| Definition | Burkholderia phymatum STM815 chromosome chromosome 1, complete sequence. |
|---|---|
| Accession | NC_010622 |
| Length | 3,479,187 |
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The map label for this gene is nasA [H]
Identifier: 186477088
GI number: 186477088
Start: 2621040
End: 2622437
Strand: Reverse
Name: nasA [H]
Synonym: Bphy_2337
Alternate gene names: 186477088
Gene position: 2622437-2621040 (Counterclockwise)
Preceding gene: 186477089
Following gene: 186477087
Centisome position: 75.37
GC content: 65.59
Gene sequence:
>1398_bases ATGAAAAACCTGTTGAATTCGCTTGCGAGCGGTAACTGGCGCGCGCTGCTCGCGTGCTTCCTTTACTTCGATACCGGCTT CACCGTCTGGGTCATGTTCGGGCCGCTGGCGCCGTTCATCAACAAGAGTATCGCGATGTCGCCCGCGGAACTGGGCTTTC TCGTCGCGGTGCCCGTGCTCGGCGCGGCAATCCTGCGCGTGACGCTTGGCAATCTCTATCAGGCTTGCGACGGTCGACGC GTGGCGCTGATGGGCGTCGCGCTGTCAGCGATTCCTTCGATCGTGCTGCTGCTGATGCCAGGCGCGCCGTCATACACGCT GCTGCTGATTCTCGGCGTGTTTCTCGGCGTCGGCGGGGCGAGCTTCGCGGTCGCGTTGCCGATGGCAGGCAGCAACTATC CGCCGAAAGTGCAAGGCCTGGTGCTCGGCCTCGCGGCCGCGGGCAACATCGGCGCGGTGCTGGACGGCTTCATGTTCCCG GCGCTTGCCGATCATTTCGGCTGGGCGAAGGCTGCGGGCGCCGCGCTGCCGCTGCTGGGCCTCGCTGCCGTCGCGCTGTT CTTCTGGGCCAGGGATCTCGGGCAGAAAACGGGCAGCGGCGCACAGGCGCTGCGCAGCTTCATCGTGACGCTCGCGGGTC TCGTTGCGCTCGTCGTCGCCGTGCATGCGGGCGTGTTCGGCGCGGGCAAGACGGGTGTGCTGCTGCTGCCCGTGCTCGGC GCGCTGCTCGCGATTGCCGTGCTGCCGAAGCACTATCGCAGCGTGCTCGTCGAAGGCGACACGTGGGTCGTGATGCTGGT CTACAGCATTACGTTCGGCGGCTTTGTCGGCATGTCCTCGTATGTGACGACACTGCTGATCTCGCTGTATCAGATGCCGC GTCTCGAAGCCGGACTCTTCATGTCGCTGCTCGCGTGTATCGGTGCGCTTGTGCGTCCCATCGGCGGGCTGGTCGCGGAT CGCATTTCGGGTGTGCGTGCGCTGGTGATTCTGCTCGCGGCGATCTCGCTGTGCGACTTCCTGTTCGCTGCATGGATGCC GCCCGTTTCCGCTGGCATCGCCTTGCTGATCGCGATGTATGTGTGCTTCGGTCTCGGCAACGGCGCGACGTTCCAGCTCG TGCCGCAGCGCTGGAAGGGCAAGACGGGCCTGATGTCGGGCATCGTCGGCGCGGCGGGCGGTATTGGCGGGTTCTATCTG CCCGTGATCATGGGCATCGCGAAGGAAGGCACGGGCAGCTATCAGATGGGCTTCGCGACGTTCGGCGTGCTGTCGGCGCT CGCGTTCGGTCTGGTCGTGCTGCATCGCGCGCGCTGGCTCGAGTGGGCGCTGCCGAAGGAAAGTGCGGTGGTGATCGAGC CGATCCGCGCGGGCATCAGCGTGGATAGCGGAGCTTGA
Upstream 100 bases:
>100_bases TCGCGTTCTCGCGTCAACACGCGCAGTCCCCAACGCATTTGCACCTAGTTGTTTGCCCGACCCCCGCACCAGCCCTGCTT TCGTTCAATGAGAGAGACCG
Downstream 100 bases:
>100_bases CGTCCCCGGTTGTGCGCGTTGTCGATAATCGCCAGCACCTCGCGTGCTGGCGATTTTTTTTCTGGGGCGTGCGGATAAGT GGCGTGGATGTCATCCACCC
Product: major facilitator transporter
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 465; Mature: 465
