| Definition | Burkholderia phymatum STM815 chromosome chromosome 1, complete sequence. |
|---|---|
| Accession | NC_010622 |
| Length | 3,479,187 |
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The map label for this gene is 186477061
Identifier: 186477061
GI number: 186477061
Start: 2595141
End: 2596115
Strand: Reverse
Name: 186477061
Synonym: Bphy_2310
Alternate gene names: NA
Gene position: 2596115-2595141 (Counterclockwise)
Preceding gene: 186477062
Following gene: 186477060
Centisome position: 74.62
GC content: 60.1
Gene sequence:
>975_bases GTGACCGTCGACGTCATTCCTTTTGAACCAGCATTGAGGGACGCGTGGGACACCTTCTGCACGAACGCGGTCAACAGTAC GTTCCTGCATACGCGCCGTTTTCTCGGCTACCACGGCGACCGGTTTAACGACGTTTCAGCCTTGCTGACGCAGGGCGGTG TCATCGTCGGCGTGTTTGCGGCGGCGCAGGCGCCTGCCGATCGCGCGATGGTCGTGAGCCATCCGGGCATTACTTACGGC GGTGTAGTCCATGACGGTGCCCTGTCCGGGGGCAAAATGATCGAAGCGATGGATAAGTTGTGTGCGCATTATCGGGGGAG GGGATACGAACGTCTGAGGTACAAGGCGGTTCCCCATGTGTATCAGGCCAGGCCGTCGCAGGACGACCTGTATGCGTTGT TCCGCATCGGCGCGCGTCGTACCCGCTGCGACCTGTCATGCGCGATCGATCTGTACGATCGCGCGAAGCCTGCCGAGCGG CGTCGGCGCGGGCTCAAAAAGGCGCTCAAGTCGGTGACGGTGCAGGCAGGTAGTGCGCAACTGCGGCCTTTGTGGGGTGT GCTAATGGACAACCTGGCTCGCAAGCACGACGCGGCTCCCGTCCATAGCACGGAGGAGATGGAACAATTGGCCGGGCTGT TCCCCGAAGCGATTGAGTTTTTTTGCGCCACGATGGATGGGCGGGTCGAAGCAGGTGTCGTGGTGTTCAAGACGCGTACG GCATGGCACGCGCAGTACATCGCGGCAAGTGCGGCGGCCTATTCGGTTTCCGCGCTTGATGCCATCTTTGACCATGCAAT TGCCGGGGCCAAAGCCGCTGGAGTGCGGTATTTCGACTTCGGTACGAGCAACGAGAGTGAGGGCACGGTGCTGAATGAAA GCCTCTACCAGTACAAGCATGAGTATGGAGGTGGAGGCGCCGTGCACGAGTTTTACGACGTCGATTTATTAGGTGCTCAG AATGCCGGTGTCTGA
Upstream 100 bases:
>100_bases ATATTCTCGGCAATACCGAGCCGGATTGCATTTTCAAGGGTGAGCAGCCTCAGGCCGCGAAGGTGTCGGCGCGCAGGTTT TTTAAGGTAAAGGCATAGAA
Downstream 100 bases:
>100_bases TTGCAAGATTATTGAATTCCCCAAGATCGCAGACCCGAGGGGAAATCTGACCTTTCTCGAAGGTGGCCGCCATGTGCCCT TCGACATCAAGCGAATCTTC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 324; Mature: 323
Protein sequence:
>324_residues MTVDVIPFEPALRDAWDTFCTNAVNSTFLHTRRFLGYHGDRFNDVSALLTQGGVIVGVFAAAQAPADRAMVVSHPGITYG GVVHDGALSGGKMIEAMDKLCAHYRGRGYERLRYKAVPHVYQARPSQDDLYALFRIGARRTRCDLSCAIDLYDRAKPAER RRRGLKKALKSVTVQAGSAQLRPLWGVLMDNLARKHDAAPVHSTEEMEQLAGLFPEAIEFFCATMDGRVEAGVVVFKTRT AWHAQYIAASAAAYSVSALDAIFDHAIAGAKAAGVRYFDFGTSNESEGTVLNESLYQYKHEYGGGGAVHEFYDVDLLGAQ NAGV
Sequences:
>Translated_324_residues MTVDVIPFEPALRDAWDTFCTNAVNSTFLHTRRFLGYHGDRFNDVSALLTQGGVIVGVFAAAQAPADRAMVVSHPGITYG GVVHDGALSGGKMIEAMDKLCAHYRGRGYERLRYKAVPHVYQARPSQDDLYALFRIGARRTRCDLSCAIDLYDRAKPAER RRRGLKKALKSVTVQAGSAQLRPLWGVLMDNLARKHDAAPVHSTEEMEQLAGLFPEAIEFFCATMDGRVEAGVVVFKTRT AWHAQYIAASAAAYSVSALDAIFDHAIAGAKAAGVRYFDFGTSNESEGTVLNESLYQYKHEYGGGGAVHEFYDVDLLGAQ NAGV >Mature_323_residues TVDVIPFEPALRDAWDTFCTNAVNSTFLHTRRFLGYHGDRFNDVSALLTQGGVIVGVFAAAQAPADRAMVVSHPGITYGG VVHDGALSGGKMIEAMDKLCAHYRGRGYERLRYKAVPHVYQARPSQDDLYALFRIGARRTRCDLSCAIDLYDRAKPAERR RRGLKKALKSVTVQAGSAQLRPLWGVLMDNLARKHDAAPVHSTEEMEQLAGLFPEAIEFFCATMDGRVEAGVVVFKTRTA WHAQYIAASAAAYSVSALDAIFDHAIAGAKAAGVRYFDFGTSNESEGTVLNESLYQYKHEYGGGGAVHEFYDVDLLGAQN AGV
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 35387; Mature: 35256
Theoretical pI: Translated: 7.37; Mature: 7.37
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.5 %Cys (Translated Protein) 2.2 %Met (Translated Protein) 3.7 %Cys+Met (Translated Protein) 1.5 %Cys (Mature Protein) 1.9 %Met (Mature Protein) 3.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTVDVIPFEPALRDAWDTFCTNAVNSTFLHTRRFLGYHGDRFNDVSALLTQGGVIVGVFA CEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHCCCEEEEEEH AAQAPADRAMVVSHPGITYGGVVHDGALSGGKMIEAMDKLCAHYRGRGYERLRYKAVPHV HHCCCCCCEEEEECCCCCCCCEEECCCCCCCHHHHHHHHHHHHHCCCCHHHHHHHHCCHH YQARPSQDDLYALFRIGARRTRCDLSCAIDLYDRAKPAERRRRGLKKALKSVTVQAGSAQ HHCCCCCHHHHHHHHHCCCCCCCCCEEEEEHHHCCCHHHHHHHHHHHHHHHHHHCCCCCH LRPLWGVLMDNLARKHDAAPVHSTEEMEQLAGLFPEAIEFFCATMDGRVEAGVVVFKTRT HHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHCCCHHHHHHHHHHCCCCEECCEEEEEECC AWHAQYIAASAAAYSVSALDAIFDHAIAGAKAAGVRYFDFGTSNESEGTVLNESLYQYKH HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHCCEEEEECCCCCCCCCCCHHHHHHHHHH EYGGGGAVHEFYDVDLLGAQNAGV HCCCCCCCHHEECEEEECCCCCCC >Mature Secondary Structure TVDVIPFEPALRDAWDTFCTNAVNSTFLHTRRFLGYHGDRFNDVSALLTQGGVIVGVFA EEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHCCCEEEEEEH AAQAPADRAMVVSHPGITYGGVVHDGALSGGKMIEAMDKLCAHYRGRGYERLRYKAVPHV HHCCCCCCEEEEECCCCCCCCEEECCCCCCCHHHHHHHHHHHHHCCCCHHHHHHHHCCHH YQARPSQDDLYALFRIGARRTRCDLSCAIDLYDRAKPAERRRRGLKKALKSVTVQAGSAQ HHCCCCCHHHHHHHHHCCCCCCCCCEEEEEHHHCCCHHHHHHHHHHHHHHHHHHCCCCCH LRPLWGVLMDNLARKHDAAPVHSTEEMEQLAGLFPEAIEFFCATMDGRVEAGVVVFKTRT HHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHCCCHHHHHHHHHHCCCCEECCEEEEEECC AWHAQYIAASAAAYSVSALDAIFDHAIAGAKAAGVRYFDFGTSNESEGTVLNESLYQYKH HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHCCEEEEECCCCCCCCCCCHHHHHHHHHH EYGGGGAVHEFYDVDLLGAQNAGV HCCCCCCCHHEECEEEECCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA