| Definition | Burkholderia phymatum STM815 chromosome chromosome 1, complete sequence. |
|---|---|
| Accession | NC_010622 |
| Length | 3,479,187 |
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The map label for this gene is eryC1 [H]
Identifier: 186477059
GI number: 186477059
Start: 2593562
End: 2594659
Strand: Reverse
Name: eryC1 [H]
Synonym: Bphy_2308
Alternate gene names: 186477059
Gene position: 2594659-2593562 (Counterclockwise)
Preceding gene: 186477060
Following gene: 186477058
Centisome position: 74.58
GC content: 58.29
Gene sequence:
>1098_bases GTGAAAGTGCCATTCCTTGATGTCCGCAGCGCCTATATTGAACTGAAGTCCGAGATCGATGAGGCCGTTTCTCGAGCGCT CGACTCCGGCTGGTATATCTTCGGGGAAGAGGTCGCACGATTTGAAAAGTCGTTTGCCGACTACACCGGTACCCGTTTCG CGATCGGCGTAGGCAATGGTCTCGATGCCCTGCGTATCGCCCTGATGGCGATGGGGGTGTCCGAAGGGGACGAAGTCATC GTTCCTTCCAACACCTATATCGCGACGTGGCTCGCGGTAACGCAGTGCGGCGCACGTCCGGTGCCTGTCGAGCCCGACGC AGACACGCTCAACATCGATCCGCGGCGCATCGAGCAGGCCATGACCAGTAAAACCAAGGTTATTCTGCCCGTGCATCTGT ATGGACTGCCAGCTGAAATGGGTCCGATCCTCGAACTGGCGCGTCGCAAAGGTGTGCGAGTCCTCGAAGACGGCGCGCAG GCACACGGTGCTCGCTACCGTGGTGAACTCATTGGCGGCCACGGCGATGCCGTCACGTGGAGTTTCTATCCTGGCAAAAA TCTCGGCGCATTCGGTGATGCGGGCGGTGTGACGACCAACGATGCAGAGCTCGCTGAGCGGATCCGGACCATTGCGAACT ACGGCTCGAAGGTGAAATACGTCAATGAGGTGTGTGGGGTGAATAGCAGGCTCGATCCGCTTCACGCCGCAGCACTGAAC GTCAAACTGCCGCATCTGGAGGAGTGGAACAGGCGTCGCGTGAAAATCGCGGAGTACTACCAGCGTCACCTGCAGAACAC GAGTGTGCGGGTTCCCGTTTCGCCTCCGGATTGCATGTCGTCATGGCATCTGTTCCCCGTCTTTTCGCAGCGGCGCGATG CGTTACAGTCGAGGCTGAAGGAGGCCGGAATCGAGACGCTGATTCACTACCCGATTCCACCGCATCTGCAACAGGCGTAC CACTTCCTCGGGTACGAAAAGGGCGACTTTCCTGTTGCCGAAGCAATGGCCGAGACCGAGTTGAGTCTGCCCATCGGCCC CCATATGACGCCTGAACAAGCAGCGTATGTTTGTGAAATTATCGCGGGTTTCGAGTAA
Upstream 100 bases:
>100_bases GGTGCGTTCTCGTTGAATTATCTTGCGAGTGGAGTGAGCGATGTCTGTTGCCGTGACATTGCCGCCGGAGTAAGTTTATT CGAGAGTAAGGATCACAATT
Downstream 100 bases:
>100_bases TGCAAGACTTTGATCTCGATCGATTGCATGAATCGGTCGCGAAATGCATTTCCCTATCGCAATACGACGACGCGATGGTG CGCATCAAATCGTTCGTTGA
Product: DegT/DnrJ/EryC1/StrS aminotransferase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 365; Mature: 365
Protein sequence:
>365_residues MKVPFLDVRSAYIELKSEIDEAVSRALDSGWYIFGEEVARFEKSFADYTGTRFAIGVGNGLDALRIALMAMGVSEGDEVI VPSNTYIATWLAVTQCGARPVPVEPDADTLNIDPRRIEQAMTSKTKVILPVHLYGLPAEMGPILELARRKGVRVLEDGAQ AHGARYRGELIGGHGDAVTWSFYPGKNLGAFGDAGGVTTNDAELAERIRTIANYGSKVKYVNEVCGVNSRLDPLHAAALN VKLPHLEEWNRRRVKIAEYYQRHLQNTSVRVPVSPPDCMSSWHLFPVFSQRRDALQSRLKEAGIETLIHYPIPPHLQQAY HFLGYEKGDFPVAEAMAETELSLPIGPHMTPEQAAYVCEIIAGFE
Sequences:
>Translated_365_residues MKVPFLDVRSAYIELKSEIDEAVSRALDSGWYIFGEEVARFEKSFADYTGTRFAIGVGNGLDALRIALMAMGVSEGDEVI VPSNTYIATWLAVTQCGARPVPVEPDADTLNIDPRRIEQAMTSKTKVILPVHLYGLPAEMGPILELARRKGVRVLEDGAQ AHGARYRGELIGGHGDAVTWSFYPGKNLGAFGDAGGVTTNDAELAERIRTIANYGSKVKYVNEVCGVNSRLDPLHAAALN VKLPHLEEWNRRRVKIAEYYQRHLQNTSVRVPVSPPDCMSSWHLFPVFSQRRDALQSRLKEAGIETLIHYPIPPHLQQAY HFLGYEKGDFPVAEAMAETELSLPIGPHMTPEQAAYVCEIIAGFE >Mature_365_residues MKVPFLDVRSAYIELKSEIDEAVSRALDSGWYIFGEEVARFEKSFADYTGTRFAIGVGNGLDALRIALMAMGVSEGDEVI VPSNTYIATWLAVTQCGARPVPVEPDADTLNIDPRRIEQAMTSKTKVILPVHLYGLPAEMGPILELARRKGVRVLEDGAQ AHGARYRGELIGGHGDAVTWSFYPGKNLGAFGDAGGVTTNDAELAERIRTIANYGSKVKYVNEVCGVNSRLDPLHAAALN VKLPHLEEWNRRRVKIAEYYQRHLQNTSVRVPVSPPDCMSSWHLFPVFSQRRDALQSRLKEAGIETLIHYPIPPHLQQAY HFLGYEKGDFPVAEAMAETELSLPIGPHMTPEQAAYVCEIIAGFE
Specific function: Sensor protein that transfers the signal of environmental stimuli to the regulatory region of target genes to activate or repress transcription of erythromycin biosynthesis genes (Potential) [H]
COG id: COG0399
COG function: function code M; Predicted pyridoxal phosphate-dependent enzyme apparently involved in regulation of cell wall biogenesis
Gene ontology:
Cell location: Cell membrane; Peripheral membrane protein (Potential) [H]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the degT/dnrJ/eryC1 family [H]
Homologues:
Organism=Escherichia coli, GI145693159, Length=361, Percent_Identity=35.7340720221607, Blast_Score=169, Evalue=3e-43, Organism=Escherichia coli, GI2367285, Length=305, Percent_Identity=32.4590163934426, Blast_Score=139, Evalue=4e-34,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR000653 - InterPro: IPR015424 - InterPro: IPR015421 - InterPro: IPR015422 [H]
Pfam domain/function: PF01041 DegT_DnrJ_EryC1 [H]
EC number: NA
Molecular weight: Translated: 40376; Mature: 40376
Theoretical pI: Translated: 5.97; Mature: 5.97
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.1 %Cys (Translated Protein) 2.2 %Met (Translated Protein) 3.3 %Cys+Met (Translated Protein) 1.1 %Cys (Mature Protein) 2.2 %Met (Mature Protein) 3.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKVPFLDVRSAYIELKSEIDEAVSRALDSGWYIFGEEVARFEKSFADYTGTRFAIGVGNG CCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCEEEHHHHHHHHHHHHHCCCCEEEEECCCC LDALRIALMAMGVSEGDEVIVPSNTYIATWLAVTQCGARPVPVEPDADTLNIDPRRIEQA HHHHHHHHHHHCCCCCCCEEECCCCHHHHHHHHHHCCCCCCCCCCCCCEECCCHHHHHHH MTSKTKVILPVHLYGLPAEMGPILELARRKGVRVLEDGAQAHGARYRGELIGGHGDAVTW HHCCCEEEEEEEEECCCHHHHHHHHHHHHCCCEEECCCHHHCCCCCCCEEECCCCCEEEE SFYPGKNLGAFGDAGGVTTNDAELAERIRTIANYGSKVKYVNEVCGVNSRLDPLHAAALN EECCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCHHHHHHHHHCCCCCCCCHHHHEEE VKLPHLEEWNRRRVKIAEYYQRHLQNTSVRVPVSPPDCMSSWHLFPVFSQRRDALQSRLK EECCCHHHHHHHHHHHHHHHHHHHCCCCEEEECCCHHHHHCCCEEHHHHHHHHHHHHHHH EAGIETLIHYPIPPHLQQAYHFLGYEKGDFPVAEAMAETELSLPIGPHMTPEQAAYVCEI HCCHHEEEECCCCHHHHHHHHHHCCCCCCCHHHHHHHHHCCCCCCCCCCCHHHHHHHHHH IAGFE HHCCC >Mature Secondary Structure MKVPFLDVRSAYIELKSEIDEAVSRALDSGWYIFGEEVARFEKSFADYTGTRFAIGVGNG CCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCEEEHHHHHHHHHHHHHCCCCEEEEECCCC LDALRIALMAMGVSEGDEVIVPSNTYIATWLAVTQCGARPVPVEPDADTLNIDPRRIEQA HHHHHHHHHHHCCCCCCCEEECCCCHHHHHHHHHHCCCCCCCCCCCCCEECCCHHHHHHH MTSKTKVILPVHLYGLPAEMGPILELARRKGVRVLEDGAQAHGARYRGELIGGHGDAVTW HHCCCEEEEEEEEECCCHHHHHHHHHHHHCCCEEECCCHHHCCCCCCCEEECCCCCEEEE SFYPGKNLGAFGDAGGVTTNDAELAERIRTIANYGSKVKYVNEVCGVNSRLDPLHAAALN EECCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCHHHHHHHHHCCCCCCCCHHHHEEE VKLPHLEEWNRRRVKIAEYYQRHLQNTSVRVPVSPPDCMSSWHLFPVFSQRRDALQSRLK EECCCHHHHHHHHHHHHHHHHHHHCCCCEEEECCCHHHHHCCCEEHHHHHHHHHHHHHHH EAGIETLIHYPIPPHLQQAYHFLGYEKGDFPVAEAMAETELSLPIGPHMTPEQAAYVCEI HCCHHEEEECCCCHHHHHHHHHHCCCCCCCHHHHHHHHHCCCCCCCCCCCHHHHHHHHHH IAGFE HHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 2575703 [H]