Protein sequence:
>465_residues MKNLLNSLASGNWRALLACFLYFDTGFTVWVMFGPLAPFINKSIAMSPAELGFLVAVPVLGAAILRVTLGNLYQACDGRR VALMGVALSAIPSIVLLLMPGAPSYTLLLILGVFLGVGGASFAVALPMAGSNYPPKVQGLVLGLAAAGNIGAVLDGFMFP ALADHFGWAKAAGAALPLLGLAAVALFFWARDLGQKTGSGAQALRSFIVTLAGLVALVVAVHAGVFGAGKTGVLLLPVLG ALLAIAVLPKHYRSVLVEGDTWVVMLVYSITFGGFVGMSSYVTTLLISLYQMPRLEAGLFMSLLACIGALVRPIGGLVAD RISGVRALVILLAAISLCDFLFAAWMPPVSAGIALLIAMYVCFGLGNGATFQLVPQRWKGKTGLMSGIVGAAGGIGGFYL PVIMGIAKEGTGSYQMGFATFGVLSALAFGLVVLHRARWLEWALPKESAVVIEPIRAGISVDSGA
Sequences:
>Translated_465_residues MKNLLNSLASGNWRALLACFLYFDTGFTVWVMFGPLAPFINKSIAMSPAELGFLVAVPVLGAAILRVTLGNLYQACDGRR VALMGVALSAIPSIVLLLMPGAPSYTLLLILGVFLGVGGASFAVALPMAGSNYPPKVQGLVLGLAAAGNIGAVLDGFMFP ALADHFGWAKAAGAALPLLGLAAVALFFWARDLGQKTGSGAQALRSFIVTLAGLVALVVAVHAGVFGAGKTGVLLLPVLG ALLAIAVLPKHYRSVLVEGDTWVVMLVYSITFGGFVGMSSYVTTLLISLYQMPRLEAGLFMSLLACIGALVRPIGGLVAD RISGVRALVILLAAISLCDFLFAAWMPPVSAGIALLIAMYVCFGLGNGATFQLVPQRWKGKTGLMSGIVGAAGGIGGFYL PVIMGIAKEGTGSYQMGFATFGVLSALAFGLVVLHRARWLEWALPKESAVVIEPIRAGISVDSGA >Mature_465_residues MKNLLNSLASGNWRALLACFLYFDTGFTVWVMFGPLAPFINKSIAMSPAELGFLVAVPVLGAAILRVTLGNLYQACDGRR VALMGVALSAIPSIVLLLMPGAPSYTLLLILGVFLGVGGASFAVALPMAGSNYPPKVQGLVLGLAAAGNIGAVLDGFMFP ALADHFGWAKAAGAALPLLGLAAVALFFWARDLGQKTGSGAQALRSFIVTLAGLVALVVAVHAGVFGAGKTGVLLLPVLG ALLAIAVLPKHYRSVLVEGDTWVVMLVYSITFGGFVGMSSYVTTLLISLYQMPRLEAGLFMSLLACIGALVRPIGGLVAD RISGVRALVILLAAISLCDFLFAAWMPPVSAGIALLIAMYVCFGLGNGATFQLVPQRWKGKTGLMSGIVGAAGGIGGFYL PVIMGIAKEGTGSYQMGFATFGVLSALAFGLVVLHRARWLEWALPKESAVVIEPIRAGISVDSGA
Specific function: May function as a nitrate transporter [H]
COG id: COG2223
COG function: function code P; Nitrate/nitrite transporter
Gene ontology:
Cell location: Cell membrane; Multi-pass membrane protein [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the major facilitator superfamily. Nitrate/nitrite porter (TC 2.A.1.8) family [H]
Homologues:
Organism=Escherichia coli, GI1787475, Length=192, Percent_Identity=28.125, Blast_Score=64, Evalue=2e-11,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR020846 - InterPro: IPR011701 - InterPro: IPR016196 - InterPro: IPR004737 [H]
Pfam domain/function: PF07690 MFS_1 [H]
EC number: NA
Molecular weight: Translated: 48074; Mature: 48074
Theoretical pI: Translated: 9.75; Mature: 9.75
Prosite motif: PS50850 MFS
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.1 %Cys (Translated Protein) 3.4 %Met (Translated Protein) 4.5 %Cys+Met (Translated Protein) 1.1 %Cys (Mature Protein) 3.4 %Met (Mature Protein) 4.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKNLLNSLASGNWRALLACFLYFDTGFTVWVMFGPLAPFINKSIAMSPAELGFLVAVPVL CHHHHHHHHCCCHHHHHHHHHHHHCCCEEEHHHHHHHHHHCCHHCCCHHHHHHHHHHHHH GAAILRVTLGNLYQACDGRRVALMGVALSAIPSIVLLLMPGAPSYTLLLILGVFLGVGGA HHHHHHHHHHHHHHHCCCCEEHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHCCCCC SFAVALPMAGSNYPPKVQGLVLGLAAAGNIGAVLDGFMFPALADHFGWAKAAGAALPLLG HHHEEECCCCCCCCCCHHHHHHHHHHCCCHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHH LAAVALFFWARDLGQKTGSGAQALRSFIVTLAGLVALVVAVHAGVFGAGKTGVLLLPVLG HHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHH ALLAIAVLPKHYRSVLVEGDTWVVMLVYSITFGGFVGMSSYVTTLLISLYQMPRLEAGLF HHHHHHHHHHHHHHHEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHH MSLLACIGALVRPIGGLVADRISGVRALVILLAAISLCDFLFAAWMPPVSAGIALLIAMY HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHH VCFGLGNGATFQLVPQRWKGKTGLMSGIVGAAGGIGGFYLPVIMGIAKEGTGSYQMGFAT HHHCCCCCCEEEECCHHHCCCHHHHHHHHHHCCCCHHHHHHHHHHHHCCCCCCEEHHHHH FGVLSALAFGLVVLHRARWLEWALPKESAVVIEPIRAGISVDSGA HHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEHHHCCCCCCCCC >Mature Secondary Structure MKNLLNSLASGNWRALLACFLYFDTGFTVWVMFGPLAPFINKSIAMSPAELGFLVAVPVL CHHHHHHHHCCCHHHHHHHHHHHHCCCEEEHHHHHHHHHHCCHHCCCHHHHHHHHHHHHH GAAILRVTLGNLYQACDGRRVALMGVALSAIPSIVLLLMPGAPSYTLLLILGVFLGVGGA HHHHHHHHHHHHHHHCCCCEEHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHCCCCC SFAVALPMAGSNYPPKVQGLVLGLAAAGNIGAVLDGFMFPALADHFGWAKAAGAALPLLG HHHEEECCCCCCCCCCHHHHHHHHHHCCCHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHH LAAVALFFWARDLGQKTGSGAQALRSFIVTLAGLVALVVAVHAGVFGAGKTGVLLLPVLG HHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHH ALLAIAVLPKHYRSVLVEGDTWVVMLVYSITFGGFVGMSSYVTTLLISLYQMPRLEAGLF HHHHHHHHHHHHHHHEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHH MSLLACIGALVRPIGGLVADRISGVRALVILLAAISLCDFLFAAWMPPVSAGIALLIAMY HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHH VCFGLGNGATFQLVPQRWKGKTGLMSGIVGAAGGIGGFYLPVIMGIAKEGTGSYQMGFAT HHHCCCCCCEEEECCHHHCCCHHHHHHHHHHCCCCHHHHHHHHHHHHCCCCCCEEHHHHH FGVLSALAFGLVVLHRARWLEWALPKESAVVIEPIRAGISVDSGA HHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEHHHCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 7868621; 8969502; 9384377 [H]