Definition Burkholderia phymatum STM815 chromosome chromosome 1, complete sequence.
Accession NC_010622
Length 3,479,187

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The map label for this gene is 186477060

Identifier: 186477060

GI number: 186477060

Start: 2594744

End: 2595154

Strand: Reverse

Name: 186477060

Synonym: Bphy_2309

Alternate gene names: NA

Gene position: 2595154-2594744 (Counterclockwise)

Preceding gene: 186477061

Following gene: 186477059

Centisome position: 74.59

GC content: 54.26

Gene sequence:

>411_bases
ATGCCGGTGTCTGATTGCAAGATTATTGAATTCCCCAAGATCGCAGACCCGAGGGGAAATCTGACCTTTCTCGAAGGTGG
CCGCCATGTGCCCTTCGACATCAAGCGAATCTTCTACCTGTACGATATTCCGACGGGTGCGGCTCGCGGCGCGCATGCGC
ACAAGCAATTGCATCAGTTGTTGATCTGCCTGTCCGGCAGTTTCGATGTTGCACTCGACGACGGGTCGGAAAAGACGATG
GTTCACCTGAATCGTCCGTGGCAAGGGCTGCATATCCCACCCATGATCTGGGCGGCCGAATTGAATTTCGATCCGGGTTC
GGTTTGCCTGGTTTTGGCGTCGATGGAGTTCAACGAGTCTGATTATTATCGGGACTACGACGACTATCTGGCTGCGGTGC
GTTCTCGTTGA

Upstream 100 bases:

>100_bases
GGCACGGTGCTGAATGAAAGCCTCTACCAGTACAAGCATGAGTATGGAGGTGGAGGCGCCGTGCACGAGTTTTACGACGT
CGATTTATTAGGTGCTCAGA

Downstream 100 bases:

>100_bases
ATTATCTTGCGAGTGGAGTGAGCGATGTCTGTTGCCGTGACATTGCCGCCGGAGTAAGTTTATTCGAGAGTAAGGATCAC
AATTGTGAAAGTGCCATTCC

Product: WxcM domain-containing protein

Products: NA

Alternate protein names: WxcM Domain Protein; WxcM-Like Protein; Bifunctional Acetyl Transferase/Isomerase; Lipopolysaccharide Biosynthesis Protein; WxcM-Like; WblP Protein; WxcM Domain Protein Domain Protein; Sugar Isomerase; FdtA-Like Protein; Isomerase; DTDP-6-Deoxy-3 4-Keto-Hexulose Isomerase; Acetyl Transferase/Isomerase; Wxcm-Like DomaiN-Containing Protein; WxcM-Like Domain-Containing Protein; NDP-Hexose Isomerase; Polysaccharide Glycan Isomerase

Number of amino acids: Translated: 136; Mature: 135

Protein sequence:

>136_residues
MPVSDCKIIEFPKIADPRGNLTFLEGGRHVPFDIKRIFYLYDIPTGAARGAHAHKQLHQLLICLSGSFDVALDDGSEKTM
VHLNRPWQGLHIPPMIWAAELNFDPGSVCLVLASMEFNESDYYRDYDDYLAAVRSR

Sequences:

>Translated_136_residues
MPVSDCKIIEFPKIADPRGNLTFLEGGRHVPFDIKRIFYLYDIPTGAARGAHAHKQLHQLLICLSGSFDVALDDGSEKTM
VHLNRPWQGLHIPPMIWAAELNFDPGSVCLVLASMEFNESDYYRDYDDYLAAVRSR
>Mature_135_residues
PVSDCKIIEFPKIADPRGNLTFLEGGRHVPFDIKRIFYLYDIPTGAARGAHAHKQLHQLLICLSGSFDVALDDGSEKTMV
HLNRPWQGLHIPPMIWAAELNFDPGSVCLVLASMEFNESDYYRDYDDYLAAVRSR

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 15410; Mature: 15279

Theoretical pI: Translated: 5.90; Mature: 5.90

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.2 %Cys     (Translated Protein)
2.9 %Met     (Translated Protein)
5.1 %Cys+Met (Translated Protein)
2.2 %Cys     (Mature Protein)
2.2 %Met     (Mature Protein)
4.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPVSDCKIIEFPKIADPRGNLTFLEGGRHVPFDIKRIFYLYDIPTGAARGAHAHKQLHQL
CCCCCCEEEECCCCCCCCCCEEEEECCCCCCEEHEEEEEEEECCCCCCCCCHHHHHHHHH
LICLSGSFDVALDDGSEKTMVHLNRPWQGLHIPPMIWAAELNFDPGSVCLVLASMEFNES
HHHCCCCCEEEEECCCCCEEEEECCCCCCCCCCCEEEEEEECCCCCCEEEEEEECCCCCC
DYYRDYDDYLAAVRSR
CCCCCHHHHHHHHHCC
>Mature Secondary Structure 
PVSDCKIIEFPKIADPRGNLTFLEGGRHVPFDIKRIFYLYDIPTGAARGAHAHKQLHQL
CCCCCEEEECCCCCCCCCCEEEEECCCCCCEEHEEEEEEEECCCCCCCCCHHHHHHHHH
LICLSGSFDVALDDGSEKTMVHLNRPWQGLHIPPMIWAAELNFDPGSVCLVLASMEFNES
HHHCCCCCEEEEECCCCCEEEEECCCCCCCCCCCEEEEEEECCCCCCEEEEEEECCCCCC
DYYRDYDDYLAAVRSR
CCCCCHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA