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The map label for this gene is yoeC [H]

Identifier: 186477137

GI number: 186477137

Start: 2682018

End: 2682644

Strand: Reverse

Name: yoeC [H]

Synonym: Bphy_2386

Alternate gene names: 186477137

Gene position: 2682644-2682018 (Counterclockwise)

Preceding gene: 186477138

Following gene: 186477136

Centisome position: 77.11

GC content: 56.3

Gene sequence:

>627_bases
ATGGAACCGCTTAATTCTTCCGGCGCTCGTCGGGTGCCGTGGAACAAGGGGAGGCTAACCGGCCAGAAGCCTCCGCTGAA
GCTTCGAGAAATCTGGGCAATTCGAACGAGGCTGCAGATGTCGTCCAACGCTCGCGAGTTGGCGATGTTCAACCTTGCGA
TCGACAGTAAGCTTCGAGCGTGCGATTTAACGCGCCTGCAAGTGCAGGACGTCTACATGGGAGGTCATGTGGTAGCTCGC
GCGACTTTCATGCAGCAGAAAACGCGTCGACCAGTGCAGTTCGAAATCACGGAGCAGACTCGTCAAAGTGTCTCTGCCTG
GATTTCGGCGCGGGGATTGAAGCCTGCCGACTATTTGTTTCCAAGTCAACTGCATGCCTCAGCGCACGTGTCGACGCGCC
AGTATGCGCGCATCGTTCATCGTTGGGTCGCGTCGATCGGGCTCGATGACACCGCGTACGGTACGCACACCATGCGACGA
ACGAAAGCGTCGTTGATCTATCGACGCACTAAGAACTTGCGCGCGGTCCAACTGCTCTTGGGCCATACAAAAATCGAAAG
CACCGTGCGATATCTCGGGATCGAGGTAGACGATGCTCTCGAAATGGCTGAGCAAACCGAAGTGTGA

Upstream 100 bases:

>100_bases
AATGTCTGCTCTGGAGCAGATCGAAAGTCCGCTCCGGGTCGAAGATTGACCACTCCACCAAGCGCAGAATCGATCTCCCT
TCGTTGAAGAGGAGATTGTC

Downstream 100 bases:

>100_bases
TCACCGGTGGCCGGCGAGCGTGCGCTTGTCGGCCAATTCCGGTCCCTGGCGGATCCGGGAAATGTGTCCGTTGCGAGTTC
GGGACCAGCCGGTGAGGATG

Product: integrase family protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 208; Mature: 208

Protein sequence:

>208_residues
MEPLNSSGARRVPWNKGRLTGQKPPLKLREIWAIRTRLQMSSNARELAMFNLAIDSKLRACDLTRLQVQDVYMGGHVVAR
ATFMQQKTRRPVQFEITEQTRQSVSAWISARGLKPADYLFPSQLHASAHVSTRQYARIVHRWVASIGLDDTAYGTHTMRR
TKASLIYRRTKNLRAVQLLLGHTKIESTVRYLGIEVDDALEMAEQTEV

Sequences:

>Translated_208_residues
MEPLNSSGARRVPWNKGRLTGQKPPLKLREIWAIRTRLQMSSNARELAMFNLAIDSKLRACDLTRLQVQDVYMGGHVVAR
ATFMQQKTRRPVQFEITEQTRQSVSAWISARGLKPADYLFPSQLHASAHVSTRQYARIVHRWVASIGLDDTAYGTHTMRR
TKASLIYRRTKNLRAVQLLLGHTKIESTVRYLGIEVDDALEMAEQTEV
>Mature_208_residues
MEPLNSSGARRVPWNKGRLTGQKPPLKLREIWAIRTRLQMSSNARELAMFNLAIDSKLRACDLTRLQVQDVYMGGHVVAR
ATFMQQKTRRPVQFEITEQTRQSVSAWISARGLKPADYLFPSQLHASAHVSTRQYARIVHRWVASIGLDDTAYGTHTMRR
TKASLIYRRTKNLRAVQLLLGHTKIESTVRYLGIEVDDALEMAEQTEV

Specific function: Unknown

COG id: COG0582

COG function: function code L; Integrase

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the 'phage' integrase family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR011010
- InterPro:   IPR013762
- InterPro:   IPR002104 [H]

Pfam domain/function: PF00589 Phage_integrase [H]

EC number: NA

Molecular weight: Translated: 23774; Mature: 23774

Theoretical pI: Translated: 11.06; Mature: 11.06

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
3.4 %Met     (Translated Protein)
3.8 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
3.4 %Met     (Mature Protein)
3.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MEPLNSSGARRVPWNKGRLTGQKPPLKLREIWAIRTRLQMSSNARELAMFNLAIDSKLRA
CCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCHHHEEEEHHHCCCHHH
CDLTRLQVQDVYMGGHVVARATFMQQKTRRPVQFEITEQTRQSVSAWISARGLKPADYLF
CCHHHEEEEHEEECCHHHHHHHHHHHHHCCCEEEEEHHHHHHHHHHHHHHCCCCHHHHCC
PSQLHASAHVSTRQYARIVHRWVASIGLDDTAYGTHTMRRTKASLIYRRTKNLRAVQLLL
CHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHCCHHHHHHHH
GHTKIESTVRYLGIEVDDALEMAEQTEV
HHHHHHHHHHHHCCCHHHHHHHHHHCCC
>Mature Secondary Structure
MEPLNSSGARRVPWNKGRLTGQKPPLKLREIWAIRTRLQMSSNARELAMFNLAIDSKLRA
CCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCHHHEEEEHHHCCCHHH
CDLTRLQVQDVYMGGHVVARATFMQQKTRRPVQFEITEQTRQSVSAWISARGLKPADYLF
CCHHHEEEEHEEECCHHHHHHHHHHHHHCCCEEEEEHHHHHHHHHHHHHHCCCCHHHHCC
PSQLHASAHVSTRQYARIVHRWVASIGLDDTAYGTHTMRRTKASLIYRRTKNLRAVQLLL
CHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHCCHHHHHHHH
GHTKIESTVRYLGIEVDDALEMAEQTEV
HHHHHHHHHHHHCCCHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9384377 [H]