ALEAGELQAAETGRYPQSGAINWSDRRATVTLAFASGQPVEYISSMEDKDRFVCTGRNGKIVWGGGSGTGRSEFGPNSTD
SSAALYLDEHGDLMVEDHMQVHMSMLFSAIPTGTAKHYSIYRFKRISD

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 22536; Mature: 22536

Theoretical pI: Translated: 6.35; Mature: 6.35

Prosite motif: PS00013 PROKAR_LIPOPROTEIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.4 %Cys     (Translated Protein)
2.9 %Met     (Translated Protein)
5.3 %Cys+Met (Translated Protein)
2.4 %Cys     (Mature Protein)
2.9 %Met     (Mature Protein)
5.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRLRTLFVTTASIACCGCLHSPPSYPGAGGKNLEPASYASSLCPDLSGRYEGRGLLVDGD
CCEEEEEEEHHHHHHHHHCCCCCCCCCCCCCCCCHHHHHHHHCCCCCCCCCCCEEEEECH
TVTRQAQQSLRIDYAFPFKDALEAGELQAAETGRYPQSGAINWSDRRATVTLAFASGQPV
HHHHHHHHHEEEEEECCHHHHHCCCCEEHHHCCCCCCCCCCCCCCCEEEEEEEEECCCCH
EYISSMEDKDRFVCTGRNGKIVWGGGSGTGRSEFGPNSTDSSAALYLDEHGDLMVEDHMQ
HHHHCCCCCCCEEEECCCCEEEEECCCCCCCCCCCCCCCCCCEEEEEECCCCEEEHHHHH
VHMSMLFSAIPTGTAKHYSIYRFKRISD
HHHHHHHHHCCCCCCCCEEEEEEEECCC
>Mature Secondary Structure
MRLRTLFVTTASIACCGCLHSPPSYPGAGGKNLEPASYASSLCPDLSGRYEGRGLLVDGD
CCEEEEEEEHHHHHHHHHCCCCCCCCCCCCCCCCHHHHHHHHCCCCCCCCCCCEEEEECH
TVTRQAQQSLRIDYAFPFKDALEAGELQAAETGRYPQSGAINWSDRRATVTLAFASGQPV
HHHHHHHHHEEEEEECCHHHHHCCCCEEHHHCCCCCCCCCCCCCCCEEEEEEEEECCCCH
EYISSMEDKDRFVCTGRNGKIVWGGGSGTGRSEFGPNSTDSSAALYLDEHGDLMVEDHMQ
HHHHCCCCCCCEEEECCCCEEEEECCCCCCCCCCCCCCCCCCEEEEEECCCCEEEHHHHH
VHMSMLFSAIPTGTAKHYSIYRFKRISD
HHHHHHHHHCCCCCCCCEEEEEEEECCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA