| Definition | Burkholderia phymatum STM815 chromosome chromosome 1, complete sequence. |
|---|---|
| Accession | NC_010622 |
| Length | 3,479,187 |
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The map label for this gene is 186477060
Identifier: 186477060
GI number: 186477060
Start: 2594744
End: 2595154
Strand: Reverse
Name: 186477060
Synonym: Bphy_2309
Alternate gene names: NA
Gene position: 2595154-2594744 (Counterclockwise)
Preceding gene: 186477061
Following gene: 186477059
Centisome position: 74.59
GC content: 54.26
Gene sequence:
>411_bases ATGCCGGTGTCTGATTGCAAGATTATTGAATTCCCCAAGATCGCAGACCCGAGGGGAAATCTGACCTTTCTCGAAGGTGG CCGCCATGTGCCCTTCGACATCAAGCGAATCTTCTACCTGTACGATATTCCGACGGGTGCGGCTCGCGGCGCGCATGCGC ACAAGCAATTGCATCAGTTGTTGATCTGCCTGTCCGGCAGTTTCGATGTTGCACTCGACGACGGGTCGGAAAAGACGATG GTTCACCTGAATCGTCCGTGGCAAGGGCTGCATATCCCACCCATGATCTGGGCGGCCGAATTGAATTTCGATCCGGGTTC GGTTTGCCTGGTTTTGGCGTCGATGGAGTTCAACGAGTCTGATTATTATCGGGACTACGACGACTATCTGGCTGCGGTGC GTTCTCGTTGA
Upstream 100 bases:
>100_bases GGCACGGTGCTGAATGAAAGCCTCTACCAGTACAAGCATGAGTATGGAGGTGGAGGCGCCGTGCACGAGTTTTACGACGT CGATTTATTAGGTGCTCAGA
Downstream 100 bases:
>100_bases ATTATCTTGCGAGTGGAGTGAGCGATGTCTGTTGCCGTGACATTGCCGCCGGAGTAAGTTTATTCGAGAGTAAGGATCAC AATTGTGAAAGTGCCATTCC
Product: WxcM domain-containing protein
Products: NA
Alternate protein names: WxcM Domain Protein; WxcM-Like Protein; Bifunctional Acetyl Transferase/Isomerase; Lipopolysaccharide Biosynthesis Protein; WxcM-Like; WblP Protein; WxcM Domain Protein Domain Protein; Sugar Isomerase; FdtA-Like Protein; Isomerase; DTDP-6-Deoxy-3 4-Keto-Hexulose Isomerase; Acetyl Transferase/Isomerase; Wxcm-Like DomaiN-Containing Protein; WxcM-Like Domain-Containing Protein; NDP-Hexose Isomerase; Polysaccharide Glycan Isomerase
Number of amino acids: Translated: 136; Mature: 135
Protein sequence:
>136_residues MPVSDCKIIEFPKIADPRGNLTFLEGGRHVPFDIKRIFYLYDIPTGAARGAHAHKQLHQLLICLSGSFDVALDDGSEKTM VHLNRPWQGLHIPPMIWAAELNFDPGSVCLVLASMEFNESDYYRDYDDYLAAVRSR
Sequences:
>Translated_136_residues MPVSDCKIIEFPKIADPRGNLTFLEGGRHVPFDIKRIFYLYDIPTGAARGAHAHKQLHQLLICLSGSFDVALDDGSEKTM VHLNRPWQGLHIPPMIWAAELNFDPGSVCLVLASMEFNESDYYRDYDDYLAAVRSR >Mature_135_residues PVSDCKIIEFPKIADPRGNLTFLEGGRHVPFDIKRIFYLYDIPTGAARGAHAHKQLHQLLICLSGSFDVALDDGSEKTMV HLNRPWQGLHIPPMIWAAELNFDPGSVCLVLASMEFNESDYYRDYDDYLAAVRSR
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 15410; Mature: 15279
Theoretical pI: Translated: 5.90; Mature: 5.90
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.2 %Cys (Translated Protein) 2.9 %Met (Translated Protein) 5.1 %Cys+Met (Translated Protein) 2.2 %Cys (Mature Protein) 2.2 %Met (Mature Protein) 4.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPVSDCKIIEFPKIADPRGNLTFLEGGRHVPFDIKRIFYLYDIPTGAARGAHAHKQLHQL CCCCCCEEEECCCCCCCCCCEEEEECCCCCCEEHEEEEEEEECCCCCCCCCHHHHHHHHH LICLSGSFDVALDDGSEKTMVHLNRPWQGLHIPPMIWAAELNFDPGSVCLVLASMEFNES HHHCCCCCEEEEECCCCCEEEEECCCCCCCCCCCEEEEEEECCCCCCEEEEEEECCCCCC DYYRDYDDYLAAVRSR CCCCCHHHHHHHHHCC >Mature Secondary Structure PVSDCKIIEFPKIADPRGNLTFLEGGRHVPFDIKRIFYLYDIPTGAARGAHAHKQLHQL CCCCCEEEECCCCCCCCCCEEEEECCCCCCEEHEEEEEEEECCCCCCCCCHHHHHHHHH LICLSGSFDVALDDGSEKTMVHLNRPWQGLHIPPMIWAAELNFDPGSVCLVLASMEFNES HHHCCCCCEEEEECCCCCEEEEECCCCCCCCCCCEEEEEEECCCCCCEEEEEEECCCCCC DYYRDYDDYLAAVRSR CCCCCHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA